BLASTX nr result
ID: Scutellaria24_contig00028705
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria24_contig00028705
(344 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera] 47 2e-15
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group] 53 1e-13
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p... 53 1e-13
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 57 1e-13
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 52 1e-13
>emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]
Length = 2203
Score = 47.4 bits (111), Expect(3) = 2e-15
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Frame = +2
Query: 194 QIRDKHLHIVEMALALLSRAHIPLNYWCDAFST-VYIINRLPTYTLNNISP 343
++ KH IVE+ L LL+++ +P +W AFST Y++NRLPT L+ +P
Sbjct: 603 KVERKHRSIVEIGLTLLAKSQLPFTFWWHAFSTATYLLNRLPTPVLHCKTP 653
Score = 42.4 bits (98), Expect(3) = 2e-15
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +1
Query: 10 KSEAASIYPTVQAYVERQFATRIKTLQTDWGGEY 111
KS+A SI A V+R+F T++K LQTDWGGE+
Sbjct: 543 KSQATSIVLQFIALVDRKFPTKLKCLQTDWGGEF 576
Score = 36.6 bits (83), Expect(3) = 2e-15
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +3
Query: 123 LVPVLRSLRIRFGHPCPHVHQQNDKSE 203
L +L+ I F HPCPHVHQQN K E
Sbjct: 579 LQSLLQKKGILFRHPCPHVHQQNGKVE 605
>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
Length = 1448
Score = 52.8 bits (125), Expect(3) = 1e-13
Identities = 23/47 (48%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Frame = +2
Query: 206 KHLHIVEMALALLSRAHIPLNYWCDAF-STVYIINRLPTYTLNNISP 343
KH HI+E+ L+LLS A +PL +W +AF + Y+INR+P+ T+ N +P
Sbjct: 622 KHKHIIEVGLSLLSYASMPLKFWDEAFVAATYLINRIPSKTIQNSTP 668
Score = 42.7 bits (99), Expect(3) = 1e-13
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +1
Query: 1 MKVKSEAASIYPTVQAYVERQFATRIKTLQTDWGGEYRR 117
+K KSE + QA VER F +I +QTDWGGEY++
Sbjct: 555 LKYKSEVFEKFKEFQALVERMFDRKIIAMQTDWGGEYQK 593
Score = 25.0 bits (53), Expect(3) = 1e-13
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 168 CPHVHQQNDKSE 203
CPH HQQN +E
Sbjct: 609 CPHTHQQNGSAE 620
>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
sativa Japonica Group]
Length = 1448
Score = 52.8 bits (125), Expect(3) = 1e-13
Identities = 23/47 (48%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Frame = +2
Query: 206 KHLHIVEMALALLSRAHIPLNYWCDAF-STVYIINRLPTYTLNNISP 343
KH HI+E+ L+LLS A +PL +W +AF + Y+INR+P+ T+ N +P
Sbjct: 622 KHKHIIEVGLSLLSYASMPLKFWDEAFVAATYLINRIPSKTIQNSTP 668
Score = 42.7 bits (99), Expect(3) = 1e-13
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +1
Query: 1 MKVKSEAASIYPTVQAYVERQFATRIKTLQTDWGGEYRR 117
+K KSE + QA VER F +I +QTDWGGEY++
Sbjct: 555 LKYKSEVFEKFKEFQALVERMFDRKIIAMQTDWGGEYQK 593
Score = 25.0 bits (53), Expect(3) = 1e-13
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 168 CPHVHQQNDKSE 203
CPH HQQN +E
Sbjct: 609 CPHTHQQNGSAE 620
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 57.0 bits (136), Expect(3) = 1e-13
Identities = 28/47 (59%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Frame = +2
Query: 206 KHLHIVEMALALLSRAHIPLNYWCDAFST-VYIINRLPTYTLNNISP 343
KH HIVE +ALL++A +P YW +AF T VY+INRLPT L N SP
Sbjct: 668 KHRHIVEHGIALLAQASLPFKYWDEAFRTSVYLINRLPTPVLKNKSP 714
Score = 42.7 bits (99), Expect(3) = 1e-13
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +1
Query: 1 MKVKSEAASIYPTVQAYVERQFATRIKTLQTDWGGEYRRSFWYL 132
+K KSEA ++ ++ VE Q +IK +Q+DWGGEYR YL
Sbjct: 601 LKHKSEAFQVFLHFKSQVELQLGHKIKAVQSDWGGEYRSFTQYL 644
Score = 20.8 bits (42), Expect(3) = 1e-13
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +3
Query: 168 CPHVHQQNDKSE 203
CP+ H+QN +E
Sbjct: 655 CPYTHEQNGLAE 666
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 52.4 bits (124), Expect(3) = 1e-13
Identities = 23/47 (48%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Frame = +2
Query: 206 KHLHIVEMALALLSRAHIPLNYWCDAF-STVYIINRLPTYTLNNISP 343
KH HI+E+ L+LLS A +PL +W +AF + Y+INR+P+ T+ N +P
Sbjct: 619 KHRHIIEVGLSLLSYASMPLKFWDEAFVAATYLINRVPSKTIQNSTP 665
Score = 42.7 bits (99), Expect(3) = 1e-13
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +1
Query: 1 MKVKSEAASIYPTVQAYVERQFATRIKTLQTDWGGEYRR 117
+K KSE + QA VER F +I +QTDWGGEY++
Sbjct: 552 LKYKSEVFEKFKEFQALVERMFDRKIIAMQTDWGGEYQK 590
Score = 25.0 bits (53), Expect(3) = 1e-13
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 168 CPHVHQQNDKSE 203
CPH HQQN +E
Sbjct: 606 CPHTHQQNGSAE 617