BLASTX nr result

ID: Scutellaria24_contig00029055 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00029055
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315707.1| AP2/ERF domain-containing transcription fact...    69   3e-10
ref|XP_002531539.1| Ethylene-responsive transcription factor 1B,...    69   4e-10
gb|ADE41122.1| AP2 domain class transcription factor [Malus x do...    64   1e-08
ref|XP_002281052.2| PREDICTED: LOW QUALITY PROTEIN: ethylene-res...    64   1e-08
gb|ADJ67439.1| ethylene response factor 10 [Actinidia deliciosa]       63   2e-08

>ref|XP_002315707.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222864747|gb|EEF01878.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 221

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 39/73 (53%), Positives = 43/73 (58%), Gaps = 14/73 (19%)
 Frame = -3

Query: 178 SWDSQPLVTNSLPFNENDSQEMLLFHLLSEAPPETSSNDVVVG--------------PEK 41
           S+ SQ    +SLPFNENDS EMLLF L+SEA  ETS      G              P+K
Sbjct: 24  SFYSQSFNQSSLPFNENDSDEMLLFELISEATQETSRTTFCNGIVKEEEVSSVAKRTPDK 83

Query: 40  EKPYRGVRRRPWG 2
           EK YRGVRRRPWG
Sbjct: 84  EKSYRGVRRRPWG 96


>ref|XP_002531539.1| Ethylene-responsive transcription factor 1B, putative [Ricinus
           communis] gi|223528856|gb|EEF30858.1|
           Ethylene-responsive transcription factor 1B, putative
           [Ricinus communis]
          Length = 224

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/64 (57%), Positives = 41/64 (64%), Gaps = 14/64 (21%)
 Frame = -3

Query: 151 NSLPFNENDSQEMLLFHLLSEAPPETSSND--------------VVVGPEKEKPYRGVRR 14
           NSLPFNENDS+EMLL+ L+SEA  ETS  D              V   P+KEK YRGVRR
Sbjct: 31  NSLPFNENDSEEMLLYGLISEATQETSKIDYSNRNLKEEEVSSIVKESPKKEKSYRGVRR 90

Query: 13  RPWG 2
           RPWG
Sbjct: 91  RPWG 94


>gb|ADE41122.1| AP2 domain class transcription factor [Malus x domestica]
          Length = 229

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 37/76 (48%), Positives = 43/76 (56%), Gaps = 17/76 (22%)
 Frame = -3

Query: 178 SWDSQ-PLVTNSLPFNENDSQEMLLFHLLSEAPPETSSNDVVV----------------G 50
           SWD       NSLPFNENDS+EMLL+ L+SE   E +S+  V                  
Sbjct: 24  SWDDGLKFGNNSLPFNENDSEEMLLYGLISEGTQEITSSVSVFANPIKEEEVSSASEEEN 83

Query: 49  PEKEKPYRGVRRRPWG 2
           P+KEK YRGVRRRPWG
Sbjct: 84  PKKEKSYRGVRRRPWG 99


>ref|XP_002281052.2| PREDICTED: LOW QUALITY PROTEIN: ethylene-responsive transcription
           factor 1B [Vitis vinifera]
          Length = 267

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/61 (55%), Positives = 38/61 (62%), Gaps = 11/61 (18%)
 Frame = -3

Query: 151 NSLPFNENDSQEMLLFHLLSEAPPETSSNDVV-----------VGPEKEKPYRGVRRRPW 5
           NSLPFNENDSQEMLL  +L+ +  ETS    +             PEKEK YRGVRRRPW
Sbjct: 27  NSLPFNENDSQEMLLLGMLASSTQETSETVSLNRVKEEEVTSQENPEKEKSYRGVRRRPW 86

Query: 4   G 2
           G
Sbjct: 87  G 87


>gb|ADJ67439.1| ethylene response factor 10 [Actinidia deliciosa]
          Length = 216

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/74 (47%), Positives = 40/74 (54%), Gaps = 15/74 (20%)
 Frame = -3

Query: 178 SWDSQPLVTNSLPFNENDSQEMLLFHLLSEAPPETSSNDVVVG---------------PE 44
           SWD      NSLPFN NDS+EMLL  +L+E   + SS  +  G               P 
Sbjct: 26  SWDDLLFYHNSLPFNVNDSEEMLLLGVLAEGASKESSETISSGGIKEEEVTSVAKDQKPI 85

Query: 43  KEKPYRGVRRRPWG 2
           KEK YRGVRRRPWG
Sbjct: 86  KEKSYRGVRRRPWG 99


Top