BLASTX nr result

ID: Scutellaria24_contig00028533 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00028533
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283191.1| PREDICTED: pumilio homolog 1-like [Vitis vin...   158   4e-37
emb|CAN61602.1| hypothetical protein VITISV_024967 [Vitis vinifera]   158   4e-37
ref|XP_002299859.1| predicted protein [Populus trichocarpa] gi|2...   138   5e-31
ref|XP_003597396.1| Pumilio-like protein [Medicago truncatula] g...   134   6e-30
ref|XP_003606712.1| Pumilio-like protein [Medicago truncatula] g...   134   8e-30

>ref|XP_002283191.1| PREDICTED: pumilio homolog 1-like [Vitis vinifera]
          Length = 1065

 Score =  158 bits (400), Expect = 4e-37
 Identities = 80/130 (61%), Positives = 97/130 (74%), Gaps = 4/130 (3%)
 Frame = +1

Query: 31  SREDWRFTQRLQGGSSA---IGDRRKVNRNDSGNSGRSLFSVSPSFNSKEQEIE-NGDKL 198
           S+EDWRF QRL+GGSS    IGDRRK+NRNDSG+ GRS++S+ P FNS+++E E + +KL
Sbjct: 118 SKEDWRFAQRLKGGSSGLGGIGDRRKMNRNDSGSVGRSMYSMPPGFNSRKEETEADSEKL 177

Query: 199 QGSVEWXXXXXXXXXXXXXXSKQKSLADIFQDNMNHSTPISGHPSRPASRNAFDENASGL 378
            GS EW              SKQKSLA+IFQD++  +TP+SGHPSRPASRNAFDENA  L
Sbjct: 178 CGSAEWGGDGLIGLSGLGLGSKQKSLAEIFQDDLGRTTPVSGHPSRPASRNAFDENAEPL 237

Query: 379 GSAEAELAHL 408
           GS EAEL HL
Sbjct: 238 GSVEAELGHL 247


>emb|CAN61602.1| hypothetical protein VITISV_024967 [Vitis vinifera]
          Length = 1039

 Score =  158 bits (400), Expect = 4e-37
 Identities = 80/130 (61%), Positives = 97/130 (74%), Gaps = 4/130 (3%)
 Frame = +1

Query: 31  SREDWRFTQRLQGGSSA---IGDRRKVNRNDSGNSGRSLFSVSPSFNSKEQEIE-NGDKL 198
           S+EDWRF QRL+GGSS    IGDRRK+NRNDSG+ GRS++S+ P FNS+++E E + +KL
Sbjct: 92  SKEDWRFAQRLKGGSSGLGGIGDRRKMNRNDSGSVGRSMYSMPPGFNSRKEETEADSEKL 151

Query: 199 QGSVEWXXXXXXXXXXXXXXSKQKSLADIFQDNMNHSTPISGHPSRPASRNAFDENASGL 378
            GS EW              SKQKSLA+IFQD++  +TP+SGHPSRPASRNAFDENA  L
Sbjct: 152 CGSAEWGGEGLIGLSGLGLGSKQKSLAEIFQDDLGRTTPVSGHPSRPASRNAFDENAEPL 211

Query: 379 GSAEAELAHL 408
           GS EAEL HL
Sbjct: 212 GSVEAELGHL 221


>ref|XP_002299859.1| predicted protein [Populus trichocarpa] gi|222847117|gb|EEE84664.1|
           predicted protein [Populus trichocarpa]
          Length = 1065

 Score =  138 bits (347), Expect = 5e-31
 Identities = 74/130 (56%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
 Frame = +1

Query: 31  SREDWRFTQRLQGGSSA---IGDRRKVNRNDSGNSGRSLFSVSPSFNSKEQEIE-NGDKL 198
           S+EDWR  QRL+GGSS    IGDRRK +R DSGN GRS+FS+ P F S+ Q+ E   +K+
Sbjct: 122 SKEDWRSAQRLKGGSSVLGGIGDRRKGSRADSGN-GRSMFSMPPGFESRNQDSEVESEKV 180

Query: 199 QGSVEWXXXXXXXXXXXXXXSKQKSLADIFQDNMNHSTPISGHPSRPASRNAFDENASGL 378
            GS+EW              SKQKS A+IFQD++  +TP++G PSRPASRNAF+EN   L
Sbjct: 181 SGSLEWGGDGLIGLPGLGLASKQKSFAEIFQDDLGRATPVTGPPSRPASRNAFNENVETL 240

Query: 379 GSAEAELAHL 408
           GSAEAELAHL
Sbjct: 241 GSAEAELAHL 250


>ref|XP_003597396.1| Pumilio-like protein [Medicago truncatula]
           gi|87241276|gb|ABD33134.1| Nucleic acid binding NABP
           [Medicago truncatula] gi|355486444|gb|AES67647.1|
           Pumilio-like protein [Medicago truncatula]
          Length = 1047

 Score =  134 bits (338), Expect = 6e-30
 Identities = 71/131 (54%), Positives = 91/131 (69%), Gaps = 5/131 (3%)
 Frame = +1

Query: 31  SREDWRFTQRLQGGSSAIG---DRRKVNRNDSGNSGRSLFSVSPSFNSKEQEIE--NGDK 195
           S+EDWRF+QRL+GG+SAIG   DRRKVN  D  N GR++F+  P FN++++E E    +K
Sbjct: 119 SKEDWRFSQRLKGGASAIGGIGDRRKVNGADE-NGGRAVFATPPGFNNRKRETEVVADEK 177

Query: 196 LQGSVEWXXXXXXXXXXXXXXSKQKSLADIFQDNMNHSTPISGHPSRPASRNAFDENASG 375
           ++GS EW              +KQKSLA+IFQD+M H+T ++G PSRPASRN FDEN   
Sbjct: 178 IRGSAEWGGDGLIGLPGLGLGTKQKSLAEIFQDDMGHNTSVTGFPSRPASRNTFDENVEI 237

Query: 376 LGSAEAELAHL 408
             SAEAELAHL
Sbjct: 238 TSSAEAELAHL 248


>ref|XP_003606712.1| Pumilio-like protein [Medicago truncatula]
           gi|355507767|gb|AES88909.1| Pumilio-like protein
           [Medicago truncatula]
          Length = 1025

 Score =  134 bits (337), Expect = 8e-30
 Identities = 73/134 (54%), Positives = 92/134 (68%), Gaps = 6/134 (4%)
 Frame = +1

Query: 31  SREDWRFTQRLQGGSSA---IGDRRKVNRNDSGNSGRSLFSVSPSFNSKEQE---IENGD 192
           S+EDWRF QRL+GG+SA   IGDRRK N  D  + GRS+FS  P FN ++QE   +EN +
Sbjct: 121 SKEDWRFQQRLKGGASAVGGIGDRRKGNMTDD-SGGRSMFSTPPGFNFRKQERSEVEN-E 178

Query: 193 KLQGSVEWXXXXXXXXXXXXXXSKQKSLADIFQDNMNHSTPISGHPSRPASRNAFDENAS 372
           K +GS EW              SKQKSLA+IFQD+M  +TP++G PSRPASRNAFDEN  
Sbjct: 179 KTRGSAEWGGDGLIGLPSLGLRSKQKSLAEIFQDDMERNTPVTGLPSRPASRNAFDENVD 238

Query: 373 GLGSAEAELAHLYG 414
            + ++EAELAH+ G
Sbjct: 239 KVNTSEAELAHVQG 252


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