BLASTX nr result

ID: Scutellaria24_contig00028930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00028930
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumi...   120   1e-25
ref|XP_004140043.1| PREDICTED: F-box protein SKIP23-like [Cucumi...   120   1e-25
ref|XP_002305539.1| f-box family protein [Populus trichocarpa] g...   112   3e-23
ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protei...   108   4e-22
emb|CBI37824.3| unnamed protein product [Vitis vinifera]              104   6e-21

>ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
          Length = 458

 Score =  120 bits (301), Expect = 1e-25
 Identities = 56/114 (49%), Positives = 77/114 (67%), Gaps = 2/114 (1%)
 Frame = +2

Query: 56  MADWTTLPSELLHLISQHLPTSIDVLRFRSVCATWRTAVPPPY--VPTRFPILPNSGISD 229
           MA+W+ LP +LL+LISQ L    D +RFRSVC++WR+ V P    +P RFP LPN GISD
Sbjct: 1   MAEWSHLPKDLLYLISQRLQNPFDTMRFRSVCSSWRSVVSPKRHTLPVRFPFLPNHGISD 60

Query: 230 TTWGFYLSKRTVYSLQSSPTRHSSWIIKLERDNPTRMHLLNPLARSRFKPLPNS 391
            TWGF L+KR+++ + S       W+IK+E D    + + NPL++S FKPLP +
Sbjct: 61  PTWGFNLTKRSIFRVGSPMDHSDGWLIKVEEDACGMIKISNPLSKSYFKPLPKN 114


>ref|XP_004140043.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
          Length = 404

 Score =  120 bits (301), Expect = 1e-25
 Identities = 56/114 (49%), Positives = 77/114 (67%), Gaps = 2/114 (1%)
 Frame = +2

Query: 56  MADWTTLPSELLHLISQHLPTSIDVLRFRSVCATWRTAVPPPY--VPTRFPILPNSGISD 229
           MA+W+ LP +LL+LISQ L    D +RFRSVC++WR+ V P    +P RFP LPN GISD
Sbjct: 1   MAEWSHLPKDLLYLISQRLQNPFDTMRFRSVCSSWRSVVSPKRHTLPVRFPFLPNHGISD 60

Query: 230 TTWGFYLSKRTVYSLQSSPTRHSSWIIKLERDNPTRMHLLNPLARSRFKPLPNS 391
            TWGF L+KR+++ + S       W+IK+E D    + + NPL++S FKPLP +
Sbjct: 61  PTWGFNLTKRSIFRVGSPMDHSDGWLIKVEEDACGMIKISNPLSKSYFKPLPKN 114


>ref|XP_002305539.1| f-box family protein [Populus trichocarpa]
           gi|222848503|gb|EEE86050.1| f-box family protein
           [Populus trichocarpa]
          Length = 469

 Score =  112 bits (280), Expect = 3e-23
 Identities = 60/120 (50%), Positives = 81/120 (67%), Gaps = 8/120 (6%)
 Frame = +2

Query: 56  MADWTTLPSELLHLISQHLPTSIDVLRFRSVCATWRTAVP--PPYVPTR-FPILPNSGIS 226
           MA+WT LP +L+ LIS+ L TS D+LRFRSVC +WR+++P  PP + +  F ILPN GIS
Sbjct: 1   MAEWTHLPKDLMELISKRLDTSTDLLRFRSVCNSWRSSIPPEPPCLSSNTFKILPNDGIS 60

Query: 227 DTTWGFYLSKRTVYSLQSSPTRHS-----SWIIKLERDNPTRMHLLNPLARSRFKPLPNS 391
            T++GF L KRTV+ L   P  H+      W+IK+E D P + HL +PL+R R   LPN+
Sbjct: 61  HTSFGFSLFKRTVF-LVGLPNSHNQTDTQGWLIKIEEDVPGKKHLFDPLSRCRSTSLPNN 119


>ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP23-like [Vitis
           vinifera]
          Length = 387

 Score =  108 bits (270), Expect = 4e-22
 Identities = 52/116 (44%), Positives = 76/116 (65%), Gaps = 6/116 (5%)
 Frame = +2

Query: 56  MADWTTLPSELLHLISQHLPTSIDVLRFRSVCATWRTAVP--PPYVPTRFPILPNSGISD 229
           MA+W  LP +LLHLI++ L +  D+LRFRSVC++WR++ P  P  + +  PILP +G S+
Sbjct: 1   MAEWANLPRDLLHLIAKRLDSHFDLLRFRSVCSSWRSSTPSKPRSIFSHLPILPTTGFSE 60

Query: 230 TTWGFYLSKRTVYSL----QSSPTRHSSWIIKLERDNPTRMHLLNPLARSRFKPLP 385
            TW FYLSKR++  L      + T  +SW+IK+E D    + L+NPL   +F+ LP
Sbjct: 61  ITWAFYLSKRSILQLGLPDSRAQTTPNSWLIKIEEDPSGVIRLINPLTTFKFRHLP 116


>emb|CBI37824.3| unnamed protein product [Vitis vinifera]
          Length = 226

 Score =  104 bits (260), Expect = 6e-21
 Identities = 57/117 (48%), Positives = 74/117 (63%), Gaps = 7/117 (5%)
 Frame = +2

Query: 56  MADWTTLPSELLHLISQHLPTSIDVLRFRSVCATWRTAVP--PPYVPTRFPILPNSGISD 229
           MA W+ LP +LL LI+Q L T  D+L  RSVC++W   VP  P  +P+RFPILP +G   
Sbjct: 1   MARWSQLPKDLLLLIAQRLNTHFDLLCLRSVCSSWHACVPSRPHPLPSRFPILPTNG--- 57

Query: 230 TTWGFYLSKRTVYSLQSSPTRH-----SSWIIKLERDNPTRMHLLNPLARSRFKPLP 385
           T+WG YLS+RT+  L   P  H      SW+IK+E D P   HL+NPL+  +FK LP
Sbjct: 58  TSWGLYLSRRTILCL-GLPESHCQPTIGSWLIKVEEDVPDMAHLVNPLSTFQFKHLP 113


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