BLASTX nr result

ID: Scutellaria24_contig00028290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00028290
         (708 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517770.1| structural maintenance of chromosomes 5 smc5...   308   7e-82
ref|XP_002272410.1| PREDICTED: structural maintenance of chromos...   294   1e-77
ref|XP_004158182.1| PREDICTED: LOW QUALITY PROTEIN: structural m...   287   1e-75
ref|XP_004135946.1| PREDICTED: structural maintenance of chromos...   286   2e-75
ref|NP_197096.1| structural maintenance of chromosomes 5 [Arabid...   270   3e-70

>ref|XP_002517770.1| structural maintenance of chromosomes 5 smc5, putative [Ricinus
            communis] gi|223543042|gb|EEF44577.1| structural
            maintenance of chromosomes 5 smc5, putative [Ricinus
            communis]
          Length = 1057

 Score =  308 bits (789), Expect = 7e-82
 Identities = 150/236 (63%), Positives = 187/236 (79%)
 Frame = +1

Query: 1    PVLLEVNVANRLHADYLEGHVSYYIWKSFITQNSDDRDLLVKNLKPFDVPVINHVGNECS 180
            PVLLEVNV++R+HADYLEG V YYIWKSFITQ+  DRD+LVKNLK FDVP++N+V +E  
Sbjct: 464  PVLLEVNVSDRMHADYLEGQVPYYIWKSFITQDPTDRDVLVKNLKAFDVPILNYVRDESH 523

Query: 181  HRDALRTTDEMHRLGISSRLDQVFEAPHAVKEVLIGQFGLDSSYIGSKESDEKADMVLKL 360
             ++A + +++MH LGI SRLDQVF+APHAVKEVLI QFGLD SYIGSKE+D+KAD V KL
Sbjct: 524  PKEAFQVSEKMHELGIYSRLDQVFDAPHAVKEVLISQFGLDRSYIGSKETDQKADEVAKL 583

Query: 361  GIMDLWTPENHYRWFKSRYGNHVSGNVEAVDRSRFLFCNLDVKEIETLKSRQIELNETIS 540
             I D WTPENHYRW  SRYG HVSG+VE VDRSR L C+ D  EIE LK R+ EL E+++
Sbjct: 584  KIWDFWTPENHYRWSPSRYGGHVSGSVEPVDRSRLLLCSSDSGEIERLKCRKHELQESVT 643

Query: 541  AIEADLKALQFTLRQKEDDAAELRHERDEIVDIIKRQMKKRKEMEQLVNQRRMKLK 708
            A+E   K LQ   RQ E++ AEL+ ER+EI+  ++ + +KRK+ME LVNQR+ KL+
Sbjct: 644  ALEESFKVLQREQRQLENEEAELQKEREEIISNVQHEKRKRKDMENLVNQRKRKLE 699


>ref|XP_002272410.1| PREDICTED: structural maintenance of chromosomes protein 5 [Vitis
            vinifera] gi|297736324|emb|CBI24962.3| unnamed protein
            product [Vitis vinifera]
          Length = 1051

 Score =  294 bits (753), Expect = 1e-77
 Identities = 142/236 (60%), Positives = 184/236 (77%)
 Frame = +1

Query: 1    PVLLEVNVANRLHADYLEGHVSYYIWKSFITQNSDDRDLLVKNLKPFDVPVINHVGNECS 180
            PVLLEVNV++R+HADYLEGH+ YYIWKSFITQ+ DDRD LVKNL+ FDVPV+N+V NE  
Sbjct: 456  PVLLEVNVSHRIHADYLEGHIPYYIWKSFITQDPDDRDFLVKNLRLFDVPVLNYVRNEDR 515

Query: 181  HRDALRTTDEMHRLGISSRLDQVFEAPHAVKEVLIGQFGLDSSYIGSKESDEKADMVLKL 360
            H++  + ++EM +LGISSRLDQVF++P AVKEVL  QF L+ SYIGS+E+D+KAD V KL
Sbjct: 516  HKEPFQISEEMRKLGISSRLDQVFDSPDAVKEVLTSQFALEHSYIGSRETDQKADEVSKL 575

Query: 361  GIMDLWTPENHYRWFKSRYGNHVSGNVEAVDRSRFLFCNLDVKEIETLKSRQIELNETIS 540
            GI+D WTPENHYRW  SRYG HVS  VE V RSR L C+ D  EIE L+S++ EL E I 
Sbjct: 576  GILDFWTPENHYRWSVSRYGGHVSAIVEPVARSRLLVCSTDTGEIERLRSKKKELEEIID 635

Query: 541  AIEADLKALQFTLRQKEDDAAELRHERDEIVDIIKRQMKKRKEMEQLVNQRRMKLK 708
             +E + K+LQ   R  ED+AA+L  +R+EI++ ++ + +KR+EME  V+QR+ KL+
Sbjct: 636  DLEENFKSLQIEQRLLEDEAAKLHKQREEIINTVQLEKRKRREMENRVSQRKRKLE 691


>ref|XP_004158182.1| PREDICTED: LOW QUALITY PROTEIN: structural maintenance of chromosomes
            protein 5-like [Cucumis sativus]
          Length = 1053

 Score =  287 bits (735), Expect = 1e-75
 Identities = 137/236 (58%), Positives = 182/236 (77%)
 Frame = +1

Query: 1    PVLLEVNVANRLHADYLEGHVSYYIWKSFITQNSDDRDLLVKNLKPFDVPVINHVGNECS 180
            PVLLEVNV+NR HADYLEGH+  Y+WKSFITQ+S DRD++VKNL  F VPV+N+VG E  
Sbjct: 458  PVLLEVNVSNRTHADYLEGHIPSYVWKSFITQDSHDRDIMVKNLGSFGVPVLNYVGGERR 517

Query: 181  HRDALRTTDEMHRLGISSRLDQVFEAPHAVKEVLIGQFGLDSSYIGSKESDEKADMVLKL 360
                 + ++E+   GI SRLDQ+F+AP AVKEVL  QFGL+ SYIGSK +D+KAD V KL
Sbjct: 518  TNQHFKLSEEVRAFGIYSRLDQIFDAPAAVKEVLTMQFGLEHSYIGSKVTDQKADEVSKL 577

Query: 361  GIMDLWTPENHYRWFKSRYGNHVSGNVEAVDRSRFLFCNLDVKEIETLKSRQIELNETIS 540
            GI+D WTP+NHYRW +SRYG H+SG+VE VDRSR L CNLD  EI+ L+SR+ EL E++S
Sbjct: 578  GILDFWTPDNHYRWSRSRYGGHISGSVEPVDRSRLLLCNLDAGEIDGLRSRKSELEESVS 637

Query: 541  AIEADLKALQFTLRQKEDDAAELRHERDEIVDIIKRQMKKRKEMEQLVNQRRMKLK 708
            A+E + K+ Q  LR  ED+ A+LR  R++I++ ++ + +KR+EME  ++QR+ KL+
Sbjct: 638  ALEENCKSCQNELRLIEDEEAKLRKHREDILNTVQHEKRKRREMENRIDQRKKKLE 693


>ref|XP_004135946.1| PREDICTED: structural maintenance of chromosomes protein 5-like
            [Cucumis sativus]
          Length = 1053

 Score =  286 bits (733), Expect = 2e-75
 Identities = 137/236 (58%), Positives = 181/236 (76%)
 Frame = +1

Query: 1    PVLLEVNVANRLHADYLEGHVSYYIWKSFITQNSDDRDLLVKNLKPFDVPVINHVGNECS 180
            PVLLEVNV+NR HADYLEGH+  Y+WKSFITQ+S DRD++VKNL  F VPV+N+VG E  
Sbjct: 458  PVLLEVNVSNRTHADYLEGHIPSYVWKSFITQDSHDRDIMVKNLGSFGVPVLNYVGGERR 517

Query: 181  HRDALRTTDEMHRLGISSRLDQVFEAPHAVKEVLIGQFGLDSSYIGSKESDEKADMVLKL 360
                   ++E+   GI SRLDQ+F+AP AVKEVL  QFGL+ SYIGSK +D+KAD V KL
Sbjct: 518  TNQHFELSEEVRAFGIYSRLDQIFDAPAAVKEVLTMQFGLEHSYIGSKVTDQKADEVSKL 577

Query: 361  GIMDLWTPENHYRWFKSRYGNHVSGNVEAVDRSRFLFCNLDVKEIETLKSRQIELNETIS 540
            GI+D WTP+NHYRW +SRYG H+SG+VE VDRSR L CNLD  EI+ L+SR+ EL E++S
Sbjct: 578  GILDFWTPDNHYRWSRSRYGGHISGSVEPVDRSRLLLCNLDAGEIDGLRSRKSELEESVS 637

Query: 541  AIEADLKALQFTLRQKEDDAAELRHERDEIVDIIKRQMKKRKEMEQLVNQRRMKLK 708
            A+E + K+ Q  LR  ED+ A+LR  R++I++ ++ + +KR+EME  ++QR+ KL+
Sbjct: 638  ALEENCKSCQNELRLIEDEEAKLRKHREDILNTVQHEKRKRREMENRIDQRKKKLE 693


>ref|NP_197096.1| structural maintenance of chromosomes 5 [Arabidopsis thaliana]
            gi|9755638|emb|CAC01791.1| putative protein [Arabidopsis
            thaliana] gi|332004841|gb|AED92224.1| structural
            maintenance of chromosomes 5 [Arabidopsis thaliana]
          Length = 1053

 Score =  270 bits (689), Expect = 3e-70
 Identities = 133/236 (56%), Positives = 178/236 (75%)
 Frame = +1

Query: 1    PVLLEVNVANRLHADYLEGHVSYYIWKSFITQNSDDRDLLVKNLKPFDVPVINHVGNECS 180
            PVL+EVNV NR +A +LEGHVS+YIWKSFITQ+ +DRDLLVKNLK FDVPV+N+VGN  +
Sbjct: 456  PVLVEVNVPNRENACFLEGHVSFYIWKSFITQDPEDRDLLVKNLKRFDVPVLNYVGNSGN 515

Query: 181  HRDALRTTDEMHRLGISSRLDQVFEAPHAVKEVLIGQFGLDSSYIGSKESDEKADMVLKL 360
             +     +D+M  LGI +RLDQ+F+AP AVKEVL  QFGL+ SYIGSK +D++A+ V KL
Sbjct: 516  QKAPFHISDQMRSLGIHARLDQIFDAPDAVKEVLNSQFGLEDSYIGSKITDQRAEEVYKL 575

Query: 361  GIMDLWTPENHYRWFKSRYGNHVSGNVEAVDRSRFLFCNLDVKEIETLKSRQIELNETIS 540
            GI D WTP+NHYRW  SRYG H S +V++V +SR L C +DV E+E L+SR+ EL ++I 
Sbjct: 576  GIKDFWTPDNHYRWSSSRYGGHSSASVDSVYQSRLLLCGVDVGELEKLRSRKEELEDSIL 635

Query: 541  AIEADLKALQFTLRQKEDDAAELRHERDEIVDIIKRQMKKRKEMEQLVNQRRMKLK 708
             +E   K+LQ   R+ E++AA+L  ER+EIV++   + KKR+E+E    QR+ KL+
Sbjct: 636  FMEETHKSLQTEQRRLEEEAAKLHKEREEIVNVSYLEKKKRRELESRYQQRKTKLE 691


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