BLASTX nr result

ID: Scutellaria24_contig00029076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00029076
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003359382.1| ribosomal protein L20 (chloroplast) [Olea eu...   103   3e-20
gb|ADD30296.1| ribosomal protein L20 [Ehretia acuminata]              102   7e-20
ref|YP_004564027.1| ribosomal protein L20 [Olea woodiana subsp. ...   102   7e-20
gb|ADD30310.1| ribosomal protein L20 [Gunnera manicata]               101   9e-20
ref|YP_007317271.1| ribosomal protein L20 (chloroplast) [Camelli...   100   2e-19

>ref|YP_003359382.1| ribosomal protein L20 (chloroplast) [Olea europaea]
           gi|330850766|ref|YP_004376444.1| ribosomal protein L20
           [Olea europaea subsp. europaea]
           gi|334700305|ref|YP_004563804.1| ribosomal protein L20
           [Olea europaea subsp. cuspidata]
           gi|334701911|ref|YP_004564520.1| ribosomal protein L20
           [Olea europaea subsp. maroccana]
           gi|110456627|gb|ABG74754.1| ribosomal protein L20
           [Forsythia europaea] gi|281428710|gb|ADA69949.1|
           ribosomal protein L20 (chloroplast) [Olea europaea]
           gi|291059276|gb|ADD72112.1| ribosomal protein L20 [Olea
           europaea] gi|328795456|emb|CBR30338.1| ribosomal protein
           L20 [Olea europaea subsp. europaea]
           gi|334084424|emb|CBR23853.1| ribosomal protein L20 [Olea
           europaea subsp. cuspidata] gi|334084510|emb|CBR24646.1|
           ribosomal protein L20 [Olea europaea subsp. europaea]
           gi|334084596|emb|CBR30430.1| ribosomal protein L20 [Olea
           europaea subsp. europaea] gi|334084887|emb|CBS29265.1|
           ribosomal protein L20 [Olea europaea subsp. maroccana]
           gi|334084973|emb|CBJ04321.1| ribosomal protein L20 [Olea
           europaea subsp. cuspidata] gi|334085059|emb|CBR23762.1|
           ribosomal protein L20 [Olea europaea subsp. cuspidata]
          Length = 128

 Score =  103 bits (256), Expect = 3e-20
 Identities = 51/54 (94%), Positives = 52/54 (96%)
 Frame = +3

Query: 450 LFVSSFRGAHSRLTRTITQQKIRALVSAHRDRDKQKRNFRCLWITRLNAVIRER 611
           LF SSFRGAHSRLTRTITQQKIRALVSAHRDRDKQKRNFR LWITR+NAVIRER
Sbjct: 19  LFASSFRGAHSRLTRTITQQKIRALVSAHRDRDKQKRNFRRLWITRINAVIRER 72


>gb|ADD30296.1| ribosomal protein L20 [Ehretia acuminata]
          Length = 128

 Score =  102 bits (253), Expect = 7e-20
 Identities = 50/54 (92%), Positives = 52/54 (96%)
 Frame = +3

Query: 450 LFVSSFRGAHSRLTRTITQQKIRALVSAHRDRDKQKRNFRCLWITRLNAVIRER 611
           LF SSFRGAHSRLTRTITQQKIRALVSAHRDRD+QKRNFR LWITR+NAVIRER
Sbjct: 19  LFASSFRGAHSRLTRTITQQKIRALVSAHRDRDRQKRNFRRLWITRINAVIRER 72


>ref|YP_004564027.1| ribosomal protein L20 [Olea woodiana subsp. woodiana]
           gi|110456698|gb|ABG74807.1| ribosomal protein L20
           [Jasminum abyssinicum] gi|334084682|emb|CBS29375.1|
           ribosomal protein L20 [Olea woodiana subsp. woodiana]
          Length = 128

 Score =  102 bits (253), Expect = 7e-20
 Identities = 50/54 (92%), Positives = 52/54 (96%)
 Frame = +3

Query: 450 LFVSSFRGAHSRLTRTITQQKIRALVSAHRDRDKQKRNFRCLWITRLNAVIRER 611
           LF SSFRGAHSRLTRTITQQKIRALVSAHRDRDKQKRNFR LWITR+NAVIRE+
Sbjct: 19  LFASSFRGAHSRLTRTITQQKIRALVSAHRDRDKQKRNFRRLWITRINAVIREK 72


>gb|ADD30310.1| ribosomal protein L20 [Gunnera manicata]
          Length = 119

 Score =  101 bits (252), Expect = 9e-20
 Identities = 50/53 (94%), Positives = 52/53 (98%)
 Frame = +3

Query: 450 LFVSSFRGAHSRLTRTITQQKIRALVSAHRDRDKQKRNFRCLWITRLNAVIRE 608
           LFVSSFRGAHSRLTRTITQQKIRALVSAHRDRDKQKRNFR LWITR+NAVIR+
Sbjct: 19  LFVSSFRGAHSRLTRTITQQKIRALVSAHRDRDKQKRNFRRLWITRINAVIRD 71


>ref|YP_007317271.1| ribosomal protein L20 (chloroplast) [Camellia sinensis]
           gi|430728295|gb|AGA55619.1| ribosomal protein L20
           (chloroplast) [Camellia sinensis]
          Length = 117

 Score =  100 bits (250), Expect = 2e-19
 Identities = 49/54 (90%), Positives = 52/54 (96%)
 Frame = +3

Query: 450 LFVSSFRGAHSRLTRTITQQKIRALVSAHRDRDKQKRNFRCLWITRLNAVIRER 611
           LF SSFRGAHSRLTRTITQQKIRALVSAHRDRD+QKRNFR LWITR+NAVIRE+
Sbjct: 19  LFASSFRGAHSRLTRTITQQKIRALVSAHRDRDRQKRNFRRLWITRINAVIREK 72


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