BLASTX nr result

ID: Scutellaria24_contig00028100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00028100
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318314.1| predicted protein [Populus trichocarpa] gi|2...   138   4e-31
ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containi...   137   9e-31
ref|XP_003637572.1| Pentatricopeptide repeat-containing protein ...   134   1e-29
ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containi...   129   3e-28
emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]   129   3e-28

>ref|XP_002318314.1| predicted protein [Populus trichocarpa] gi|222858987|gb|EEE96534.1|
           predicted protein [Populus trichocarpa]
          Length = 539

 Score =  138 bits (348), Expect = 4e-31
 Identities = 66/84 (78%), Positives = 74/84 (88%)
 Frame = +2

Query: 2   ACMVDLLGRAGRLNEAMKLIEDMPMQANPIIWVALLSACRLHGNVELGEHAANQLLELKF 181
           ACMVDLLGRAGRLNEAM+LIE M M+ + I+WVALLS CR+H NVELGEHAA QLLEL  
Sbjct: 308 ACMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNS 367

Query: 182 ENDGLYTLLSNLYASARRWKDVAK 253
           ENDG YTLLSN+YA+ARRWKDVA+
Sbjct: 368 ENDGSYTLLSNIYANARRWKDVAR 391


>ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16860-like
            [Glycine max]
          Length = 986

 Score =  137 bits (345), Expect = 9e-31
 Identities = 65/84 (77%), Positives = 74/84 (88%)
 Frame = +2

Query: 2    ACMVDLLGRAGRLNEAMKLIEDMPMQANPIIWVALLSACRLHGNVELGEHAANQLLELKF 181
            ACMVDL GRAGRL EAMKLI +MPM+  P++WVALLSACRLH NVELGE AAN+LLEL+ 
Sbjct: 755  ACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELES 814

Query: 182  ENDGLYTLLSNLYASARRWKDVAK 253
             NDG YTLLSN+YA+ARRWKDVA+
Sbjct: 815  GNDGSYTLLSNIYANARRWKDVAR 838


>ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355503507|gb|AES84710.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 833

 Score =  134 bits (336), Expect = 1e-29
 Identities = 61/84 (72%), Positives = 73/84 (86%)
 Frame = +2

Query: 2   ACMVDLLGRAGRLNEAMKLIEDMPMQANPIIWVALLSACRLHGNVELGEHAANQLLELKF 181
           ACMVDLLGRAGRL EAM+LI DMP++  P++W+ALLSACR+H N EL E AA +LLELK 
Sbjct: 609 ACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELAEFAAKKLLELKA 668

Query: 182 ENDGLYTLLSNLYASARRWKDVAK 253
           +NDG YTLLSN+YA+ARRWKDVA+
Sbjct: 669 DNDGTYTLLSNIYANARRWKDVAR 692


>ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Vitis vinifera]
          Length = 852

 Score =  129 bits (324), Expect = 3e-28
 Identities = 62/84 (73%), Positives = 73/84 (86%)
 Frame = +2

Query: 2   ACMVDLLGRAGRLNEAMKLIEDMPMQANPIIWVALLSACRLHGNVELGEHAANQLLELKF 181
           ACMVDLL RAGRL+EAM+LI  MPM+  P +WVALLSACR++ NVELGE+AANQLLEL+ 
Sbjct: 621 ACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELES 680

Query: 182 ENDGLYTLLSNLYASARRWKDVAK 253
            NDG YTLLSN+YA+AR WKDVA+
Sbjct: 681 GNDGSYTLLSNIYANARCWKDVAR 704


>emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  129 bits (324), Expect = 3e-28
 Identities = 62/84 (73%), Positives = 73/84 (86%)
 Frame = +2

Query: 2   ACMVDLLGRAGRLNEAMKLIEDMPMQANPIIWVALLSACRLHGNVELGEHAANQLLELKF 181
           ACMVDLL RAGRL+EAM+LI  MPM+  P +WVALLSACR++ NVELGE+AANQLLEL+ 
Sbjct: 640 ACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELES 699

Query: 182 ENDGLYTLLSNLYASARRWKDVAK 253
            NDG YTLLSN+YA+AR WKDVA+
Sbjct: 700 GNDGSYTLLSNIYANARCWKDVAR 723


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