BLASTX nr result

ID: Scutellaria24_contig00028655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00028655
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305003.1| predicted protein [Populus trichocarpa] gi|2...   168   5e-40
ref|XP_004134724.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...   167   1e-39
ref|XP_002521433.1| XPA-binding protein, putative [Ricinus commu...   166   1e-39
ref|XP_003635315.1| PREDICTED: pre-mRNA-splicing factor syf1-lik...   162   3e-38
emb|CAN65069.1| hypothetical protein VITISV_003952 [Vitis vinifera]   162   3e-38

>ref|XP_002305003.1| predicted protein [Populus trichocarpa] gi|222847967|gb|EEE85514.1|
           predicted protein [Populus trichocarpa]
          Length = 908

 Score =  168 bits (425), Expect = 5e-40
 Identities = 87/133 (65%), Positives = 95/133 (71%)
 Frame = -2

Query: 400 RDVFEEGMTTVITVRDFSVIFDAYSQFEESMLSIKXXXXXXXXXXXXXXXXXXXXXXXXX 221
           RD+FEEGMTTV+TVRDFSVIFDAYSQFEESM++IK                         
Sbjct: 269 RDIFEEGMTTVVTVRDFSVIFDAYSQFEESMVAIKMEKMDLSDDEENEVEENGIELDEDV 328

Query: 220 XDRLDIEKLRKRIDRFWLKDDKDVDLRLARLEYLMDRRPELANSVLLRQNPHNVEQWHRR 41
                 +  +K ++ FWL DD DVDL LARLEYLMDRRPELANSVLLRQNPHNVEQWHRR
Sbjct: 329 RLDWSSKFEKKLLNGFWLDDDNDVDLMLARLEYLMDRRPELANSVLLRQNPHNVEQWHRR 388

Query: 40  VKLFEGNPTKQIL 2
           VKLFEGNPTKQIL
Sbjct: 389 VKLFEGNPTKQIL 401


>ref|XP_004134724.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Cucumis sativus]
          Length = 912

 Score =  167 bits (422), Expect = 1e-39
 Identities = 87/138 (63%), Positives = 99/138 (71%), Gaps = 5/138 (3%)
 Frame = -2

Query: 400 RDVFEEGMTTVITVRDFSVIFDAYSQFEESMLSIKXXXXXXXXXXXXXXXXXXXXXXXXX 221
           RD+FEEGMTTV+TVRDFSVIFD+YSQFEESML+ K                         
Sbjct: 269 RDIFEEGMTTVVTVRDFSVIFDSYSQFEESMLAHKMENMDLSDEEDEVQENGLEEEEEEE 328

Query: 220 XDRLDIE----KLRKRI-DRFWLKDDKDVDLRLARLEYLMDRRPELANSVLLRQNPHNVE 56
             RLD++    K  K+I   FWL DD D+DLRLARL++LMDRRPELANSVLLRQNPHNVE
Sbjct: 329 DIRLDVDLSVSKFEKKILQGFWLYDDNDIDLRLARLDHLMDRRPELANSVLLRQNPHNVE 388

Query: 55  QWHRRVKLFEGNPTKQIL 2
           QWHRR+KLFEGNPT+QIL
Sbjct: 389 QWHRRIKLFEGNPTRQIL 406


>ref|XP_002521433.1| XPA-binding protein, putative [Ricinus communis]
           gi|223539332|gb|EEF40923.1| XPA-binding protein,
           putative [Ricinus communis]
          Length = 916

 Score =  166 bits (421), Expect = 1e-39
 Identities = 85/133 (63%), Positives = 96/133 (72%)
 Frame = -2

Query: 400 RDVFEEGMTTVITVRDFSVIFDAYSQFEESMLSIKXXXXXXXXXXXXXXXXXXXXXXXXX 221
           RD+FEEGMTTV+TVRDFSVIFDAYSQFEESM++ K                         
Sbjct: 269 RDIFEEGMTTVVTVRDFSVIFDAYSQFEESMVAHKMESLDLSDDEGEALEESGDEKDEDV 328

Query: 220 XDRLDIEKLRKRIDRFWLKDDKDVDLRLARLEYLMDRRPELANSVLLRQNPHNVEQWHRR 41
              ++ +  +K ++ FWL +D DVDL LARLEYLMDRRPELANSVLLRQNPHNVEQWHRR
Sbjct: 329 RLEVNSKFEKKMLNGFWLHEDNDVDLMLARLEYLMDRRPELANSVLLRQNPHNVEQWHRR 388

Query: 40  VKLFEGNPTKQIL 2
           VKLFEGNPTKQIL
Sbjct: 389 VKLFEGNPTKQIL 401


>ref|XP_003635315.1| PREDICTED: pre-mRNA-splicing factor syf1-like [Vitis vinifera]
          Length = 816

 Score =  162 bits (410), Expect = 3e-38
 Identities = 89/138 (64%), Positives = 96/138 (69%), Gaps = 5/138 (3%)
 Frame = -2

Query: 400 RDVFEEGMTTVITVRDFSVIFDAYSQFEESMLSIKXXXXXXXXXXXXXXXXXXXXXXXXX 221
           RD+FEEGMTTV+TVRDFSVIFDAYSQFEESML+ K                         
Sbjct: 269 RDIFEEGMTTVVTVRDFSVIFDAYSQFEESMLAYK---MENMDSDEEEDDVQDNDTDEEE 325

Query: 220 XDRLDIEKL-----RKRIDRFWLKDDKDVDLRLARLEYLMDRRPELANSVLLRQNPHNVE 56
             RLDI        +K +  FWL D  DVDLRLARLE+LMDRRPELANSVLLRQNPHNVE
Sbjct: 326 DIRLDINLSVANFEKKILHGFWLHDFNDVDLRLARLEHLMDRRPELANSVLLRQNPHNVE 385

Query: 55  QWHRRVKLFEGNPTKQIL 2
           QWHRR+KLFEGNPTKQIL
Sbjct: 386 QWHRRIKLFEGNPTKQIL 403


>emb|CAN65069.1| hypothetical protein VITISV_003952 [Vitis vinifera]
          Length = 920

 Score =  162 bits (410), Expect = 3e-38
 Identities = 90/138 (65%), Positives = 97/138 (70%), Gaps = 5/138 (3%)
 Frame = -2

Query: 400 RDVFEEGMTTVITVRDFSVIFDAYSQFEESMLSIKXXXXXXXXXXXXXXXXXXXXXXXXX 221
           RD+FEEGMTTV+TVRDFSVIFDAYSQFEESML+ K                         
Sbjct: 269 RDIFEEGMTTVVTVRDFSVIFDAYSQFEESMLAYK---MENMDSDEEEDDVQDNDTDEEX 325

Query: 220 XDRLDIEKL-----RKRIDRFWLKDDKDVDLRLARLEYLMDRRPELANSVLLRQNPHNVE 56
             RLDI        +K +  FWL D  DVDLRLARLE+LMDRRPELANSVLLRQNPHNVE
Sbjct: 326 DIRLDINLSVANFEKKILHGFWLHDFNDVDLRLARLEHLMDRRPELANSVLLRQNPHNVE 385

Query: 55  QWHRRVKLFEGNPTKQIL 2
           QWHRR+KLFEGNPTKQIL
Sbjct: 386 QWHRRIKLFEGNPTKQIL 403


Top