BLASTX nr result

ID: Scutellaria24_contig00028682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00028682
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322006.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12
ref|XP_002322005.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
ref|XP_003588265.1| NADH-ubiquinone oxidoreductase chain [Medica...    42   1e-08
ref|XP_002534684.1| conserved hypothetical protein [Ricinus comm...    64   1e-08

>ref|XP_002322006.1| predicted protein [Populus trichocarpa] gi|222869002|gb|EEF06133.1|
           predicted protein [Populus trichocarpa]
          Length = 109

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 39/51 (76%), Positives = 42/51 (82%)
 Frame = +2

Query: 2   KKSHAYVTLTDGLIILDHEDPSRASGFHSHYHQYDKINLLVLCHKNLESVS 154
           KKSHAYVT+ DGLIILDHEDP  ASGFHSH+H    +NL VL HKNLESVS
Sbjct: 62  KKSHAYVTVIDGLIILDHEDPG-ASGFHSHHHM--TVNLFVLRHKNLESVS 109


>ref|XP_002322005.1| predicted protein [Populus trichocarpa] gi|222869001|gb|EEF06132.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = +2

Query: 2   KKSHAYVTLTDGLIILDHEDPSRASGFHSHYH 97
           KKSHAYVT+ DGLIILDHEDP RASGFHSH+H
Sbjct: 62  KKSHAYVTVIDGLIILDHEDPGRASGFHSHHH 93


>ref|XP_003588265.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477313|gb|AES58516.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 346

 Score = 41.6 bits (96), Expect(3) = 1e-08
 Identities = 19/21 (90%), Positives = 19/21 (90%)
 Frame = -3

Query: 194 FFEQESQPYLIFTMIRTPSSY 132
           FFEQESQ YL FTMIRTPSSY
Sbjct: 280 FFEQESQRYLTFTMIRTPSSY 300



 Score = 32.3 bits (72), Expect(3) = 1e-08
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = -2

Query: 234 RVGRANNSKAFGLFF 190
           RVGRANNS AFGLFF
Sbjct: 267 RVGRANNSNAFGLFF 281



 Score = 29.6 bits (65), Expect(3) = 1e-08
 Identities = 16/18 (88%), Positives = 16/18 (88%), Gaps = 1/18 (5%)
 Frame = -1

Query: 52  VQDNQTIS-KSNVSMRLF 2
           VQDNQTIS  SNVSMRLF
Sbjct: 307 VQDNQTISNSSNVSMRLF 324


>ref|XP_002534684.1| conserved hypothetical protein [Ricinus communis]
           gi|223524768|gb|EEF27698.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 261

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = +2

Query: 2   KKSHAYVTLTDGLIILDHEDPSRASGFHSHY 94
           KKSHAYVT+TDGLIILDHEDP RASGFHSH+
Sbjct: 221 KKSHAYVTVTDGLIILDHEDPGRASGFHSHH 251


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