BLASTX nr result
ID: Scutellaria24_contig00028138
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria24_contig00028138
(296 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002316529.1| predicted protein [Populus trichocarpa] gi|2... 122 2e-26
ref|XP_002889890.1| pentatricopeptide repeat-containing protein ... 111 7e-23
ref|NP_172636.1| pentatricopeptide repeat-containing protein [Ar... 108 5e-22
ref|XP_002518478.1| pentatricopeptide repeat-containing protein,... 105 4e-21
gb|ADN34051.1| pentatricopeptide repeat-containing protein [Cucu... 102 3e-20
>ref|XP_002316529.1| predicted protein [Populus trichocarpa] gi|222859594|gb|EEE97141.1|
predicted protein [Populus trichocarpa]
Length = 678
Score = 122 bits (307), Expect = 2e-26
Identities = 56/96 (58%), Positives = 76/96 (79%)
Frame = -2
Query: 289 EALSVFYRMLKGGILPNIIGFNMLIDGACRADELDLASKLVMKMETMSRGNASPNAVTYN 110
EALSVFYR+LK GI PN++ FNM++DGAC+ ++DLA KLV KME MS G+ PN+VTYN
Sbjct: 256 EALSVFYRILKSGIWPNVVTFNMMVDGACKMGDMDLALKLVRKMEIMSAGSIKPNSVTYN 315
Query: 109 CLINGYCKKGTPELAEEILDRMIEMGVKPNTRTYAT 2
LI+G+CK G +AEE+ + M+++ ++PN RTYAT
Sbjct: 316 SLIDGFCKIGGITVAEELRNEMMKIDIEPNVRTYAT 351
Score = 62.0 bits (149), Expect = 5e-08
Identities = 33/95 (34%), Positives = 53/95 (55%)
Frame = -2
Query: 286 ALSVFYRMLKGGILPNIIGFNMLIDGACRADELDLASKLVMKMETMSRGNASPNAVTYNC 107
A + RM G++P+++ F LIDG C+ ++ A V + M +G PN + YN
Sbjct: 470 ARQLLARMYVRGLVPDVVTFGTLIDGHCKEGNIESA---VQVYDKMVKGEEKPNLLVYNS 526
Query: 106 LINGYCKKGTPELAEEILDRMIEMGVKPNTRTYAT 2
+ING CK G ++A ++D + MG+ +T TY T
Sbjct: 527 IINGLCKDGLVDVARSLVDVLQRMGL-VDTITYNT 560
>ref|XP_002889890.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297335732|gb|EFH66149.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 657
Score = 111 bits (277), Expect = 7e-23
Identities = 54/94 (57%), Positives = 68/94 (72%)
Frame = -2
Query: 289 EALSVFYRMLKGGILPNIIGFNMLIDGACRADELDLASKLVMKMETMSRGNASPNAVTYN 110
EALSVFYRMLK GI PN++ FNM+IDGAC+ ++ A +L+ KM MS SPNAVTYN
Sbjct: 236 EALSVFYRMLKCGIWPNVVSFNMMIDGACKTGDMRFALQLLGKMGVMSGNFVSPNAVTYN 295
Query: 109 CLINGYCKKGTPELAEEILDRMIEMGVKPNTRTY 8
+ING+CK G +LAE I M+++GV N RTY
Sbjct: 296 SVINGFCKAGRLDLAERIRGEMVKLGVDCNERTY 329
Score = 56.6 bits (135), Expect = 2e-06
Identities = 29/78 (37%), Positives = 47/78 (60%)
Frame = -2
Query: 235 IGFNMLIDGACRADELDLASKLVMKMETMSRGNASPNAVTYNCLINGYCKKGTPELAEEI 56
+ +N L++G+ + ++ A ++ +M+ G S + VTYN LIN CK G E A+E+
Sbjct: 533 VTYNTLLNGSLKIGNVEEADNILSRMQKQD-GEKSVSLVTYNILINHLCKFGCYEKAKEV 591
Query: 55 LDRMIEMGVKPNTRTYAT 2
L M+E GV P++ TY T
Sbjct: 592 LKIMVERGVVPDSITYGT 609
>ref|NP_172636.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200496|sp|Q9SAA6.1|PPR34_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g11710, mitochondrial; Flags: Precursor
gi|4835786|gb|AAD30252.1|AC007296_13 F25C20.14
[Arabidopsis thaliana] gi|22655109|gb|AAM98145.1|
putative salt-inducible protein [Arabidopsis thaliana]
gi|30725498|gb|AAP37771.1| At1g11710 [Arabidopsis
thaliana] gi|332190652|gb|AEE28773.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 108 bits (270), Expect = 5e-22
Identities = 53/94 (56%), Positives = 67/94 (71%)
Frame = -2
Query: 289 EALSVFYRMLKGGILPNIIGFNMLIDGACRADELDLASKLVMKMETMSRGNASPNAVTYN 110
EALSVFYRMLK G+ PN++ FNM+IDGAC+ ++ A +L+ KM MS SPNAVTYN
Sbjct: 236 EALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYN 295
Query: 109 CLINGYCKKGTPELAEEILDRMIEMGVKPNTRTY 8
+ING+CK G +LAE I M++ GV N RTY
Sbjct: 296 SVINGFCKAGRLDLAERIRGDMVKSGVDCNERTY 329
Score = 55.5 bits (132), Expect = 5e-06
Identities = 28/82 (34%), Positives = 50/82 (60%)
Frame = -2
Query: 247 LPNIIGFNMLIDGACRADELDLASKLVMKMETMSRGNASPNAVTYNCLINGYCKKGTPEL 68
+ +I+ +N L++ + + ++ A ++ KM+ G S + VT+N +IN CK G+ E
Sbjct: 529 IKDIVTYNTLLNESLKTGNVEEADDILSKMQKQD-GEKSVSLVTFNIMINHLCKFGSYEK 587
Query: 67 AEEILDRMIEMGVKPNTRTYAT 2
A+E+L M+E GV P++ TY T
Sbjct: 588 AKEVLKFMVERGVVPDSITYGT 609
>ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542323|gb|EEF43865.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 606
Score = 105 bits (262), Expect = 4e-21
Identities = 51/96 (53%), Positives = 66/96 (68%)
Frame = -2
Query: 289 EALSVFYRMLKGGILPNIIGFNMLIDGACRADELDLASKLVMKMETMSRGNASPNAVTYN 110
EA+SV YR LK GI PN++ FNM+IDGA + +DLA KLV KME MS + P++VTYN
Sbjct: 181 EAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYN 240
Query: 109 CLINGYCKKGTPELAEEILDRMIEMGVKPNTRTYAT 2
+NG+CK G +AEE M+ ++PN RTYAT
Sbjct: 241 SFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYAT 276
Score = 58.9 bits (141), Expect = 4e-07
Identities = 37/96 (38%), Positives = 56/96 (58%)
Frame = -2
Query: 289 EALSVFYRMLKGGILPNIIGFNMLIDGACRADELDLASKLVMKMETMSRGNASPNAVTYN 110
+A ++F M GIL + + +N LI+ C+A + L +K +MKM + RG P+ VTY
Sbjct: 498 QAFALFSEMRNSGILASHVTYNTLINSLCKAGHV-LQAKELMKMMVL-RG-LIPDYVTYT 554
Query: 109 CLINGYCKKGTPELAEEILDRMIEMGVKPNTRTYAT 2
LI + KK +PE E+ D M+ GV P+ +TY T
Sbjct: 555 ILITSFSKKCSPEEVIELHDYMVLKGVVPDRQTYQT 590
>gb|ADN34051.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 653
Score = 102 bits (254), Expect = 3e-20
Identities = 50/95 (52%), Positives = 65/95 (68%)
Frame = -2
Query: 289 EALSVFYRMLKGGILPNIIGFNMLIDGACRADELDLASKLVMKMETMSRGNASPNAVTYN 110
EA+SV Y MLK I PN++ FNM+ID A + E+DLA KL E +S G+ SPN VTYN
Sbjct: 232 EAISVVYLMLKIEIWPNVVSFNMIIDKASKMGEMDLALKLTRNTEVISGGSVSPNIVTYN 291
Query: 109 CLINGYCKKGTPELAEEILDRMIEMGVKPNTRTYA 5
C+ING+CK E A+ +L MI++G+ N RTYA
Sbjct: 292 CIINGFCKIRRLESAKNVLAEMIKLGIDSNERTYA 326