BLASTX nr result

ID: Scutellaria24_contig00028306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00028306
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148818.1| PREDICTED: putative transcription elongation...   150   8e-35
ref|XP_002313759.1| global transcription factor group [Populus t...   148   5e-34
ref|XP_002526173.1| suppressor of ty, putative [Ricinus communis...   147   9e-34
ref|XP_002872391.1| hypothetical protein ARALYDRAFT_327088 [Arab...   146   2e-33
ref|XP_003634397.1| PREDICTED: putative transcription elongation...   145   3e-33

>ref|XP_004148818.1| PREDICTED: putative transcription elongation factor SPT5 homolog
           1-like [Cucumis sativus]
          Length = 1044

 Score =  150 bits (380), Expect = 8e-35
 Identities = 70/82 (85%), Positives = 78/82 (95%)
 Frame = -1

Query: 247 RSLNVEYDDEATDVEQQALLPSVRDPKLWMVKCAIGREREVAVCLMQKCIDKGPELQIRS 68
           RS ++EYD+E T+VEQQALLPSVRDPKLWMVKCAIGRERE AVCLMQKCID+GPE+QIRS
Sbjct: 154 RSNHMEYDEETTEVEQQALLPSVRDPKLWMVKCAIGREREAAVCLMQKCIDRGPEMQIRS 213

Query: 67  VIALDHLKNYIYIEADKEAHVR 2
            +ALDHLKN+IYIEADKEAHVR
Sbjct: 214 AVALDHLKNFIYIEADKEAHVR 235


>ref|XP_002313759.1| global transcription factor group [Populus trichocarpa]
           gi|222850167|gb|EEE87714.1| global transcription factor
           group [Populus trichocarpa]
          Length = 1042

 Score =  148 bits (373), Expect = 5e-34
 Identities = 71/82 (86%), Positives = 77/82 (93%)
 Frame = -1

Query: 247 RSLNVEYDDEATDVEQQALLPSVRDPKLWMVKCAIGREREVAVCLMQKCIDKGPELQIRS 68
           +S++ EYD+E T+VEQQALLPSVRDPKLWMVKCAIGRERE AVCLMQK IDKG ELQIRS
Sbjct: 162 KSMHSEYDEETTEVEQQALLPSVRDPKLWMVKCAIGRERETAVCLMQKYIDKGSELQIRS 221

Query: 67  VIALDHLKNYIYIEADKEAHVR 2
           V+ALDHLKNYIYIEADKEAHVR
Sbjct: 222 VVALDHLKNYIYIEADKEAHVR 243


>ref|XP_002526173.1| suppressor of ty, putative [Ricinus communis]
           gi|223534550|gb|EEF36249.1| suppressor of ty, putative
           [Ricinus communis]
          Length = 1045

 Score =  147 bits (371), Expect = 9e-34
 Identities = 72/82 (87%), Positives = 75/82 (91%)
 Frame = -1

Query: 247 RSLNVEYDDEATDVEQQALLPSVRDPKLWMVKCAIGREREVAVCLMQKCIDKGPELQIRS 68
           RS + EYD+E T+VEQQALLPSVRDPKLWMVKCAIGRERE AVCLMQK IDKG ELQIRS
Sbjct: 158 RSSHTEYDEETTEVEQQALLPSVRDPKLWMVKCAIGRERETAVCLMQKYIDKGSELQIRS 217

Query: 67  VIALDHLKNYIYIEADKEAHVR 2
            IALDHLKNYIYIEADKEAHVR
Sbjct: 218 AIALDHLKNYIYIEADKEAHVR 239


>ref|XP_002872391.1| hypothetical protein ARALYDRAFT_327088 [Arabidopsis lyrata subsp.
           lyrata] gi|297318228|gb|EFH48650.1| hypothetical protein
           ARALYDRAFT_327088 [Arabidopsis lyrata subsp. lyrata]
          Length = 1051

 Score =  146 bits (368), Expect = 2e-33
 Identities = 69/77 (89%), Positives = 75/77 (97%)
 Frame = -1

Query: 232 EYDDEATDVEQQALLPSVRDPKLWMVKCAIGREREVAVCLMQKCIDKGPELQIRSVIALD 53
           EYD+EATDVEQQALLPSVRDPKLWMVKCAIGREREVAVCLMQK ID+G +LQIRSV+ALD
Sbjct: 159 EYDEEATDVEQQALLPSVRDPKLWMVKCAIGREREVAVCLMQKFIDRGADLQIRSVVALD 218

Query: 52  HLKNYIYIEADKEAHVR 2
           HLKNYIY+EADKEAHV+
Sbjct: 219 HLKNYIYVEADKEAHVK 235


>ref|XP_003634397.1| PREDICTED: putative transcription elongation factor SPT5 homolog
           1-like isoform 2 [Vitis vinifera]
          Length = 1044

 Score =  145 bits (366), Expect = 3e-33
 Identities = 69/82 (84%), Positives = 75/82 (91%)
 Frame = -1

Query: 247 RSLNVEYDDEATDVEQQALLPSVRDPKLWMVKCAIGREREVAVCLMQKCIDKGPELQIRS 68
           +S + EYD+E T+VEQQALLPSVRDPKLWMVKCAIG ERE AVCLMQK IDKGPE+QIRS
Sbjct: 150 KSSHAEYDEETTEVEQQALLPSVRDPKLWMVKCAIGHEREAAVCLMQKSIDKGPEVQIRS 209

Query: 67  VIALDHLKNYIYIEADKEAHVR 2
            IALDHLKNYIYIEADKEAHV+
Sbjct: 210 AIALDHLKNYIYIEADKEAHVK 231


Top