BLASTX nr result

ID: Scutellaria24_contig00029069 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00029069
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530343.1| PREDICTED: ATP-dependent DNA helicase recG-l...    58   7e-07
emb|CBI26906.3| unnamed protein product [Vitis vinifera]               55   6e-06

>ref|XP_003530343.1| PREDICTED: ATP-dependent DNA helicase recG-like [Glycine max]
          Length = 1178

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 43/135 (31%), Positives = 60/135 (44%), Gaps = 19/135 (14%)
 Frame = +3

Query: 3   PTVELYDGPAFFSQTTESLGPQILEGCIPSRIDANWVDYIL-EEKPV-----KSTIYSQL 164
           P V+LYDG    S+T  SL  +  E      ++A+WV   L EE+P       S   S L
Sbjct: 316 PRVDLYDGTRSCSETMNSLATENFENSFSDSLEASWVQSTLSEERPSLYASHSSLTSSTL 375

Query: 165 PEWNAEP-------------RNATQLTADIPCSNAGSETQLTAASVAEILDKSINCIPGL 305
            E ++ P                 Q+T +        E+Q  +      LDKS++CIPGL
Sbjct: 376 GEEDSCPSPLPPDLTPSIYEEKLDQITREDSQMKVRMESQSNSTPSELFLDKSVSCIPGL 435

Query: 306 TKRQLSLLENSGFFT 350
           +KR    L+N GF T
Sbjct: 436 SKRHYQQLDNYGFHT 450


>emb|CBI26906.3| unnamed protein product [Vitis vinifera]
          Length = 988

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 46/123 (37%), Positives = 56/123 (45%), Gaps = 7/123 (5%)
 Frame = +3

Query: 3   PTVELYDGPAFFSQTTESLGPQILEGCIPSRIDANW--VDYILEEKPVKSTIYSQLPEWN 176
           P VELYD     S     L  QI E  + S     W   D   E  P   ++   LP  N
Sbjct: 138 PPVELYDENKCHSDVRSLLAAQICEEFLSSSGAEKWDGPDRFSETWP---SLCPTLPNIN 194

Query: 177 A-----EPRNATQLTADIPCSNAGSETQLTAASVAEILDKSINCIPGLTKRQLSLLENSG 341
           A     E ++   +T + P +N   E+Q  A  V  ILDKSI+ IPGL KR    LEN G
Sbjct: 195 ASLLRKEKKSDVLVTVEGPPANMVLESQNNAEPVELILDKSISFIPGLQKRHCRQLENCG 254

Query: 342 FFT 350
           F T
Sbjct: 255 FHT 257


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