BLASTX nr result

ID: Scutellaria24_contig00028500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00028500
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551498.1| PREDICTED: probable E3 ubiquitin-protein lig...   126   2e-27
ref|XP_002271900.2| PREDICTED: probable E3 ubiquitin-protein lig...   124   1e-26
emb|CBI30505.3| unnamed protein product [Vitis vinifera]              124   1e-26
ref|XP_003552762.1| PREDICTED: probable E3 ubiquitin-protein lig...   123   2e-26
ref|XP_003538429.1| PREDICTED: probable E3 ubiquitin-protein lig...   121   5e-26

>ref|XP_003551498.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 525

 Score =  126 bits (317), Expect = 2e-27
 Identities = 57/91 (62%), Positives = 71/91 (78%)
 Frame = -1

Query: 322 WGSADDQGQSYLTSGKHGENPEVYPLSTADPIVKAAAGWAHCVSVTDKGEVYAWGWKECV 143
           WGSADD+GQSYL SGKHGE P +Y L T   +VKAAAGWAHC SVT++GEVYAWGWKECV
Sbjct: 121 WGSADDEGQSYLISGKHGEIPGLYQLPTEASVVKAAAGWAHCASVTEEGEVYAWGWKECV 180

Query: 142 PSVKIGRSWTSVKTCEDETATKQSSTMTEEG 50
           PS K+   + +V + + + A KQSS++ E+G
Sbjct: 181 PSGKVITDFITVGSLQKDIAGKQSSSIAEQG 211


>ref|XP_002271900.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like isoform
           1 [Vitis vinifera]
          Length = 514

 Score =  124 bits (310), Expect = 1e-26
 Identities = 59/90 (65%), Positives = 67/90 (74%)
 Frame = -1

Query: 322 WGSADDQGQSYLTSGKHGENPEVYPLSTADPIVKAAAGWAHCVSVTDKGEVYAWGWKECV 143
           WGS DD GQSYLTSG+HGE PE +PL T  PIVKAAAGWAHCVS+TDKGE Y WGWKECV
Sbjct: 92  WGSEDDLGQSYLTSGQHGETPEPFPLPTEAPIVKAAAGWAHCVSLTDKGEAYTWGWKECV 151

Query: 142 PSVKIGRSWTSVKTCEDETATKQSSTMTEE 53
           PS K+    T V+  E ++  KQS   TE+
Sbjct: 152 PSGKVLLDSTGVR-FEKDSFGKQSLLQTEQ 180


>emb|CBI30505.3| unnamed protein product [Vitis vinifera]
          Length = 478

 Score =  124 bits (310), Expect = 1e-26
 Identities = 59/90 (65%), Positives = 67/90 (74%)
 Frame = -1

Query: 322 WGSADDQGQSYLTSGKHGENPEVYPLSTADPIVKAAAGWAHCVSVTDKGEVYAWGWKECV 143
           WGS DD GQSYLTSG+HGE PE +PL T  PIVKAAAGWAHCVS+TDKGE Y WGWKECV
Sbjct: 56  WGSEDDLGQSYLTSGQHGETPEPFPLPTEAPIVKAAAGWAHCVSLTDKGEAYTWGWKECV 115

Query: 142 PSVKIGRSWTSVKTCEDETATKQSSTMTEE 53
           PS K+    T V+  E ++  KQS   TE+
Sbjct: 116 PSGKVLLDSTGVR-FEKDSFGKQSLLQTEQ 144


>ref|XP_003552762.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Glycine max]
          Length = 472

 Score =  123 bits (308), Expect = 2e-26
 Identities = 60/91 (65%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
 Frame = -1

Query: 322 WGSADDQGQSYLTSGKHGENPEVYPLSTADPIVKAAAGWAHCVSVTDKGEVYAWGWKECV 143
           WGS DD GQSY+TSGKHGE PE +PL T   IVKAAAGWAHCVSVTD GEVY WGW+ECV
Sbjct: 71  WGSTDDLGQSYVTSGKHGETPEPFPLPTEVTIVKAAAGWAHCVSVTDCGEVYTWGWRECV 130

Query: 142 PSVKI-GRSWTSVKTCEDETATKQSSTMTEE 53
           PS K+ G S T V   E +   +QSS +TE+
Sbjct: 131 PSGKVFGESLTGVSP-EKDVPRRQSSFLTEQ 160


>ref|XP_003538429.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 480

 Score =  121 bits (304), Expect = 5e-26
 Identities = 60/91 (65%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
 Frame = -1

Query: 322 WGSADDQGQSYLTSGKHGENPEVYPLSTADPIVKAAAGWAHCVSVTDKGEVYAWGWKECV 143
           WGS DD GQSY+TSGKHGE PE +PL T   IVKAAAGWAHCVSVTD GEVY WGW+ECV
Sbjct: 75  WGSTDDLGQSYVTSGKHGEIPEPFPLPTEVTIVKAAAGWAHCVSVTDCGEVYTWGWRECV 134

Query: 142 PSVKI-GRSWTSVKTCEDETATKQSSTMTEE 53
           PS K+ G S T V   E +   +QSS +TE+
Sbjct: 135 PSGKVFGESLTGVSP-EKDVPGRQSSFLTEQ 164


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