BLASTX nr result

ID: Scutellaria24_contig00029029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00029029
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532367.1| ring finger protein, putative [Ricinus commu...   104   9e-21
ref|XP_002263905.1| PREDICTED: RING-H2 finger protein ATL1-like ...   102   4e-20
ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like...    99   5e-19
emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera]    99   5e-19
ref|XP_004160270.1| PREDICTED: RING-H2 finger protein ATL16-like...    97   1e-18

>ref|XP_002532367.1| ring finger protein, putative [Ricinus communis]
           gi|223527923|gb|EEF30010.1| ring finger protein,
           putative [Ricinus communis]
          Length = 345

 Score =  104 bits (259), Expect = 9e-21
 Identities = 69/164 (42%), Positives = 80/164 (48%), Gaps = 30/164 (18%)
 Frame = -2

Query: 403 RYHLDTIVAPNSSPQDLHP------------------------------QEIAVSREDVI 314
           RY +D I+AP+SSPQ   P                              QE   SRE  +
Sbjct: 178 RYPIDQIIAPSSSPQGSQPYTDSLMGGDEDFVVIELGGEEEGILLPHRQQERDASRETQM 237

Query: 313 EQGDSSRFKFELKIGKNKARKCHHVSIMGDEGIHVREKDDQFSIQPIRRSFSMDSAGDRC 134
           +    S  K E K GK K RK HH+SIMGDE I VREKDDQFSIQPIRRSFS+DSA DR 
Sbjct: 238 QLRSQSPAKMEQKPGKLKPRKRHHLSIMGDECIDVREKDDQFSIQPIRRSFSLDSAVDRQ 297

Query: 133 VYLSVQEILRQXXXXXXXXXXXXXXXXXXXXXXSFGYGRASRNA 2
           +YLSVQ I++Q                       FG+   SR A
Sbjct: 298 LYLSVQNIIQQNTHQRGIYTSEESSNRVQTSFFHFGHSVGSRKA 341


>ref|XP_002263905.1| PREDICTED: RING-H2 finger protein ATL1-like [Vitis vinifera]
          Length = 351

 Score =  102 bits (253), Expect = 4e-20
 Identities = 69/166 (41%), Positives = 84/166 (50%), Gaps = 32/166 (19%)
 Frame = -2

Query: 403 RYHLDTIVAPNSSPQDLHP-------------------------------QEIAVSREDV 317
           RY  D I+AP+SSPQD  P                               QE A SRE +
Sbjct: 178 RYRNDPIIAPSSSPQDPRPFSEALMGGDDDFVVIELGGGDDRGVILPPRQQERADSRELL 237

Query: 316 IEQGDSSRFKFELKIGKNKARKCHHVSIMGDEGIHVREKDDQFSIQPIRRSFSMDSAGDR 137
           ++    S  K + K+   K+RK H+VS MGDE I VREKDDQF IQPIRRSFSMDSA D 
Sbjct: 238 VQSRGPSPTKLQQKLENKKSRKFHYVSSMGDECIDVREKDDQFLIQPIRRSFSMDSAADP 297

Query: 136 CVYLSVQEILR-QXXXXXXXXXXXXXXXXXXXXXXSFGYGRASRNA 2
            +Y++VQEI+R +                      SFG+GR SRNA
Sbjct: 298 QLYMTVQEIIRNKNRPLSEVSTSQECDSRVRRSFFSFGHGRGSRNA 343


>ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like [Vitis vinifera]
          Length = 359

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 67/164 (40%), Positives = 80/164 (48%), Gaps = 30/164 (18%)
 Frame = -2

Query: 403 RYHLDTIVAPNSSPQD------------------------------LHPQEIAVSREDVI 314
           R+ +  I+AP+SSPQD                              L P E   SRE   
Sbjct: 188 RFPVHQIIAPSSSPQDPSPYANNYIGGDEDFVVIELGNDSSADSSLLRPPERLNSRELSA 247

Query: 313 EQGDSSRFKFELKIGKNKARKCHHVSIMGDEGIHVREKDDQFSIQPIRRSFSMDSAGDRC 134
                S  K E +I   KARK HHV+ MGDE I  R KDDQFSIQPIRRSFSMDS+ DR 
Sbjct: 248 PSISPSPRKLEQRIVPKKARKFHHVASMGDECIDTRGKDDQFSIQPIRRSFSMDSSNDRQ 307

Query: 133 VYLSVQEILRQXXXXXXXXXXXXXXXXXXXXXXSFGYGRASRNA 2
           +YL++QEIL+Q                      SFG+GR SR+A
Sbjct: 308 LYLAIQEILQQNRPVSDFSPSEGCSSRFRRSFFSFGHGRGSRSA 351


>emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera]
          Length = 419

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 67/164 (40%), Positives = 80/164 (48%), Gaps = 30/164 (18%)
 Frame = -2

Query: 403 RYHLDTIVAPNSSPQD------------------------------LHPQEIAVSREDVI 314
           R+ +  I+AP+SSPQD                              L P E   SRE   
Sbjct: 248 RFPVHQIIAPSSSPQDPSPYANNYIGGDEDFVVIELGNDSSADSSLLRPPERLNSRELSA 307

Query: 313 EQGDSSRFKFELKIGKNKARKCHHVSIMGDEGIHVREKDDQFSIQPIRRSFSMDSAGDRC 134
                S  K E +I   KARK HHV+ MGDE I  R KDDQFSIQPIRRSFSMDS+ DR 
Sbjct: 308 PSISPSPRKLEQRIVPKKARKFHHVASMGDECIDTRGKDDQFSIQPIRRSFSMDSSNDRQ 367

Query: 133 VYLSVQEILRQXXXXXXXXXXXXXXXXXXXXXXSFGYGRASRNA 2
           +YL++QEIL+Q                      SFG+GR SR+A
Sbjct: 368 LYLAIQEILQQNRPVSDFSPSEGCSSRFRRSFFSFGHGRGSRSA 411


>ref|XP_004160270.1| PREDICTED: RING-H2 finger protein ATL16-like [Cucumis sativus]
          Length = 351

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 61/124 (49%), Positives = 75/124 (60%), Gaps = 26/124 (20%)
 Frame = -2

Query: 394 LDTIVAPNSSPQD--LHPQEIAVSREDVI----------------EQGDSSR-------- 293
           +D  VAP+SSPQ+  L    +  S ED +                ++G++SR        
Sbjct: 184 IDQTVAPSSSPQNSQLLSNGLMGSDEDFVVIELGSEDEVVFSEGQQEGNASREVLVQQTS 243

Query: 292 FKFELKIGKNKARKCHHVSIMGDEGIHVREKDDQFSIQPIRRSFSMDSAGDRCVYLSVQE 113
            K E KI K K RKCHHVSIMGDEGI VREKDDQF  QPIRRSFSMDSA D+ +YL+V+ 
Sbjct: 244 KKTENKIRKPKTRKCHHVSIMGDEGIDVREKDDQFFTQPIRRSFSMDSAADQQLYLTVEM 303

Query: 112 ILRQ 101
           I+ Q
Sbjct: 304 IIHQ 307


Top