BLASTX nr result

ID: Scutellaria24_contig00028288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00028288
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301412.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15
ref|NP_192830.1| RNA polymerase II transcriptional coactivator K...    77   2e-12
emb|CAD10638.1| PBF68 protein [Nicotiana tabacum]                      77   2e-12
ref|XP_003553790.1| PREDICTED: uncharacterized protein LOC100800...    75   4e-12
ref|XP_002874654.1| hypothetical protein ARALYDRAFT_489930 [Arab...    75   4e-12

>ref|XP_002301412.1| predicted protein [Populus trichocarpa] gi|222843138|gb|EEE80685.1|
           predicted protein [Populus trichocarpa]
          Length = 459

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 46/121 (38%), Positives = 73/121 (60%), Gaps = 3/121 (2%)
 Frame = +2

Query: 2   ELNVRSVAAARLGFELSGLNHRRFVRQLVDRFLLSQAADILRTTSLRVIDSSSTG---EN 172
           E  VR+ A  RL F+LS + H++F+R +++ FLLS   +  +  +  V + +      E+
Sbjct: 21  EFKVRATATERLDFDLSHIEHKKFIRGVIESFLLSTMDEEGKEANGNVREDTKEALQEEH 80

Query: 173 AEQLPKQQMSGVGDESAPNYNGRIICKLSDKRRVTVHDVKGTTMVAIRDFYVKDGNMLPE 352
            E L K+++   G+        R+ICKLS++R VT+ + KG + V+IRDFY KDGN+LP 
Sbjct: 81  EEVLTKKEVGTDGN--------RVICKLSERRSVTIQEFKGKSFVSIRDFYQKDGNLLPS 132

Query: 353 K 355
           K
Sbjct: 133 K 133


>ref|NP_192830.1| RNA polymerase II transcriptional coactivator KELP [Arabidopsis
           thaliana] gi|145333013|ref|NP_001078372.1| RNA
           polymerase II transcriptional coactivator KELP
           [Arabidopsis thaliana]
           gi|37079408|sp|O65155.1|KELP_ARATH RecName: Full=RNA
           polymerase II transcriptional coactivator KELP
           gi|2997686|gb|AAC08575.1| putative transcriptional
           co-activator [Arabidopsis thaliana]
           gi|3513735|gb|AAC33951.1| contains similarity to RNA
           polymerase II transcription cofactor p15 [Arabidopsis
           thaliana] gi|4539366|emb|CAB40060.1| putative protein
           [Arabidopsis thaliana] gi|7267790|emb|CAB81193.1|
           putative protein [Arabidopsis thaliana]
           gi|21554027|gb|AAM63108.1| putative transcriptional
           coactivator [Arabidopsis thaliana]
           gi|29028806|gb|AAO64782.1| At4g10920 [Arabidopsis
           thaliana] gi|110736559|dbj|BAF00245.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|110738319|dbj|BAF01087.1| hypothetical protein
           [Arabidopsis thaliana] gi|332657543|gb|AEE82943.1| RNA
           polymerase II transcriptional coactivator KELP
           [Arabidopsis thaliana] gi|332657544|gb|AEE82944.1| RNA
           polymerase II transcriptional coactivator KELP
           [Arabidopsis thaliana]
          Length = 165

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 45/125 (36%), Positives = 69/125 (55%)
 Frame = +2

Query: 2   ELNVRSVAAARLGFELSGLNHRRFVRQLVDRFLLSQAADILRTTSLRVIDSSSTGENAEQ 181
           E  VR +A+ +L  +LS  +H+ FVR +V++FL  + A        R  ++S   +  E 
Sbjct: 27  EFKVRKLASEKLAIDLSEKSHKAFVRSVVEKFLDEERA--------REYENSQVNKEEED 78

Query: 182 LPKQQMSGVGDESAPNYNGRIICKLSDKRRVTVHDVKGTTMVAIRDFYVKDGNMLPEKGP 361
             K    G G++   +    IIC+LSDKRRVT+ + KG ++V+IR++Y KDG  LP    
Sbjct: 79  GDKD--CGKGNKEFDDDGDLIICRLSDKRRVTIQEFKGKSLVSIREYYKKDGKELPTSKG 136

Query: 362 FSRPD 376
            S  D
Sbjct: 137 ISLTD 141


>emb|CAD10638.1| PBF68 protein [Nicotiana tabacum]
          Length = 594

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 47/132 (35%), Positives = 71/132 (53%), Gaps = 16/132 (12%)
 Frame = +2

Query: 2   ELNVRSVAAARLGFELSGLNHRRFVRQLVDRFLLSQAADILRTTSLRVIDSSSTGENAEQ 181
           E +VR+  A +LG E+  +  ++F+R +++ FLLS   +     + R I ++  G N + 
Sbjct: 31  EYSVRTTVAQQLGTEILNIQEKQFIRHVIESFLLSTVENPTLDNNRR-ISTAEKGVNTDF 89

Query: 182 LPKQQMSG--------VGDESAPN--------YNGRIICKLSDKRRVTVHDVKGTTMVAI 313
           + ++Q+S           D S PN         N R ICKLSDKR V + D+ G   VAI
Sbjct: 90  VAEEQLSADHPPTQHQEADGSLPNGNLVDSNENNCRTICKLSDKRSVGILDIHGKPFVAI 149

Query: 314 RDFYVKDGNMLP 349
           RDFY KDG ++P
Sbjct: 150 RDFYEKDGKLVP 161


>ref|XP_003553790.1| PREDICTED: uncharacterized protein LOC100800963 [Glycine max]
          Length = 515

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 42/116 (36%), Positives = 67/116 (57%)
 Frame = +2

Query: 2   ELNVRSVAAARLGFELSGLNHRRFVRQLVDRFLLSQAADILRTTSLRVIDSSSTGENAEQ 181
           E  +R  A+ RLG +LS    R FVR +V+ +LLS AA+ +   + +  +     +N + 
Sbjct: 27  EFTIRVAASERLGIDLSDSPSRHFVRTVVESYLLSVAANEISKDAEKKENEDIAAKNDDD 86

Query: 182 LPKQQMSGVGDESAPNYNGRIICKLSDKRRVTVHDVKGTTMVAIRDFYVKDGNMLP 349
           + K  +  V      +   R+IC+LS +R + V   KGTT+V+IR+FY+KDG +LP
Sbjct: 87  VKKGDVVAVPKLKRDDPE-RVICQLSSRRNLAVKHFKGTTLVSIREFYMKDGKLLP 141


>ref|XP_002874654.1| hypothetical protein ARALYDRAFT_489930 [Arabidopsis lyrata subsp.
           lyrata] gi|297320491|gb|EFH50913.1| hypothetical protein
           ARALYDRAFT_489930 [Arabidopsis lyrata subsp. lyrata]
          Length = 165

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 45/125 (36%), Positives = 67/125 (53%)
 Frame = +2

Query: 2   ELNVRSVAAARLGFELSGLNHRRFVRQLVDRFLLSQAADILRTTSLRVIDSSSTGENAEQ 181
           E  VR +A+  LG +LS  +H+ FVR +V++FL  +          R  D   +  N E+
Sbjct: 27  EFKVRQLASEGLGIDLSEKSHKAFVRSVVEKFLHEE----------RARDYEKSQVNKEE 76

Query: 182 LPKQQMSGVGDESAPNYNGRIICKLSDKRRVTVHDVKGTTMVAIRDFYVKDGNMLPEKGP 361
               +  G G++   +    II +LSDKRRVT+ + KG T+V+IR++Y KDG  LP    
Sbjct: 77  EDGDKDCGKGNKEFDDDGDLIIWRLSDKRRVTIQEFKGKTLVSIREYYKKDGKELPTSKG 136

Query: 362 FSRPD 376
            S  D
Sbjct: 137 ISLTD 141


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