BLASTX nr result
ID: Scutellaria24_contig00028971
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria24_contig00028971
(307 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABB51614.1| LIM-domain protein [Brassica napus] gi|79013988|g... 152 3e-35
gb|AAD32870.1|AC005489_8 F14N23.8 [Arabidopsis thaliana] 152 3e-35
dbj|BAJ34608.1| unnamed protein product [Thellungiella halophila] 152 3e-35
ref|XP_002892554.1| hypothetical protein ARALYDRAFT_471134 [Arab... 152 3e-35
ref|NP_172491.1| transcription factor lim1 [Arabidopsis thaliana... 152 3e-35
>gb|ABB51614.1| LIM-domain protein [Brassica napus] gi|79013988|gb|ABB51648.1| LIM
domain protein [Brassica napus]
Length = 189
Score = 152 bits (384), Expect = 3e-35
Identities = 67/79 (84%), Positives = 73/79 (92%)
Frame = -1
Query: 238 SKVSGMFGGTREKCVGCSKTVYPIDKVSVNGAAYHKSCFRCSYGGCTISPSNYIAHEGVL 59
+KVS MFGGTREKCVGC KTVYPI+KVSVNG YHKSCF+C++GGCTISPSNYIAHEG L
Sbjct: 97 TKVSNMFGGTREKCVGCDKTVYPIEKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKL 156
Query: 58 YCKHHHMQLIKTKGNLSQL 2
YCKHHH+QLIK KGNLSQL
Sbjct: 157 YCKHHHIQLIKEKGNLSQL 175
Score = 77.4 bits (189), Expect = 1e-12
Identities = 33/72 (45%), Positives = 46/72 (63%)
Frame = -1
Query: 220 FGGTREKCVGCSKTVYPIDKVSVNGAAYHKSCFRCSYGGCTISPSNYIAHEGVLYCKHHH 41
F GT +KC+ C KTVY +DK++ + YHK+CFRC + T+ SNY + EG LYC+ H
Sbjct: 3 FAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGALYCRPHF 62
Query: 40 MQLIKTKGNLSQ 5
Q K G+L +
Sbjct: 63 DQNFKRTGSLEK 74
>gb|AAD32870.1|AC005489_8 F14N23.8 [Arabidopsis thaliana]
Length = 223
Score = 152 bits (384), Expect = 3e-35
Identities = 67/79 (84%), Positives = 73/79 (92%)
Frame = -1
Query: 238 SKVSGMFGGTREKCVGCSKTVYPIDKVSVNGAAYHKSCFRCSYGGCTISPSNYIAHEGVL 59
+KVS MFGGTREKCVGC KTVYPI+KVSVNG YHKSCF+C++GGCTISPSNYIAHEG L
Sbjct: 130 TKVSNMFGGTREKCVGCDKTVYPIEKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKL 189
Query: 58 YCKHHHMQLIKTKGNLSQL 2
YCKHHH+QLIK KGNLSQL
Sbjct: 190 YCKHHHIQLIKEKGNLSQL 208
Score = 79.0 bits (193), Expect = 4e-13
Identities = 34/72 (47%), Positives = 47/72 (65%)
Frame = -1
Query: 220 FGGTREKCVGCSKTVYPIDKVSVNGAAYHKSCFRCSYGGCTISPSNYIAHEGVLYCKHHH 41
F GT +KC+ C KTVY +DK++ + YHK+CFRC + T+ SNY + EGVLYC+ H
Sbjct: 3 FAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRPHF 62
Query: 40 MQLIKTKGNLSQ 5
Q K G+L +
Sbjct: 63 DQNFKRTGSLEK 74
>dbj|BAJ34608.1| unnamed protein product [Thellungiella halophila]
Length = 189
Score = 152 bits (384), Expect = 3e-35
Identities = 67/79 (84%), Positives = 73/79 (92%)
Frame = -1
Query: 238 SKVSGMFGGTREKCVGCSKTVYPIDKVSVNGAAYHKSCFRCSYGGCTISPSNYIAHEGVL 59
+KVS MFGGTREKCVGC KTVYPI+KVSVNG YHKSCF+C++GGCTISPSNYIAHEG L
Sbjct: 97 TKVSNMFGGTREKCVGCDKTVYPIEKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKL 156
Query: 58 YCKHHHMQLIKTKGNLSQL 2
YCKHHH+QLIK KGNLSQL
Sbjct: 157 YCKHHHIQLIKEKGNLSQL 175
Score = 79.0 bits (193), Expect = 4e-13
Identities = 34/72 (47%), Positives = 47/72 (65%)
Frame = -1
Query: 220 FGGTREKCVGCSKTVYPIDKVSVNGAAYHKSCFRCSYGGCTISPSNYIAHEGVLYCKHHH 41
F GT +KC+ C KTVY +DK++ + YHK+CFRC + T+ SNY + EGVLYC+ H
Sbjct: 3 FAGTTQKCMACEKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRPHF 62
Query: 40 MQLIKTKGNLSQ 5
Q K G+L +
Sbjct: 63 DQNFKRTGSLEK 74
>ref|XP_002892554.1| hypothetical protein ARALYDRAFT_471134 [Arabidopsis lyrata subsp.
lyrata] gi|297338396|gb|EFH68813.1| hypothetical protein
ARALYDRAFT_471134 [Arabidopsis lyrata subsp. lyrata]
Length = 190
Score = 152 bits (384), Expect = 3e-35
Identities = 67/79 (84%), Positives = 73/79 (92%)
Frame = -1
Query: 238 SKVSGMFGGTREKCVGCSKTVYPIDKVSVNGAAYHKSCFRCSYGGCTISPSNYIAHEGVL 59
+KVS MFGGTREKCVGC KTVYPI+KVSVNG YHKSCF+C++GGCTISPSNYIAHEG L
Sbjct: 97 TKVSNMFGGTREKCVGCDKTVYPIEKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKL 156
Query: 58 YCKHHHMQLIKTKGNLSQL 2
YCKHHH+QLIK KGNLSQL
Sbjct: 157 YCKHHHIQLIKEKGNLSQL 175
Score = 77.8 bits (190), Expect = 8e-13
Identities = 34/72 (47%), Positives = 47/72 (65%)
Frame = -1
Query: 220 FGGTREKCVGCSKTVYPIDKVSVNGAAYHKSCFRCSYGGCTISPSNYIAHEGVLYCKHHH 41
F GT +KC+ C KTVY +DK++ + YHK+CFRC + T+ SNY + EGVLYC+ H
Sbjct: 3 FVGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRPHF 62
Query: 40 MQLIKTKGNLSQ 5
Q K G+L +
Sbjct: 63 DQNFKRTGSLEK 74
>ref|NP_172491.1| transcription factor lim1 [Arabidopsis thaliana]
gi|13926190|gb|AAK49575.1|AF370569_1 similar to
transcription factor SF3 (pir|IS37656) [Arabidopsis
thaliana] gi|21553513|gb|AAM62606.1| putative
transcription factor [Arabidopsis thaliana]
gi|332190431|gb|AEE28552.1| transcription factor lim1
[Arabidopsis thaliana]
Length = 190
Score = 152 bits (384), Expect = 3e-35
Identities = 67/79 (84%), Positives = 73/79 (92%)
Frame = -1
Query: 238 SKVSGMFGGTREKCVGCSKTVYPIDKVSVNGAAYHKSCFRCSYGGCTISPSNYIAHEGVL 59
+KVS MFGGTREKCVGC KTVYPI+KVSVNG YHKSCF+C++GGCTISPSNYIAHEG L
Sbjct: 97 TKVSNMFGGTREKCVGCDKTVYPIEKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKL 156
Query: 58 YCKHHHMQLIKTKGNLSQL 2
YCKHHH+QLIK KGNLSQL
Sbjct: 157 YCKHHHIQLIKEKGNLSQL 175
Score = 79.0 bits (193), Expect = 4e-13
Identities = 34/72 (47%), Positives = 47/72 (65%)
Frame = -1
Query: 220 FGGTREKCVGCSKTVYPIDKVSVNGAAYHKSCFRCSYGGCTISPSNYIAHEGVLYCKHHH 41
F GT +KC+ C KTVY +DK++ + YHK+CFRC + T+ SNY + EGVLYC+ H
Sbjct: 3 FAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRPHF 62
Query: 40 MQLIKTKGNLSQ 5
Q K G+L +
Sbjct: 63 DQNFKRTGSLEK 74