BLASTX nr result

ID: Scutellaria24_contig00028385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00028385
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551050.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    65   7e-09
ref|XP_003529680.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    58   9e-07
ref|XP_003631587.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    56   3e-06
emb|CBI38032.3| unnamed protein product [Vitis vinifera]               56   3e-06
ref|XP_002322111.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_003551050.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like isoform 1
           [Glycine max] gi|356565649|ref|XP_003551051.1|
           PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like
           isoform 2 [Glycine max]
          Length = 706

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 34/62 (54%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
 Frame = +3

Query: 87  MKRATDNVLDKLEG-VKKPVFLTKEERQKLALQRRQEEVGEQKRRAELLLHSNNGTDSRP 263
           MKR+ D+V   +     KPVFLTK +R++LALQRRQEEV +QKRR E LL  N+ +D +P
Sbjct: 1   MKRSNDDVAAPVPASTSKPVFLTKAQREQLALQRRQEEVADQKRRQEQLLSRNHSSDPKP 60

Query: 264 YS 269
            S
Sbjct: 61  SS 62


>ref|XP_003529680.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Glycine
           max]
          Length = 701

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/56 (53%), Positives = 40/56 (71%)
 Frame = +3

Query: 87  MKRATDNVLDKLEGVKKPVFLTKEERQKLALQRRQEEVGEQKRRAELLLHSNNGTD 254
           MKR+ D+V   +    KPVFLTK +R++LALQRR E+V +QKRR E LL  N+ +D
Sbjct: 1   MKRSNDDVAAPVS-TAKPVFLTKAQREQLALQRRHEDVADQKRRQEQLLSRNHSSD 55


>ref|XP_003631587.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Vitis
           vinifera]
          Length = 712

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 8/71 (11%)
 Frame = +3

Query: 87  MKRATDN-----VLDKLEGVKKPVFLTKEERQKLALQRRQEEVGEQKRRAE---LLLHSN 242
           MKR+ +      ++     +KKPVFLTK +R++LALQRR EE+ EQKRRAE   L   S+
Sbjct: 1   MKRSIEEDISTTIVSAATNMKKPVFLTKAQREQLALQRRHEEIAEQKRRAEQQLLQARSS 60

Query: 243 NGTDSRPYSST 275
           +G  S   +ST
Sbjct: 61  SGNHSSHAAST 71


>emb|CBI38032.3| unnamed protein product [Vitis vinifera]
          Length = 797

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 8/71 (11%)
 Frame = +3

Query: 87  MKRATDN-----VLDKLEGVKKPVFLTKEERQKLALQRRQEEVGEQKRRAE---LLLHSN 242
           MKR+ +      ++     +KKPVFLTK +R++LALQRR EE+ EQKRRAE   L   S+
Sbjct: 47  MKRSIEEDISTTIVSAATNMKKPVFLTKAQREQLALQRRHEEIAEQKRRAEQQLLQARSS 106

Query: 243 NGTDSRPYSST 275
           +G  S   +ST
Sbjct: 107 SGNHSSHAAST 117


>ref|XP_002322111.1| predicted protein [Populus trichocarpa] gi|222869107|gb|EEF06238.1|
           predicted protein [Populus trichocarpa]
          Length = 710

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/67 (49%), Positives = 48/67 (71%), Gaps = 5/67 (7%)
 Frame = +3

Query: 87  MKRATDNV-LDKLEGVKKPVFLTKEERQKLALQRRQEEVGEQKRRAELLLH----SNNGT 251
           MKR+ D++ + K +   KPVFLTK +R++LALQRRQEE+ +QK+R +LLL     SN+ +
Sbjct: 1   MKRSFDDIGVSKTQS--KPVFLTKAQREQLALQRRQEEIEQQKKRQQLLLSQTRPSNSES 58

Query: 252 DSRPYSS 272
           D  P +S
Sbjct: 59  DKPPSNS 65


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