BLASTX nr result

ID: Scutellaria24_contig00028481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00028481
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   109   3e-22
ref|XP_002512794.1| dead box ATP-dependent RNA helicase, putativ...   105   4e-21
ref|XP_002320399.1| predicted protein [Populus trichocarpa] gi|2...   100   9e-20
ref|XP_004167588.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    91   7e-17
ref|XP_004145645.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    90   2e-16

>ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Vitis
           vinifera]
          Length = 540

 Score =  109 bits (272), Expect = 3e-22
 Identities = 55/92 (59%), Positives = 65/92 (70%)
 Frame = +2

Query: 2   ETDDDICSIECKKSLLSQVAKSKASRAQPSSIKLPARDECFYVRDGNSNSEPQCVTNSQT 181
           ETDDDICS+ECK++LL +VAKS+     P   +LP  DECFYVRD    S  Q +T SQT
Sbjct: 57  ETDDDICSLECKQTLLCRVAKSRLPVVLPPPKRLPTTDECFYVRDSGDKSGSQSLTGSQT 116

Query: 182 EQLRRKLEISVKGVNVPEPILSFASCNLPPKL 277
           E LRR+LEI V+G     PILSF+SCNLP KL
Sbjct: 117 EMLRRRLEICVRGDFDLSPILSFSSCNLPQKL 148


>ref|XP_002512794.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223547805|gb|EEF49297.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 514

 Score =  105 bits (262), Expect = 4e-21
 Identities = 56/92 (60%), Positives = 65/92 (70%)
 Frame = +2

Query: 2   ETDDDICSIECKKSLLSQVAKSKASRAQPSSIKLPARDECFYVRDGNSNSEPQCVTNSQT 181
           ETDDDICS+ECK+ LL  V KS  S   P   +L A DECFYVR+  ++S    +TN QT
Sbjct: 44  ETDDDICSLECKQILLGGVGKSDISVGIPPPRRLAATDECFYVRENGTSS----LTNDQT 99

Query: 182 EQLRRKLEISVKGVNVPEPILSFASCNLPPKL 277
           E LRR LEI VKG  VP+PILSF+SCNLP KL
Sbjct: 100 ELLRRTLEIHVKGELVPDPILSFSSCNLPQKL 131


>ref|XP_002320399.1| predicted protein [Populus trichocarpa] gi|222861172|gb|EEE98714.1|
           predicted protein [Populus trichocarpa]
          Length = 524

 Score =  100 bits (250), Expect = 9e-20
 Identities = 52/92 (56%), Positives = 64/92 (69%)
 Frame = +2

Query: 2   ETDDDICSIECKKSLLSQVAKSKASRAQPSSIKLPARDECFYVRDGNSNSEPQCVTNSQT 181
           +TD DICS+ECK++LL + A +      P   +L A DECFYVRD  S      +T+ QT
Sbjct: 49  QTDSDICSLECKQTLLGRAADTHLPVGHPLPKRLAATDECFYVRDSESP-----LTSDQT 103

Query: 182 EQLRRKLEISVKGVNVPEPILSFASCNLPPKL 277
           E LRRKLEI VKG +VP+PILSF+SCNLP KL
Sbjct: 104 ELLRRKLEIHVKGDSVPDPILSFSSCNLPEKL 135


>ref|XP_004167588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Cucumis
           sativus]
          Length = 532

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 50/92 (54%), Positives = 63/92 (68%)
 Frame = +2

Query: 2   ETDDDICSIECKKSLLSQVAKSKASRAQPSSIKLPARDECFYVRDGNSNSEPQCVTNSQT 181
           ETDDD+CS+ECK+S+L +VA + A    PS  +LPA DECFYV++ N +S   C    QT
Sbjct: 57  ETDDDVCSMECKQSVLRKVANTMAPDKAPSK-RLPAADECFYVKESNYSSSLTC---EQT 112

Query: 182 EQLRRKLEISVKGVNVPEPILSFASCNLPPKL 277
           E LR+KL IS+KG     PILSF+  NLP KL
Sbjct: 113 EMLRKKLGISIKGDLDCAPILSFSFGNLPQKL 144


>ref|XP_004145645.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Cucumis
           sativus]
          Length = 532

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 49/92 (53%), Positives = 62/92 (67%)
 Frame = +2

Query: 2   ETDDDICSIECKKSLLSQVAKSKASRAQPSSIKLPARDECFYVRDGNSNSEPQCVTNSQT 181
           ETDDD+CS+ECK+S+L +VA + A    PS  +LPA DECFYV++ N +    C    QT
Sbjct: 57  ETDDDVCSMECKQSVLRKVANTMAPDKAPSK-RLPAADECFYVKESNYSGSLTC---EQT 112

Query: 182 EQLRRKLEISVKGVNVPEPILSFASCNLPPKL 277
           E LR+KL IS+KG     PILSF+  NLP KL
Sbjct: 113 EMLRKKLGISIKGDLDCAPILSFSFGNLPQKL 144


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