BLASTX nr result

ID: Scutellaria24_contig00028118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00028118
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298921.1| predicted protein [Populus trichocarpa] gi|2...   189   3e-46
ref|XP_004146072.1| PREDICTED: pentatricopeptide repeat-containi...   186   3e-45
ref|XP_002267684.1| PREDICTED: pentatricopeptide repeat-containi...   185   5e-45
emb|CAN60667.1| hypothetical protein VITISV_028261 [Vitis vinifera]   184   7e-45
ref|XP_002521673.1| pentatricopeptide repeat-containing protein,...   173   2e-41

>ref|XP_002298921.1| predicted protein [Populus trichocarpa] gi|222846179|gb|EEE83726.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score =  189 bits (480), Expect = 3e-46
 Identities = 90/145 (62%), Positives = 116/145 (80%), Gaps = 1/145 (0%)
 Frame = -1

Query: 434 SHKDWLSQPQVIRIFQTLKNPNFTLPLFDQLSSRKDYRPNESLYTTLIDKLAGAKNFDGI 255
           +HKDWLS  +VI+IF+ LK+PN  + +++Q S RKDY+PNE+LYT +I+KLA AKNFD I
Sbjct: 3   THKDWLSPNEVIKIFENLKDPNSIISVWNQYSKRKDYKPNEALYTQVINKLAQAKNFDAI 62

Query: 254 EALMRRIKLDRKCRLSDGFFRHVIKIYGHSAGRINRAVETLFDMP-NYKCWPSVATFNCV 78
           E +M++IKLD+ CRLS+ FF +VIKIYG  AGRI +A+ETLFDMP  Y CWP+V +FN V
Sbjct: 63  EDIMQKIKLDKSCRLSNDFFHNVIKIYGQLAGRIKKAMETLFDMPKGYNCWPNVKSFNLV 122

Query: 77  LNLLVSTKQFEVVHEVYMGASRLAV 3
           LNLLVS K F+VVHEVY+ A  L +
Sbjct: 123 LNLLVSAKVFDVVHEVYLQAPMLGI 147


>ref|XP_004146072.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Cucumis sativus]
           gi|449503658|ref|XP_004162112.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Cucumis sativus]
          Length = 411

 Score =  186 bits (471), Expect = 3e-45
 Identities = 87/148 (58%), Positives = 111/148 (75%)
 Frame = -1

Query: 446 PDLRSHKDWLSQPQVIRIFQTLKNPNFTLPLFDQLSSRKDYRPNESLYTTLIDKLAGAKN 267
           P   SH+DWLS  +VI I Q +++P+  L    Q S+RKDY+PN+ +YT ++ +LA  + 
Sbjct: 47  PHKLSHRDWLSPNEVINIIQQIQHPSSVLAFLHQWSNRKDYKPNKEIYTLVVSRLAEGRL 106

Query: 266 FDGIEALMRRIKLDRKCRLSDGFFRHVIKIYGHSAGRINRAVETLFDMPNYKCWPSVATF 87
           FD IE +M RIK +R  RLSD FF HVIKIYG+ AGR+N+A++TLFDMPNY CWPSV TF
Sbjct: 107 FDDIEKVMLRIKAERNFRLSDEFFYHVIKIYGNVAGRLNKAIDTLFDMPNYNCWPSVKTF 166

Query: 86  NCVLNLLVSTKQFEVVHEVYMGASRLAV 3
           N VLNLLVS K F+VVHEVYMGA +L +
Sbjct: 167 NFVLNLLVSAKMFDVVHEVYMGAPKLGI 194


>ref|XP_002267684.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Vitis vinifera]
          Length = 393

 Score =  185 bits (469), Expect = 5e-45
 Identities = 84/143 (58%), Positives = 114/143 (79%)
 Frame = -1

Query: 431 HKDWLSQPQVIRIFQTLKNPNFTLPLFDQLSSRKDYRPNESLYTTLIDKLAGAKNFDGIE 252
           HKDWLS  +V++IF  L+NP   +P+ D +S RKD++PNE+LYT +I+KLA A+ FD IE
Sbjct: 46  HKDWLSPREVLKIFDGLRNPESVMPVLDSVSKRKDFKPNEALYTLVINKLAQARMFDAIE 105

Query: 251 ALMRRIKLDRKCRLSDGFFRHVIKIYGHSAGRINRAVETLFDMPNYKCWPSVATFNCVLN 72
            +++ +K+D++CRLSD FF +VIK+YG+ AG+ +RAVETLFDMP + CWPSV TFN VLN
Sbjct: 106 DVIKTLKIDKQCRLSDVFFYNVIKVYGNVAGQPDRAVETLFDMPKFHCWPSVKTFNLVLN 165

Query: 71  LLVSTKQFEVVHEVYMGASRLAV 3
           +LVS K+F+VVH+VY GA  L V
Sbjct: 166 MLVSAKRFDVVHKVYAGAPELGV 188


>emb|CAN60667.1| hypothetical protein VITISV_028261 [Vitis vinifera]
          Length = 393

 Score =  184 bits (468), Expect = 7e-45
 Identities = 84/143 (58%), Positives = 113/143 (79%)
 Frame = -1

Query: 431 HKDWLSQPQVIRIFQTLKNPNFTLPLFDQLSSRKDYRPNESLYTTLIDKLAGAKNFDGIE 252
           HKDWLS  +V++IF  L+NP   +P+ D +  RKD++PNE+LYT +I+KLA A+ FD IE
Sbjct: 46  HKDWLSPREVLKIFDGLRNPESVMPVLDSVCKRKDFKPNEALYTLVINKLAQARMFDAIE 105

Query: 251 ALMRRIKLDRKCRLSDGFFRHVIKIYGHSAGRINRAVETLFDMPNYKCWPSVATFNCVLN 72
            +++ +K+D++CRLSD FF +VIK+YG+ AGR +RAVETLFDMP + CWPSV TFN VLN
Sbjct: 106 DVIKTLKIDKQCRLSDVFFYNVIKVYGNVAGRPDRAVETLFDMPKFHCWPSVKTFNLVLN 165

Query: 71  LLVSTKQFEVVHEVYMGASRLAV 3
           +LVS K+F+VVH+VY GA  L V
Sbjct: 166 MLVSAKRFDVVHKVYAGAPELGV 188


>ref|XP_002521673.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539064|gb|EEF40660.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 341

 Score =  173 bits (438), Expect = 2e-41
 Identities = 83/134 (61%), Positives = 107/134 (79%), Gaps = 1/134 (0%)
 Frame = -1

Query: 401 IRIFQTLKNPNFTLPLFDQLSSRKDYRPNESLYTTLIDKLAGAKNFDGIEALMRRIKLDR 222
           +RIF+++K+PN    ++DQ ++RKDY+PNE+LYT +I+KLA AKNFD IE +M+RIKL++
Sbjct: 1   MRIFESIKDPNSVFSVWDQYTNRKDYKPNEALYTLVINKLAQAKNFDAIEDIMQRIKLEK 60

Query: 221 KCRLSDGFFRHVIKIYGHSAGRINRAVETLFDMP-NYKCWPSVATFNCVLNLLVSTKQFE 45
            CRLS+GFF +VIKIYGH AGRI  A++TLFDMP  Y CWP V TFN VLNLLVS + F+
Sbjct: 61  SCRLSNGFFYNVIKIYGHLAGRIKVAIDTLFDMPRGYNCWPDVKTFNLVLNLLVSARIFD 120

Query: 44  VVHEVYMGASRLAV 3
           VVHE+Y  A  L V
Sbjct: 121 VVHEIYEKAPILGV 134


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