BLASTX nr result

ID: Scutellaria24_contig00028135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00028135
         (603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containi...   213   2e-53
ref|XP_002528578.1| pentatricopeptide repeat-containing protein,...   205   6e-51
ref|XP_002316451.1| predicted protein [Populus trichocarpa] gi|2...   204   1e-50
ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containi...   184   1e-44
ref|NP_196771.1| pentatricopeptide repeat-containing protein [Ar...   172   5e-41

>ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
            mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  213 bits (543), Expect = 2e-53
 Identities = 102/196 (52%), Positives = 140/196 (71%)
 Frame = -3

Query: 601  GLCKMGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRPDLVEKIIEEMSQMDLTPD 422
            G    GN++K L+LY+ M  +GIKPTLNT+H LI+   K+   LVEKI +EM QM+L PD
Sbjct: 611  GYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQMNLVPD 670

Query: 421  RVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLFD 242
            RV+YN LI C+V H ++QKA  L++ M  +GI PDKMTYN LI G  K G +   ++L +
Sbjct: 671  RVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVN 730

Query: 241  EMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLREEG 62
            +M ++GL P   T++ LI  HCKLKD DGAY+WY+EM + GF P VS+C+ L++GLREEG
Sbjct: 731  DMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEG 790

Query: 61   RFEEAETISSEISVKG 14
            R  +A+ I SE+++KG
Sbjct: 791  RSHDADVICSEMNMKG 806



 Score = 98.6 bits (244), Expect = 7e-19
 Identities = 57/199 (28%), Positives = 105/199 (52%), Gaps = 1/199 (0%)
 Frame = -3

Query: 601 GLCKMGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIF-EKDRPDLVEKIIEEMSQMDLTP 425
           G C++G++ K     +KM   G++P   T++SL+  F E    +  EK I++M +  + P
Sbjct: 401 GYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLP 460

Query: 424 DRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLF 245
           +   YN LI  +       +   +  +M  KG+ P+ ++Y  LI    K  N+  A  + 
Sbjct: 461 NVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVIL 520

Query: 244 DEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLREE 65
            +M+ +G+ PN   +N LI+  C    +  A+ ++ EM+     P +   N L++GL ++
Sbjct: 521 GDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKK 580

Query: 64  GRFEEAETISSEISVKGVN 8
           G+  EAE ++SEI+ KG++
Sbjct: 581 GKVMEAENLASEITRKGLS 599



 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 55/198 (27%), Positives = 99/198 (50%), Gaps = 1/198 (0%)
 Frame = -3

Query: 601 GLCKMGNLEKCLDLYKKMNTAGIKPTLNTFHSLIS-IFEKDRPDLVEKIIEEMSQMDLTP 425
           G CK+G LE+  ++ ++M    ++PT+ TF+SL++ +      +  ++++EEM      P
Sbjct: 261 GYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVP 320

Query: 424 DRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLF 245
           DR  Y  L    +   N+  +  L  + + KG+     T + L+    K GN++ A ++ 
Sbjct: 321 DRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVL 380

Query: 244 DEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLREE 65
            + +  GL+P    FNT++  +C++ DI+ AY   ++M   G  P     N L+    E 
Sbjct: 381 KKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEM 440

Query: 64  GRFEEAETISSEISVKGV 11
              EEAE    ++  KGV
Sbjct: 441 KNMEEAEKCIKKMVEKGV 458



 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 60/196 (30%), Positives = 96/196 (48%), Gaps = 1/196 (0%)
 Frame = -3

Query: 595  CKMGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRP-DLVEKIIEEMSQMDLTPDR 419
            C+M N+E+     KKM   G+ P + T+++LI  + +    D   +I+EEM +  L P+ 
Sbjct: 438  CEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNV 497

Query: 418  VVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLFDE 239
            + Y  LI C     NI +A  +  DM+++G+ P+   YN LI G    G L+ A   FDE
Sbjct: 498  ISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDE 557

Query: 238  MIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLREEGR 59
            M+ + + P   T+N LI   CK   +  A     E+ + G    V   N L+SG    G 
Sbjct: 558  MVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGN 617

Query: 58   FEEAETISSEISVKGV 11
             ++A  +   +   G+
Sbjct: 618  VQKALELYETMKKSGI 633



 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 55/185 (29%), Positives = 96/185 (51%), Gaps = 1/185 (0%)
 Frame = -3

Query: 565 DLYKKMNTAGIKPTLNTFHSLI-SIFEKDRPDLVEKIIEEMSQMDLTPDRVVYNELIQCF 389
           +LY  M   G+ P++ + +  + S+    R +   ++  E+ +  L PD+ +Y + IQ  
Sbjct: 133 ELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAA 192

Query: 388 VCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLFDEMIVKGLSPND 209
           V   ++++A  L T M   G+ P    YN +I G  K   ++ A  LFDEM+ + ++PN 
Sbjct: 193 VKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNR 252

Query: 208 GTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLREEGRFEEAETISSE 29
            T+NTLI+ +CK+  ++ A+   + M      P +   N LL+GL      EEA+ +  E
Sbjct: 253 ITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEE 312

Query: 28  ISVKG 14
           + V G
Sbjct: 313 MEVYG 317



 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 51/195 (26%), Positives = 102/195 (52%), Gaps = 1/195 (0%)
 Frame = -3

Query: 592 KMGNLEKCLDLYKKMNTAGIKPTLNTFHSLIS-IFEKDRPDLVEKIIEEMSQMDLTPDRV 416
           K+G+L++ ++L   M   G+ P +  ++ +I  + ++ R    EK+ +EM    + P+R+
Sbjct: 194 KLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRI 253

Query: 415 VYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLFDEM 236
            YN LI  +     +++A  +   M  + + P  +T+NSL+ G  +   ++ A+ + +EM
Sbjct: 254 TYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEM 313

Query: 235 IVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLREEGRF 56
            V G  P+  T+ TL + H K  ++D +    +E ++ G       C+ LL+ L +EG  
Sbjct: 314 EVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNM 373

Query: 55  EEAETISSEISVKGV 11
           E+AE +  +    G+
Sbjct: 374 EKAEEVLKKFLENGL 388



 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 51/173 (29%), Positives = 91/173 (52%), Gaps = 1/173 (0%)
 Frame = -3

Query: 577 EKCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRPDL-VEKIIEEMSQMDLTPDRVVYNEL 401
           ++C  + ++M   G+KP + ++  LI+   KD   L  E I+ +M    + P+  +YN L
Sbjct: 479 DRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNML 538

Query: 400 IQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLFDEMIVKGL 221
           I        ++ A   + +M+ + I P  +TYN LI G  K G +  A +L  E+  KGL
Sbjct: 539 IDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGL 598

Query: 220 SPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLREEG 62
           S +  T+N+LI  +    ++  A   Y+ M K+G  P ++  ++L++G  +EG
Sbjct: 599 SFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEG 651



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 53/198 (26%), Positives = 98/198 (49%), Gaps = 1/198 (0%)
 Frame = -3

Query: 601 GLCKMGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKD-RPDLVEKIIEEMSQMDLTP 425
           G  K GN++  + L ++    G++    T   L++   K+   +  E+++++  +  L P
Sbjct: 331 GHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAP 390

Query: 424 DRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLF 245
             V +N ++  +    +I KA      M   G+ P+ +TYNSL+    +M N++ A    
Sbjct: 391 VGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCI 450

Query: 244 DEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLREE 65
            +M+ KG+ PN  T+NTLI+ + +    D  +   +EM K G  P V     L++ L ++
Sbjct: 451 KKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKD 510

Query: 64  GRFEEAETISSEISVKGV 11
               EAE I  ++  +GV
Sbjct: 511 ANILEAEVILGDMVHRGV 528


>ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223531974|gb|EEF33786.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 817

 Score =  205 bits (521), Expect = 6e-51
 Identities = 98/197 (49%), Positives = 132/197 (67%)
 Frame = -3

Query: 601  GLCKMGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRPDLVEKIIEEMSQMDLTPD 422
            G    GN+ KCL LY+ M   GIKPT+ T+H LIS   K+  +LVEK+  EM QM+L PD
Sbjct: 605  GYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIELVEKLYNEMLQMNLLPD 664

Query: 421  RVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLFD 242
            RVVYN +I C+    N QKA  L+  ML++GI PDKMTYNSLI G  + G L   +DL +
Sbjct: 665  RVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVN 724

Query: 241  EMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLREEG 62
             M  K L+P   T++ L++ HC LKD  GAY+WY+EM++  F P  S+CN+L +GL +EG
Sbjct: 725  NMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEG 784

Query: 61   RFEEAETISSEISVKGV 11
            R +E + I SE++VKG+
Sbjct: 785  RLQEVQVICSEMNVKGI 801



 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 55/197 (27%), Positives = 103/197 (52%), Gaps = 1/197 (0%)
 Frame = -3

Query: 601 GLCKMGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIF-EKDRPDLVEKIIEEMSQMDLTP 425
           G C++G++ K +   ++M + G++P   TF+SLI  F +    D  E+ +++M++  +TP
Sbjct: 395 GYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTP 454

Query: 424 DRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLF 245
               YN LI  +       +   +   M   G+ P+ ++Y SLI    K G +  A  + 
Sbjct: 455 SVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVL 514

Query: 244 DEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLREE 65
            +MI +G+ PN   +N LI+  C +  +  A  ++ EM+++   P +   N L+ GL ++
Sbjct: 515 RDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKK 574

Query: 64  GRFEEAETISSEISVKG 14
           G+  EAE   ++I+  G
Sbjct: 575 GKLTEAEDFLTQITSSG 591



 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 56/179 (31%), Positives = 92/179 (51%), Gaps = 1/179 (0%)
 Frame = -3

Query: 595 CKMGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRP-DLVEKIIEEMSQMDLTPDR 419
           C M  ++K  +  KKM   G+ P++ T+++LI  + K    D   +I+E+M ++ + P+ 
Sbjct: 432 CDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNV 491

Query: 418 VVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLFDE 239
           V Y  LI C      I +A  +  DM+ +G+ P+   YN LI G   +G ++ A   FDE
Sbjct: 492 VSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDE 551

Query: 238 MIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLREEG 62
           M+   +SP   T+N LI+  CK   +  A  +  ++  +G  P V   N L+SG    G
Sbjct: 552 MMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAG 610



 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 1/195 (0%)
 Frame = -3

Query: 595 CKMGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRPDL-VEKIIEEMSQMDLTPDR 419
           CK   L + ++LY+ M   G  P+L +   L S    ++  + V  +  E+       D 
Sbjct: 117 CKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSGFRTDT 176

Query: 418 VVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLFDE 239
            +Y + IQ  V   N++        M  +G+ P+   YN LI G  +   ++ A  +FDE
Sbjct: 177 FMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDE 236

Query: 238 MIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLREEGR 59
           M    L  +  T+NTLI+ +CK+ ++D A+   + M +    P +   N LLSGL +  +
Sbjct: 237 MCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRK 296

Query: 58  FEEAETISSEISVKG 14
            +EA ++  E+ V G
Sbjct: 297 MKEARSLLKEMEVNG 311



 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 1/193 (0%)
 Frame = -3

Query: 601  GLCKMGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRPDL-VEKIIEEMSQMDLTP 425
            G  K+   ++C  + ++M   G+KP + ++ SLI+   KD   L  E ++ +M    + P
Sbjct: 465  GYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLP 524

Query: 424  DRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLF 245
            +  VYN LI        ++ A   + +M+   I P  +TYN LI G  K G L  A D  
Sbjct: 525  NAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFL 584

Query: 244  DEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLREE 65
             ++   G SP+  T+N+LI  +    ++      Y+ M   G  P V   + L+SG  +E
Sbjct: 585  TQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKE 644

Query: 64   GRFEEAETISSEI 26
            G  E  E + +E+
Sbjct: 645  G-IELVEKLYNEM 656



 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 51/198 (25%), Positives = 103/198 (52%), Gaps = 1/198 (0%)
 Frame = -3

Query: 601 GLCKMGNLEKCLDLYKKMNTAGIKPTLNTFHSLIS-IFEKDRPDLVEKIIEEMSQMDLTP 425
           GL +  +    ++LY++    GI+    T   L++ + ++ + +  E+I+++ ++  L  
Sbjct: 325 GLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVA 384

Query: 424 DRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLF 245
           D V+YN  +  +    ++ KA      M + G+ P+ +T+NSLI     M  +  A +  
Sbjct: 385 DEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWV 444

Query: 244 DEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLREE 65
            +M  KG++P+  T+NTLI+ + KL   D  +   ++M + G  P V     L++ L ++
Sbjct: 445 KKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKD 504

Query: 64  GRFEEAETISSEISVKGV 11
           G+  EAE +  ++  +GV
Sbjct: 505 GKILEAEIVLRDMICRGV 522



 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 1/201 (0%)
 Frame = -3

Query: 601 GLCKMGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRP-DLVEKIIEEMSQMDLTP 425
           G CK+G L+    + ++M    + P + TF+SL+S   K R       +++EM      P
Sbjct: 255 GYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMP 314

Query: 424 DRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLF 245
           D   Y+ L    +  D+   A  LY     KGI  +  T + L+ G  K G ++ A ++ 
Sbjct: 315 DGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEIL 374

Query: 244 DEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLREE 65
            +    GL  ++  +NT +  +C++ D++ A +  + M   G  P     N L+    + 
Sbjct: 375 KKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDM 434

Query: 64  GRFEEAETISSEISVKGVNKS 2
              ++AE    +++ KGV  S
Sbjct: 435 KEMDKAEEWVKKMAEKGVTPS 455



 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 1/189 (0%)
 Frame = -3

Query: 574 KCLDLYKKMNTAGIKPTLNTFHSLISIFEK-DRPDLVEKIIEEMSQMDLTPDRVVYNELI 398
           K +DL+ ++  +G +     +   I    K     +  + ++ M +  + P+  +YN LI
Sbjct: 159 KVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLI 218

Query: 397 QCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLFDEMIVKGLS 218
                   I+ A  ++ +M N  +    +TYN+LI G  K+G L  A  + + M  K ++
Sbjct: 219 GGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVA 278

Query: 217 PNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLREEGRFEEAETI 38
           PN  TFN+L+   CK++ +  A    KEM   GF P     + L  GL        A  +
Sbjct: 279 PNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMEL 338

Query: 37  SSEISVKGV 11
             + + KG+
Sbjct: 339 YEQATEKGI 347


>ref|XP_002316451.1| predicted protein [Populus trichocarpa] gi|222865491|gb|EEF02622.1|
            predicted protein [Populus trichocarpa]
          Length = 707

 Score =  204 bits (519), Expect = 1e-50
 Identities = 98/198 (49%), Positives = 135/198 (68%)
 Frame = -3

Query: 601  GLCKMGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRPDLVEKIIEEMSQMDLTPD 422
            G    GN +KCL+LY+ M   G+KPT+NTFH LIS   K+   L E +  EM QM+L+PD
Sbjct: 496  GYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETLFNEMLQMNLSPD 555

Query: 421  RVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLFD 242
            RVVYN +I C+    ++QKA  L  +M++ G+ PD  TYNSLI G LK G L   +DL D
Sbjct: 556  RVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVD 615

Query: 241  EMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLREEG 62
            +M  KGL P   T++ LI+ HC LKD +GAY+WY+EML+ GF P V +CN+L +GLR++G
Sbjct: 616  DMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDG 675

Query: 61   RFEEAETISSEISVKGVN 8
            R +EA++I SE+   G++
Sbjct: 676  RLQEAQSICSEMIANGMD 693



 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 1/185 (0%)
 Frame = -3

Query: 565 DLYKKMNTAGIKPTLNTFHSLI-SIFEKDRPDLVEKIIEEMSQMDLTPDRVVYNELIQCF 389
           +LY  M   G  P+      ++ S+ E  + D V  + +EM  +   PD++VY   +   
Sbjct: 17  ELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAA 76

Query: 388 VCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLFDEMIVKGLSPND 209
           V   +++ A  L+  M  + + P+   YN LI G  K   ++ A  LF EM V+ L PN 
Sbjct: 77  VKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNR 136

Query: 208 GTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLREEGRFEEAETISSE 29
            TFNTLI+ +CK  ++D A    + M K    P +   N LLSGL +  R EEA  + +E
Sbjct: 137 VTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNE 196

Query: 28  ISVKG 14
           I   G
Sbjct: 197 IKCNG 201



 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 6/188 (3%)
 Frame = -3

Query: 595 CKMGNLEKCLDLYKKMNTAGIKPTLNTFHSLIS------IFEKDRPDLVEKIIEEMSQMD 434
           C+M  ++K  +  KKM   GI P++ T++ LI       +F +       +I+EEM +  
Sbjct: 323 CEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSR-----CFQILEEMEENG 377

Query: 433 LTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGAR 254
             P+ + Y  LI C      I +A  +  DM+ +G+ P+   YN LI G   +G L+ A 
Sbjct: 378 EKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREAL 437

Query: 253 DLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGL 74
             FDEM   G+     T+N+LI+  CK+  +  A   +  +  TG  P V   N L+SG 
Sbjct: 438 RFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGY 497

Query: 73  REEGRFEE 50
              G  ++
Sbjct: 498 SNAGNSQK 505



 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 55/196 (28%), Positives = 102/196 (52%), Gaps = 2/196 (1%)
 Frame = -3

Query: 592 KMGNLEKCLDLYKKMNTAGIKPTLNTFHSLIS-IFEKDRPDLVEKIIEEMSQMDLTPDRV 416
           K+G+L+  ++L++ M    + P +  ++ LI  + ++ R    EK+  EMS  +L P+RV
Sbjct: 78  KLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRV 137

Query: 415 VYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLFDEM 236
            +N LI  +     +  A  L   M  + + P  +T+NSL++G  K   ++ AR + +E+
Sbjct: 138 TFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEI 197

Query: 235 IVKGLSPNDGTFNTLIEWHCKLKDIDGAYM-WYKEMLKTGFWPCVSVCNKLLSGLREEGR 59
              G  P+  T++ + +   K  D  GA +  Y+E +  G       C+ LL+GL +EG+
Sbjct: 198 KCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGK 257

Query: 58  FEEAETISSEISVKGV 11
            E+AE +   +   G+
Sbjct: 258 VEKAEEVLKSLVEHGL 273



 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 60/201 (29%), Positives = 94/201 (46%), Gaps = 4/201 (1%)
 Frame = -3

Query: 601 GLCKMGNLEKCLDLYKKMNTAGIKPTLNTFHSLIS----IFEKDRPDLVEKIIEEMSQMD 434
           GLCK G +EK  ++ K +   G+ P    ++++++    I + DR  L    IE+M    
Sbjct: 251 GLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILT---IEQMESRG 307

Query: 433 LTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGAR 254
           L P+ + +N +I  F     I KA      M+ KGI P   TYN LI G  ++       
Sbjct: 308 LRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCF 367

Query: 253 DLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGL 74
            + +EM   G  PN  ++ +LI   CK   I  A M  ++M+  G  P  ++ N L+ G 
Sbjct: 368 QILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGS 427

Query: 73  REEGRFEEAETISSEISVKGV 11
              G+  EA     E+S  G+
Sbjct: 428 CTVGKLREALRFFDEMSKNGI 448



 Score = 81.6 bits (200), Expect = 9e-14
 Identities = 49/202 (24%), Positives = 100/202 (49%), Gaps = 2/202 (0%)
 Frame = -3

Query: 601 GLCKMGNLEKCLDLYKKMNTAGIKPTLNTFHSLIS-IFEKDRPDLVEKIIEEMSQMDLTP 425
           G CK G ++  + L ++M    ++P++ TF+SL+S + +  R +    ++ E+      P
Sbjct: 145 GYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVP 204

Query: 424 DRVVYNELIQCFVCHDNIQKASF-LYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDL 248
           D   Y+ +    +  D+   A+  LY + + KG+  D  T + L+ G  K G ++ A ++
Sbjct: 205 DGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEV 264

Query: 247 FDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLRE 68
              ++  GL P +  +NT++  +C++ D+D A +  ++M   G  P     N ++    E
Sbjct: 265 LKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCE 324

Query: 67  EGRFEEAETISSEISVKGVNKS 2
               ++AE    ++  KG+  S
Sbjct: 325 MQMIDKAEEWVKKMVGKGIAPS 346



 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 54/184 (29%), Positives = 93/184 (50%), Gaps = 1/184 (0%)
 Frame = -3

Query: 574 KCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRPDL-VEKIIEEMSQMDLTPDRVVYNELI 398
           +C  + ++M   G KP + ++ SLI+   KD   L  E ++ +M    + P+  +YN LI
Sbjct: 365 RCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLI 424

Query: 397 QCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLFDEMIVKGLS 218
                   +++A   + +M   GI    +TYNSLI G  KMG L+ A ++F  +   G  
Sbjct: 425 DGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHC 484

Query: 217 PNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLREEGRFEEAETI 38
           P+  T+N+LI  +    +       Y+ M K G  P ++  + L+SG  +EG  +  ET+
Sbjct: 485 PDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEG-IKLKETL 543

Query: 37  SSEI 26
            +E+
Sbjct: 544 FNEM 547



 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 45/187 (24%), Positives = 99/187 (52%), Gaps = 1/187 (0%)
 Frame = -3

Query: 568 LDLYKKMNTAGIKPTLNTFHSLIS-IFEKDRPDLVEKIIEEMSQMDLTPDRVVYNELIQC 392
           LDLY++    G+K    T   L++ + ++ + +  E++++ + +  L P  V+YN ++  
Sbjct: 227 LDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNG 286

Query: 391 FVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLFDEMIVKGLSPN 212
           +    ++ +A      M ++G+ P+ + +NS+I    +M  +  A +   +M+ KG++P+
Sbjct: 287 YCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPS 346

Query: 211 DGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLREEGRFEEAETISS 32
             T+N LI+ + +L      +   +EM + G  P V     L++ L ++G+  EAE +  
Sbjct: 347 VETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLR 406

Query: 31  EISVKGV 11
           ++  +GV
Sbjct: 407 DMVGRGV 413



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 2/199 (1%)
 Frame = -3

Query: 601 GLCKMGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEK-DRPDLVEKIIEEMSQMDLTP 425
           GLCK   +     L+ +M+   + P   TF++LI  + K    D+   + E M +  + P
Sbjct: 110 GLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEP 169

Query: 424 DRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGAR-DL 248
             + +N L+        I++A  +  ++   G  PD  TY+ +  G LK  +  GA  DL
Sbjct: 170 SIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDL 229

Query: 247 FDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLRE 68
           + E I KG+  ++ T + L+   CK   ++ A    K +++ G  P   + N +++G  +
Sbjct: 230 YREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQ 289

Query: 67  EGRFEEAETISSEISVKGV 11
            G  + A     ++  +G+
Sbjct: 290 IGDMDRAILTIEQMESRGL 308


>ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
            mitochondrial-like [Glycine max]
          Length = 777

 Score =  184 bits (466), Expect = 1e-44
 Identities = 92/198 (46%), Positives = 128/198 (64%)
 Frame = -3

Query: 601  GLCKMGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRPDLVEKIIEEMSQMDLTPD 422
            G  K  N +KCL+LY KM   GIKPT+ TFH LI    K+    ++K+ +EM QMDL PD
Sbjct: 579  GYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDKMFQEMLQMDLVPD 638

Query: 421  RVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLFD 242
            + VYNE+I  +    N+ KA  L+  M+++G+  DK+TYNSLI   L+   +   + L D
Sbjct: 639  QFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVD 698

Query: 241  EMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLREEG 62
            +M  KGL P   T+N LI+  C LKD +GAY WY+EM++ G    VS+C +L+SGLREEG
Sbjct: 699  DMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEG 758

Query: 61   RFEEAETISSEISVKGVN 8
               EA+ +SSE+S+ G+N
Sbjct: 759  MLREAQIVSSELSIGGLN 776



 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 62/235 (26%), Positives = 112/235 (47%), Gaps = 37/235 (15%)
 Frame = -3

Query: 601  GLCKMGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRPDLVEKII--EEMSQMDLT 428
            GLC++G +EK  ++  K+   G+ P+  +++ L++ + ++  D+ + I+  E+M +  L 
Sbjct: 334  GLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEG-DVKKAILTTEQMEERGLE 392

Query: 427  PDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDL 248
            P+R+ +N +I  F     +  A      M+ KG+ P   TYNSLI G  + G+     + 
Sbjct: 393  PNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEF 452

Query: 247  FDEM-----------------------------------IVKGLSPNDGTFNTLIEWHCK 173
             DEM                                   I +G+SPN   +N LIE  C 
Sbjct: 453  LDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCS 512

Query: 172  LKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLREEGRFEEAETISSEISVKGVN 8
            L  +  A+ ++ EM+++G    +   N L++GL   GR ++AE +  +++ KG N
Sbjct: 513  LSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCN 567



 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 60/198 (30%), Positives = 97/198 (48%), Gaps = 3/198 (1%)
 Frame = -3

Query: 598 LCKMGN-LEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRP-DLVEKIIEEMSQMDLTP 425
           LC +   L++  DLY  M   G  P+  + + L+      R  +    +  ++      P
Sbjct: 96  LCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRP 155

Query: 424 DRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLF 245
           D V Y + +Q  V   ++ K   L   M+  G+ P    YN ++ G  K+  ++ AR LF
Sbjct: 156 DAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLF 215

Query: 244 DEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVC-NKLLSGLRE 68
           DEMI + + PN  T+NTLI+ +CK+  I+ A + +KE +K     C  V  N LL+GL  
Sbjct: 216 DEMIQRNMVPNTVTYNTLIDGYCKVGGIEEA-LGFKERMKEQNVECNLVTYNSLLNGLCG 274

Query: 67  EGRFEEAETISSEISVKG 14
            GR ++A  +  E+   G
Sbjct: 275 SGRVDDAREVLLEMEGSG 292



 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 55/181 (30%), Positives = 95/181 (52%), Gaps = 1/181 (0%)
 Frame = -3

Query: 601 GLCKMGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRPDL-VEKIIEEMSQMDLTP 425
           G  + G+  +C +   +M+ AGIKP + ++ SLI+   KDR  +  E ++ +M    ++P
Sbjct: 439 GYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSP 498

Query: 424 DRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLF 245
           +  +YN LI+       ++ A   + +M+  GI    +TYN+LI G  + G ++ A DLF
Sbjct: 499 NAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLF 558

Query: 244 DEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLREE 65
            +M  KG +P+  T+N+LI  + K  +       Y +M   G  P V   + L+   R+E
Sbjct: 559 LQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKE 618

Query: 64  G 62
           G
Sbjct: 619 G 619



 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 29/226 (12%)
 Frame = -3

Query: 601 GLCKMGNLEKCLDLYKKMNTAGIKPTLNTFHSLIS-IFEKDRPDLVEKIIEEMSQMDLTP 425
           G CK+G +E+ L   ++M    ++  L T++SL++ +    R D   +++ EM      P
Sbjct: 236 GYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLP 295

Query: 424 ----------------------------DRVVYNELIQCFVCHDNIQKASFLYTDMLNKG 329
                                       D   Y  L+        I+KA  +   ++  G
Sbjct: 296 GGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENG 355

Query: 328 IPPDKMTYNSLITGQLKMGNLQGARDLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAY 149
           + P K++YN L+    + G+++ A    ++M  +GL PN  TFNT+I   C+  ++D A 
Sbjct: 356 VTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAE 415

Query: 148 MWYKEMLKTGFWPCVSVCNKLLSGLREEGRFEEAETISSEISVKGV 11
            W + M++ G  P V   N L++G  ++G F        E+   G+
Sbjct: 416 TWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGI 461


>ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At5g12100, mitochondrial; Flags: Precursor
            gi|9759377|dbj|BAB10028.1| unnamed protein product
            [Arabidopsis thaliana] gi|28973713|gb|AAO64173.1| unknown
            protein [Arabidopsis thaliana] gi|29824237|gb|AAP04079.1|
            unknown protein [Arabidopsis thaliana]
            gi|110737169|dbj|BAF00534.1| hypothetical protein
            [Arabidopsis thaliana] gi|332004380|gb|AED91763.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 816

 Score =  172 bits (435), Expect = 5e-41
 Identities = 85/188 (45%), Positives = 126/188 (67%)
 Frame = -3

Query: 586  GNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRPDLVEKIIEEMSQMDLTPDRVVYN 407
            GN+++C+ LY++M  +GIKPTL T+H LIS+  K+  +L E++  EMS   L PD +VYN
Sbjct: 613  GNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMS---LKPDLLVYN 669

Query: 406  ELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLFDEMIVK 227
             ++ C+  H +++KA  L   M+ K I  DK TYNSLI GQLK+G L   R L DEM  +
Sbjct: 670  GVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAR 729

Query: 226  GLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLREEGRFEEA 47
             + P   T+N +++ HC++KD   AY+WY+EM + GF   V + N+L+SGL+EE R +EA
Sbjct: 730  EMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEA 789

Query: 46   ETISSEIS 23
            E + SE++
Sbjct: 790  EIVISEMN 797



 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 57/201 (28%), Positives = 104/201 (51%), Gaps = 1/201 (0%)
 Frame = -3

Query: 601 GLCKMGNLEKCLDLYKKMNTAGIKPTLNTFHSLIS-IFEKDRPDLVEKIIEEMSQMDLTP 425
           G CK GN EK   + ++M    I+P+L TF++L+  +F+    +  E +++EM  +   P
Sbjct: 258 GYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVP 317

Query: 424 DRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLF 245
           D   ++ L   +  ++  + A  +Y   ++ G+  +  T + L+    K G ++ A ++ 
Sbjct: 318 DAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEIL 377

Query: 244 DEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLREE 65
              + KGL PN+  +NT+I+ +C+  D+ GA M  + M K G  P     N L+    E 
Sbjct: 378 GREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCEL 437

Query: 64  GRFEEAETISSEISVKGVNKS 2
           G  E AE   +++ +KGV+ S
Sbjct: 438 GEMENAEKEVNKMKLKGVSPS 458



 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 1/188 (0%)
 Frame = -3

Query: 577  EKCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRPDLVEKIIE-EMSQMDLTPDRVVYNEL 401
            +KC D+ K+M   G  P + ++ +LI+   K    L  +I++ +M    ++P   +YN L
Sbjct: 476  DKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNML 535

Query: 400  IQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLFDEMIVKGL 221
            I        I+ A     +ML KGI  + +TYN+LI G    G L  A DL  E+  KGL
Sbjct: 536  IDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGL 595

Query: 220  SPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLREEGRFEEAET 41
             P+  T+N+LI  +    ++      Y+EM ++G  P +   + L+S   +EG  E  E 
Sbjct: 596  KPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTER 654

Query: 40   ISSEISVK 17
            +  E+S+K
Sbjct: 655  LFGEMSLK 662



 Score = 81.6 bits (200), Expect = 9e-14
 Identities = 59/198 (29%), Positives = 93/198 (46%), Gaps = 2/198 (1%)
 Frame = -3

Query: 598 LCKMGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRPDLV--EKIIEEMSQMDLTP 425
           LCK G +EK  ++  +    G+ P    ++++I  + + + DLV     IE M +  + P
Sbjct: 364 LCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCR-KGDLVGARMKIEAMEKQGMKP 422

Query: 424 DRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLF 245
           D + YN LI+ F     ++ A      M  KG+ P   TYN LI G  +        D+ 
Sbjct: 423 DHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDIL 482

Query: 244 DEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLREE 65
            EM   G  PN  ++ TLI   CK   +  A +  ++M   G  P V + N L+ G   +
Sbjct: 483 KEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSK 542

Query: 64  GRFEEAETISSEISVKGV 11
           G+ E+A   S E+  KG+
Sbjct: 543 GKIEDAFRFSKEMLKKGI 560



 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 1/190 (0%)
 Frame = -3

Query: 580 LEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRPDLVE-KIIEEMSQMDLTPDRVVYNE 404
           + +  DL+  +   GI P+ ++   L+    K +   V   +   + + D  P + +Y +
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184

Query: 403 LIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLFDEMIVKG 224
            IQ  V   ++ K   L+  M +  I P    YN LI G  K   +  A  LFDEM+ + 
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244

Query: 223 LSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLREEGRFEEAE 44
           L P+  T+NTLI+ +CK  + + ++   + M      P +   N LL GL + G  E+AE
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304

Query: 43  TISSEISVKG 14
            +  E+   G
Sbjct: 305 NVLKEMKDLG 314



 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 59/198 (29%), Positives = 93/198 (46%), Gaps = 1/198 (0%)
 Frame = -3

Query: 601 GLCKMGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIF-EKDRPDLVEKIIEEMSQMDLTP 425
           G C+ G+L       + M   G+KP    ++ LI  F E    +  EK + +M    ++P
Sbjct: 398 GYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSP 457

Query: 424 DRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLF 245
               YN LI  +       K   +  +M + G  P+ ++Y +LI    K   L  A+ + 
Sbjct: 458 SVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVK 517

Query: 244 DEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLREE 65
            +M  +G+SP    +N LI+  C    I+ A+ + KEMLK G    +   N L+ GL   
Sbjct: 518 RDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMT 577

Query: 64  GRFEEAETISSEISVKGV 11
           G+  EAE +  EIS KG+
Sbjct: 578 GKLSEAEDLLLEISRKGL 595



 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 53/195 (27%), Positives = 97/195 (49%), Gaps = 1/195 (0%)
 Frame = -3

Query: 592 KMGNLEKCLDLYKKMNTAGIKPTLNTFHSLIS-IFEKDRPDLVEKIIEEMSQMDLTPDRV 416
           K+ ++ K L+L+ +M    I P++  ++ LI  + +  R +  E++ +EM    L P  +
Sbjct: 191 KLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLI 250

Query: 415 VYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLFDEM 236
            YN LI  +    N +K+  +   M    I P  +T+N+L+ G  K G ++ A ++  EM
Sbjct: 251 TYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEM 310

Query: 235 IVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLREEGRF 56
              G  P+  TF+ L + +   +  + A   Y+  + +G       C+ LL+ L +EG+ 
Sbjct: 311 KDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKI 370

Query: 55  EEAETISSEISVKGV 11
           E+AE I      KG+
Sbjct: 371 EKAEEILGREMAKGL 385



 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 49/191 (25%), Positives = 93/191 (48%), Gaps = 1/191 (0%)
 Frame = -3

Query: 577 EKCLDLYKKMNTAGIKPTLNTFHSLISIFEKD-RPDLVEKIIEEMSQMDLTPDRVVYNEL 401
           E  L +Y+    +G+K    T   L++   K+ + +  E+I+       L P+ V+YN +
Sbjct: 336 EAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTM 395

Query: 400 IQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLFDEMIVKGL 221
           I  +    ++  A      M  +G+ PD + YN LI    ++G ++ A    ++M +KG+
Sbjct: 396 IDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGV 455

Query: 220 SPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLREEGRFEEAET 41
           SP+  T+N LI  + +  + D  +   KEM   G  P V     L++ L +  +  EA+ 
Sbjct: 456 SPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQI 515

Query: 40  ISSEISVKGVN 8
           +  ++  +GV+
Sbjct: 516 VKRDMEDRGVS 526


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