BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00028054
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518527.1| pentatricopeptide repeat-containing protein,...   108   5e-22
ref|XP_002305605.1| predicted protein [Populus trichocarpa] gi|2...   104   9e-21
ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containi...    94   2e-17
ref|NP_193849.2| pentatricopeptide repeat-containing protein [Ar...    75   4e-12
sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-c...    75   4e-12

>ref|XP_002518527.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542372|gb|EEF43914.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 599

 Score =  108 bits (270), Expect = 5e-22
 Identities = 58/149 (38%), Positives = 90/149 (60%), Gaps = 1/149 (0%)
 Frame = -2

Query: 449 NLDFKPDFGVRCEVIRILFGSELSNLGHPLLNSIVQDHPPAKIV-SLLQPRRSADSQSIS 273
           NL+F PD   +C VI++  GS+L      +L+S+++ +P    + +++Q  R     S+ 
Sbjct: 108 NLNFNPDLKSQCHVIQLSLGSDLPRAAKKILDSLIKTYPSNLFLETMVQACRG--KSSLL 165

Query: 272 PILNSVIECYCNK*LYLRSLEFYQMAKQYRVRLSVDTCNSLLNLLADKNEPRLAWCFYAS 93
             LN V+E Y +K  +L  LE Y+  +      SV  CN LL+ L  ++E RLAWCFY +
Sbjct: 166 CTLNFVLEFYSHKGSFLEGLEVYKKMRVIGCTPSVHACNVLLDALQRESEIRLAWCFYCA 225

Query: 92  ILRNGILGNNFTWSVIAKILHKDGKFERV 6
           ++R G+L + FTWS++A IL KDG FER+
Sbjct: 226 MIRVGVLPDKFTWSLVAHILCKDGNFERI 254


>ref|XP_002305605.1| predicted protein [Populus trichocarpa] gi|222848569|gb|EEE86116.1|
           predicted protein [Populus trichocarpa]
          Length = 564

 Score =  104 bits (259), Expect = 9e-21
 Identities = 54/148 (36%), Positives = 88/148 (59%)
 Frame = -2

Query: 449 NLDFKPDFGVRCEVIRILFGSELSNLGHPLLNSIVQDHPPAKIVSLLQPRRSADSQSISP 270
           NL  KPD   +C +I I   S L+    P+++S+V+ H  + +   +       S   S 
Sbjct: 79  NLKLKPDLKSQCHIINICVNSGLTLPVRPIMDSLVKTHHVSVLGEAMVDSCRGKSLK-SD 137

Query: 269 ILNSVIECYCNK*LYLRSLEFYQMAKQYRVRLSVDTCNSLLNLLADKNEPRLAWCFYASI 90
             + V+ECY +K L++ SLE ++  +      S   CNS+L++L  +NE +LAWCFY ++
Sbjct: 138 AFSFVLECYSHKGLFMESLEMFRKMRGNGFIASGTACNSVLDVLQRENEIKLAWCFYCAM 197

Query: 89  LRNGILGNNFTWSVIAKILHKDGKFERV 6
           +++G+L +  TWS+IA+IL KDG FER+
Sbjct: 198 IKDGVLPDKLTWSLIAQILCKDGNFERI 225


>ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21170-like [Vitis vinifera]
          Length = 569

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 56/149 (37%), Positives = 90/149 (60%), Gaps = 1/149 (0%)
 Frame = -2

Query: 449 NLDFKPDFGVRCEVIRILFGSELSNLGHPLLNSIVQDHPPAKIV-SLLQPRRSADSQSIS 273
           NL F+PD     ++IRI   S L      +L+S+++    + +V S++Q  R  DS+S  
Sbjct: 87  NLGFQPDLAAHSQIIRISIQSGLFQPAKGILDSLIETQKVSVLVDSVIQACRGKDSES-- 144

Query: 272 PILNSVIECYCNK*LYLRSLEFYQMAKQYRVRLSVDTCNSLLNLLADKNEPRLAWCFYAS 93
           P+L  V+ECY +K L++ +LE ++    +    SV +CN+LL+ L  +NE +LAWC   +
Sbjct: 145 PVLGFVLECYSSKGLFIEALEVFRRITIHGYVPSVRSCNALLDSLQRENEIKLAWCVCGA 204

Query: 92  ILRNGILGNNFTWSVIAKILHKDGKFERV 6
           ++RNG+L +   +  IA IL K+GK ERV
Sbjct: 205 LIRNGVLPD---YVRIALILCKNGKLERV 230


>ref|NP_193849.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|332659015|gb|AEE84415.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 551

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 47/148 (31%), Positives = 78/148 (52%)
 Frame = -2

Query: 449 NLDFKPDFGVRCEVIRILFGSELSNLGHPLLNSIVQDHPPAKIVSLLQPRRSADSQSISP 270
           +L F+PD    C VI +   S L      LL  +V+ +  + +V  +  R      S+S 
Sbjct: 96  HLRFEPDLKSHCRVIEVAAESGLLERAEMLLRPLVETNSVSLVVGEMH-RWFEGEVSLSV 154

Query: 269 ILNSVIECYCNK*LYLRSLEFYQMAKQYRVRLSVDTCNSLLNLLADKNEPRLAWCFYASI 90
            L+ V+E Y  K  +   LE +   ++ R+  S    NSLL  L  +N+ R+A C Y+++
Sbjct: 155 SLSLVLEYYALKGSHHNGLEVFGFMRRLRLSPSQSAYNSLLGSLVKENQFRVALCLYSAM 214

Query: 89  LRNGILGNNFTWSVIAKILHKDGKFERV 6
           +RNGI+ +  TW +IA+IL + G+ + V
Sbjct: 215 VRNGIVSDELTWDLIAQILCEQGRSKSV 242


>sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21170
          Length = 585

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 47/148 (31%), Positives = 78/148 (52%)
 Frame = -2

Query: 449 NLDFKPDFGVRCEVIRILFGSELSNLGHPLLNSIVQDHPPAKIVSLLQPRRSADSQSISP 270
           +L F+PD    C VI +   S L      LL  +V+ +  + +V  +  R      S+S 
Sbjct: 96  HLRFEPDLKSHCRVIEVAAESGLLERAEMLLRPLVETNSVSLVVGEMH-RWFEGEVSLSV 154

Query: 269 ILNSVIECYCNK*LYLRSLEFYQMAKQYRVRLSVDTCNSLLNLLADKNEPRLAWCFYASI 90
            L+ V+E Y  K  +   LE +   ++ R+  S    NSLL  L  +N+ R+A C Y+++
Sbjct: 155 SLSLVLEYYALKGSHHNGLEVFGFMRRLRLSPSQSAYNSLLGSLVKENQFRVALCLYSAM 214

Query: 89  LRNGILGNNFTWSVIAKILHKDGKFERV 6
           +RNGI+ +  TW +IA+IL + G+ + V
Sbjct: 215 VRNGIVSDELTWDLIAQILCEQGRSKSV 242