BLASTX nr result

ID: Scutellaria24_contig00028687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00028687
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310500.1| predicted protein [Populus trichocarpa] gi|2...   153   1e-35
ref|XP_002534099.1| ring finger protein, putative [Ricinus commu...   152   4e-35
ref|XP_002323964.1| predicted protein [Populus trichocarpa] gi|2...   148   4e-34
ref|XP_004155494.1| PREDICTED: RING-H2 finger protein ATL54-like...   146   2e-33
ref|XP_004137067.1| PREDICTED: RING-H2 finger protein ATL54-like...   146   2e-33

>ref|XP_002310500.1| predicted protein [Populus trichocarpa] gi|222853403|gb|EEE90950.1|
           predicted protein [Populus trichocarpa]
          Length = 153

 Score =  153 bits (387), Expect = 1e-35
 Identities = 66/92 (71%), Positives = 77/92 (83%)
 Frame = -1

Query: 295 LDHPIWYIRTVGFPQSLIDSIASFTYKKGDGLIEGNDCSICLSDFQDDEVLRLLPKCSHA 116
           +DHPIWYIRTVG   S+I SI  F YK GDGL+EG +CS+CLS+FQDDE LRLLPKCSHA
Sbjct: 2   VDHPIWYIRTVGLQPSVIGSIRVFKYKSGDGLVEGTECSVCLSEFQDDETLRLLPKCSHA 61

Query: 115 FHVGCIDTWLRSHKNCPVCRAPIVIATTTASN 20
           FH+ CIDTWLRSH NCP+CRAPIV +T  A++
Sbjct: 62  FHIPCIDTWLRSHTNCPLCRAPIVTSTAIATS 93


>ref|XP_002534099.1| ring finger protein, putative [Ricinus communis]
           gi|223525847|gb|EEF28281.1| ring finger protein,
           putative [Ricinus communis]
          Length = 344

 Score =  152 bits (383), Expect = 4e-35
 Identities = 64/84 (76%), Positives = 75/84 (89%)
 Frame = -1

Query: 295 LDHPIWYIRTVGFPQSLIDSIASFTYKKGDGLIEGNDCSICLSDFQDDEVLRLLPKCSHA 116
           LDHPIWYI TVG  QS+IDSIA F YKK +GLIEG +CS+CL++FQ+DE LRLLPKCSHA
Sbjct: 54  LDHPIWYINTVGLQQSVIDSIAVFKYKKDEGLIEGTECSVCLNEFQEDESLRLLPKCSHA 113

Query: 115 FHVGCIDTWLRSHKNCPVCRAPIV 44
           FH+ CIDTWLRSHKNCP+CRAP++
Sbjct: 114 FHIPCIDTWLRSHKNCPLCRAPVI 137


>ref|XP_002323964.1| predicted protein [Populus trichocarpa] gi|222866966|gb|EEF04097.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score =  148 bits (374), Expect = 4e-34
 Identities = 64/92 (69%), Positives = 75/92 (81%)
 Frame = -1

Query: 295 LDHPIWYIRTVGFPQSLIDSIASFTYKKGDGLIEGNDCSICLSDFQDDEVLRLLPKCSHA 116
           +DHPIWYIRTVG   S+I SI    YK GDGL+EG +CS+CL++FQDDE LRLLPKCSHA
Sbjct: 2   VDHPIWYIRTVGLQPSVISSITVCKYKSGDGLVEGTECSVCLNEFQDDETLRLLPKCSHA 61

Query: 115 FHVGCIDTWLRSHKNCPVCRAPIVIATTTASN 20
           FH+ CIDTWLRSH NCP+CRAPIV  T  A++
Sbjct: 62  FHIPCIDTWLRSHTNCPLCRAPIVTNTDEATS 93


>ref|XP_004155494.1| PREDICTED: RING-H2 finger protein ATL54-like [Cucumis sativus]
          Length = 360

 Score =  146 bits (369), Expect = 2e-33
 Identities = 60/91 (65%), Positives = 77/91 (84%)
 Frame = -1

Query: 295 LDHPIWYIRTVGFPQSLIDSIASFTYKKGDGLIEGNDCSICLSDFQDDEVLRLLPKCSHA 116
           LDHPIWYIRT+G P ++ID+IA   +K G+GLI+G +CS+CLS+F++DE LRLLPKCSHA
Sbjct: 131 LDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPKCSHA 190

Query: 115 FHVGCIDTWLRSHKNCPVCRAPIVIATTTAS 23
           FH+ CIDTWLRSH NCP+CRAP+V  +  A+
Sbjct: 191 FHLPCIDTWLRSHTNCPMCRAPVVAQSAAAA 221


>ref|XP_004137067.1| PREDICTED: RING-H2 finger protein ATL54-like [Cucumis sativus]
          Length = 360

 Score =  146 bits (369), Expect = 2e-33
 Identities = 60/91 (65%), Positives = 77/91 (84%)
 Frame = -1

Query: 295 LDHPIWYIRTVGFPQSLIDSIASFTYKKGDGLIEGNDCSICLSDFQDDEVLRLLPKCSHA 116
           LDHPIWYIRT+G P ++ID+IA   +K G+GLI+G +CS+CLS+F++DE LRLLPKCSHA
Sbjct: 131 LDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPKCSHA 190

Query: 115 FHVGCIDTWLRSHKNCPVCRAPIVIATTTAS 23
           FH+ CIDTWLRSH NCP+CRAP+V  +  A+
Sbjct: 191 FHLPCIDTWLRSHTNCPMCRAPVVAQSAAAA 221


Top