BLASTX nr result

ID: Scutellaria24_contig00028906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00028906
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ...   101   9e-23
emb|CBI40707.3| unnamed protein product [Vitis vinifera]              104   9e-21
ref|XP_003588310.1| hypothetical protein MTR_1g005810 [Medicago ...    64   2e-19
emb|CBI31112.3| unnamed protein product [Vitis vinifera]               80   2e-13
emb|CAN65166.1| hypothetical protein VITISV_029400 [Vitis vinifera]    65   2e-12

>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
            gi|355477385|gb|AES58588.1| Ribosomal protein S10
            [Medicago truncatula]
          Length = 1152

 Score =  101 bits (251), Expect(2) = 9e-23
 Identities = 48/51 (94%), Positives = 49/51 (96%), Gaps = 1/51 (1%)
 Frame = -3

Query: 262  PFRFTECDLGHDGSLRASVGKRSPEYSTRSP-FLAAMGSTCEQGKPNGNQK 113
            PFRFTECDLGHDG LRASVGKRSPEYSTRSP FLAAMGSTC+QGKPNGNQK
Sbjct: 958  PFRFTECDLGHDGGLRASVGKRSPEYSTRSPFFLAAMGSTCKQGKPNGNQK 1008



 Score = 30.4 bits (67), Expect(2) = 9e-23
 Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 2/24 (8%)
 Frame = -2

Query: 116  KNGGTAL--GRRRSKKRRLTQLKV 51
            K  GT L  GRRRSKKRRLT LK+
Sbjct: 1008 KREGTTLTLGRRRSKKRRLTLLKL 1031


>emb|CBI40707.3| unnamed protein product [Vitis vinifera]
          Length = 574

 Score =  104 bits (259), Expect = 9e-21
 Identities = 49/54 (90%), Positives = 49/54 (90%)
 Frame = -3

Query: 259 FRFTECDLGHDGSLRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGNQKTGVPH 98
           FRF ECDLGHDGSLRASVGKRS EYSTRSPFLA MGSTCEQGKPNGNQKTG  H
Sbjct: 519 FRFIECDLGHDGSLRASVGKRSSEYSTRSPFLATMGSTCEQGKPNGNQKTGGYH 572


>ref|XP_003588310.1| hypothetical protein MTR_1g005810 [Medicago truncatula]
           gi|355477358|gb|AES58561.1| hypothetical protein
           MTR_1g005810 [Medicago truncatula]
          Length = 146

 Score = 64.3 bits (155), Expect(3) = 2e-19
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = +3

Query: 165 RKGDLVLYSGDLFPTEARKLPSCPRSHSVNRKGR 266
           +KGDLVLYSG  FPTEARK PSCPRSHSVNRKG+
Sbjct: 89  KKGDLVLYSGIFFPTEARKPPSCPRSHSVNRKGK 122



 Score = 53.1 bits (126), Expect(3) = 2e-19
 Identities = 24/25 (96%), Positives = 24/25 (96%)
 Frame = +2

Query: 266 KPTHLSAPLVDRCGFTKRLSTVHSR 340
           KPTH SAPLVDRCGFTKRLSTVHSR
Sbjct: 122 KPTHPSAPLVDRCGFTKRLSTVHSR 146



 Score = 22.7 bits (47), Expect(3) = 2e-19
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +1

Query: 148 STPWQQEK 171
           STPWQQEK
Sbjct: 82  STPWQQEK 89


>emb|CBI31112.3| unnamed protein product [Vitis vinifera]
          Length = 2099

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 47/73 (64%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
 Frame = -3

Query: 220  LRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGNQKTGVPHWAEDD-PKSEGSPS*R*RK 44
            LRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGNQK G     +    K++  P+     
Sbjct: 1775 LRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGNQKMGGYRIGQKTIQKAKAHPAEGRSF 1834

Query: 43   ELWKLTLFLKGER 5
            +L  L LF KGER
Sbjct: 1835 DLTPLLLF-KGER 1846


>emb|CAN65166.1| hypothetical protein VITISV_029400 [Vitis vinifera]
          Length = 267

 Score = 64.7 bits (156), Expect(2) = 2e-12
 Identities = 35/61 (57%), Positives = 39/61 (63%), Gaps = 11/61 (18%)
 Frame = +3

Query: 120 FPLGLPCSQ-----------VDPMAARKGDLVLYSGDLFPTEARKLPSCPRSHSVNRKGR 266
           +P+GL  S            VDPMAARKGDLVLYSGDLFPTEARKLPSC +      KG 
Sbjct: 94  YPIGLEASYLSPISRPFNFLVDPMAARKGDLVLYSGDLFPTEARKLPSCTQITFRESKGE 153

Query: 267 S 269
           +
Sbjct: 154 A 154



 Score = 32.3 bits (72), Expect(2) = 2e-12
 Identities = 16/30 (53%), Positives = 17/30 (56%)
 Frame = +1

Query: 259 RGEAYXXXXXXXXXXXLYEASKHSSLTLIN 348
           +GEAY            YEASKHSSL LIN
Sbjct: 151 KGEAYSSISSSRRSVRFYEASKHSSLALIN 180


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