BLASTX nr result

ID: Scutellaria24_contig00028742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00028742
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167072.1| PREDICTED: pentatricopeptide repeat-containi...   141   5e-32
ref|XP_004147297.1| PREDICTED: pentatricopeptide repeat-containi...   140   1e-31
ref|XP_002879134.1| hypothetical protein ARALYDRAFT_481728 [Arab...   137   7e-31
ref|XP_002324476.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30
ref|XP_002282154.2| PREDICTED: pentatricopeptide repeat-containi...   135   5e-30

>ref|XP_004167072.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
           mitochondrial-like [Cucumis sativus]
          Length = 428

 Score =  141 bits (356), Expect = 5e-32
 Identities = 60/78 (76%), Positives = 72/78 (92%)
 Frame = -2

Query: 235 EDGVEPDVFCLNCMIKGYVLSLHINDALRVFHQMGVVYNCQPNSFSYDYLIHGLCAQGRT 56
           +DG+EPD+F LNCMIKGYVLSLH+NDALR+FHQMGVVY+C PNS+SYDYLIHGLCAQ RT
Sbjct: 263 DDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSYDYLIHGLCAQART 322

Query: 55  RNAREICDRMKKDGFLPS 2
            NA+E+C+ MK+ GF+PS
Sbjct: 323 DNAKELCNEMKEKGFVPS 340


>ref|XP_004147297.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
           mitochondrial-like [Cucumis sativus]
          Length = 428

 Score =  140 bits (352), Expect = 1e-31
 Identities = 59/78 (75%), Positives = 72/78 (92%)
 Frame = -2

Query: 235 EDGVEPDVFCLNCMIKGYVLSLHINDALRVFHQMGVVYNCQPNSFSYDYLIHGLCAQGRT 56
           +DG+EPD+F LNCMIKGYVLSLH+NDALR+FHQMGVVY+C PNS+S+DYLIHGLCAQ RT
Sbjct: 263 DDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGLCAQART 322

Query: 55  RNAREICDRMKKDGFLPS 2
            NA+E+C+ MK+ GF+PS
Sbjct: 323 DNAKELCNEMKEKGFVPS 340


>ref|XP_002879134.1| hypothetical protein ARALYDRAFT_481728 [Arabidopsis lyrata subsp.
           lyrata] gi|297324973|gb|EFH55393.1| hypothetical protein
           ARALYDRAFT_481728 [Arabidopsis lyrata subsp. lyrata]
          Length = 436

 Score =  137 bits (346), Expect = 7e-31
 Identities = 59/78 (75%), Positives = 70/78 (89%)
 Frame = -2

Query: 235 EDGVEPDVFCLNCMIKGYVLSLHINDALRVFHQMGVVYNCQPNSFSYDYLIHGLCAQGRT 56
           + G+EPDVF LNC++KGYVLSLH+NDALR+FHQM VVYNCQPNSF+YDYLIHGLCAQGRT
Sbjct: 275 DSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYNCQPNSFTYDYLIHGLCAQGRT 334

Query: 55  RNAREICDRMKKDGFLPS 2
            NARE+ + MK  GF+P+
Sbjct: 335 INARELLNEMKGKGFVPN 352


>ref|XP_002324476.1| predicted protein [Populus trichocarpa] gi|222865910|gb|EEF03041.1|
           predicted protein [Populus trichocarpa]
          Length = 440

 Score =  135 bits (340), Expect = 3e-30
 Identities = 61/78 (78%), Positives = 68/78 (87%)
 Frame = -2

Query: 235 EDGVEPDVFCLNCMIKGYVLSLHINDALRVFHQMGVVYNCQPNSFSYDYLIHGLCAQGRT 56
           +DGVEPD+F LN MIKGY LSLH+NDALRVFHQMGVVY C PNSFSYDYL+HGLCAQGRT
Sbjct: 268 DDGVEPDIFSLNSMIKGYALSLHVNDALRVFHQMGVVYKCLPNSFSYDYLVHGLCAQGRT 327

Query: 55  RNAREICDRMKKDGFLPS 2
            NARE+ D MK+ GF+ S
Sbjct: 328 NNARELFDEMKEKGFVLS 345


>ref|XP_002282154.2| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
           mitochondrial-like [Vitis vinifera]
          Length = 356

 Score =  135 bits (339), Expect = 5e-30
 Identities = 60/77 (77%), Positives = 68/77 (88%)
 Frame = -2

Query: 232 DGVEPDVFCLNCMIKGYVLSLHINDALRVFHQMGVVYNCQPNSFSYDYLIHGLCAQGRTR 53
           DG+EPDVF LN MI+GYVLSLH+NDALR+FHQMGVVYNC PNS SYDYLIHGLCAQ RT 
Sbjct: 185 DGIEPDVFSLNSMIEGYVLSLHVNDALRIFHQMGVVYNCLPNSHSYDYLIHGLCAQDRTN 244

Query: 52  NAREICDRMKKDGFLPS 2
           NAR++C+ MK  GF+PS
Sbjct: 245 NARKLCNEMKGKGFVPS 261


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