BLASTX nr result

ID: Scutellaria24_contig00028036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00028036
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278977.1| PREDICTED: lissencephaly-1 homolog [Vitis vi...   107   8e-22
emb|CAN70337.1| hypothetical protein VITISV_011436 [Vitis vinifera]   107   8e-22
ref|XP_003527835.1| PREDICTED: lissencephaly-1 homolog [Glycine ...   106   2e-21
ref|XP_002516538.1| F-box and wd40 domain protein, putative [Ric...   104   8e-21
ref|XP_002281362.2| PREDICTED: uncharacterized WD repeat-contain...   101   7e-20

>ref|XP_002278977.1| PREDICTED: lissencephaly-1 homolog [Vitis vinifera]
          Length = 448

 Score =  107 bits (268), Expect = 8e-22
 Identities = 53/93 (56%), Positives = 68/93 (73%), Gaps = 7/93 (7%)
 Frame = -3

Query: 311 FHSCLAVIDGHHRPVKCLAAAIETNEFVKALLVYSASLDQTLKVWRVKIYPTEKVSL--- 141
           FHSCLAV+DGHH PV+CLAA++E    ++ LLVYSASLD+T KVWRVK+   EK ++   
Sbjct: 359 FHSCLAVMDGHHGPVRCLAASLE----IEGLLVYSASLDRTFKVWRVKLLTPEKAAMEEL 414

Query: 140 ----DKTDDDSNCKMSPVLSPAWVEKKIQGSDY 54
               D+  +   CKMSPVLSP+WVEKKIQ + +
Sbjct: 415 VVTNDQQTEIEECKMSPVLSPSWVEKKIQANHF 447


>emb|CAN70337.1| hypothetical protein VITISV_011436 [Vitis vinifera]
          Length = 448

 Score =  107 bits (268), Expect = 8e-22
 Identities = 53/93 (56%), Positives = 68/93 (73%), Gaps = 7/93 (7%)
 Frame = -3

Query: 311 FHSCLAVIDGHHRPVKCLAAAIETNEFVKALLVYSASLDQTLKVWRVKIYPTEKVSL--- 141
           FHSCLAV+DGHH PV+CLAA++E    ++ LLVYSASLD+T KVWRVK+   EK ++   
Sbjct: 359 FHSCLAVMDGHHGPVRCLAASLE----IEGLLVYSASLDRTFKVWRVKLLTPEKAAMEEL 414

Query: 140 ----DKTDDDSNCKMSPVLSPAWVEKKIQGSDY 54
               D+  +   CKMSPVLSP+WVEKKIQ + +
Sbjct: 415 VVTNDQQTEIEECKMSPVLSPSWVEKKIQANHF 447


>ref|XP_003527835.1| PREDICTED: lissencephaly-1 homolog [Glycine max]
          Length = 457

 Score =  106 bits (264), Expect = 2e-21
 Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 11/95 (11%)
 Frame = -3

Query: 311 FHSCLAVIDGHHRPVKCLAAAIETNEFVKALLVYSASLDQTLKVWRVKIYPTEKVSLDKT 132
           +H CL V+DGH  PV+CLAA +E  + V   LVYSASLDQT KVWR+K+ P EK+ +D +
Sbjct: 360 YHECLTVLDGHRGPVRCLAACLEMEKVVMGFLVYSASLDQTFKVWRIKVLPDEKMCMDYS 419

Query: 131 DDDSNCK-----------MSPVLSPAWVEKKIQGS 60
                C+           MSPVLSP+WVEKK+QGS
Sbjct: 420 QYSDQCEAATRVKIRDYDMSPVLSPSWVEKKLQGS 454


>ref|XP_002516538.1| F-box and wd40 domain protein, putative [Ricinus communis]
           gi|223544358|gb|EEF45879.1| F-box and wd40 domain
           protein, putative [Ricinus communis]
          Length = 263

 Score =  104 bits (259), Expect = 8e-21
 Identities = 49/92 (53%), Positives = 63/92 (68%), Gaps = 6/92 (6%)
 Frame = -3

Query: 311 FHSCLAVIDGHHRPVKCLAAAIETNEFVKALLVYSASLDQTLKVWRVKIYPTEKVSLDKT 132
           FH CLAV+D H  PV+CLAA +E  + +   LVYSASLD T KVWR+K+ P EKV LD T
Sbjct: 171 FHECLAVLDAHRGPVRCLAACLEMEKVMMGFLVYSASLDHTFKVWRIKVLPEEKVCLDYT 230

Query: 131 DDD------SNCKMSPVLSPAWVEKKIQGSDY 54
           D        +  +MSPVLSP+WVE+K++ S +
Sbjct: 231 DQSDPKIKATEYEMSPVLSPSWVERKLRASPF 262


>ref|XP_002281362.2| PREDICTED: uncharacterized WD repeat-containing protein
           alr2800-like [Vitis vinifera]
          Length = 400

 Score =  101 bits (251), Expect = 7e-20
 Identities = 49/95 (51%), Positives = 66/95 (69%), Gaps = 9/95 (9%)
 Frame = -3

Query: 311 FHSCLAVIDGHHRPVKCLAAAIETNEFVKALLVYSASLDQTLKVWRVKIYPTE--KVSLD 138
           +H CLAV+DGH  PV+CLAA +E  + V   LVYSASLDQT KVWR+++ P +  K+ LD
Sbjct: 305 YHECLAVLDGHRGPVRCLAACLEMEKVVMGFLVYSASLDQTFKVWRIRVLPDDQKKMCLD 364

Query: 137 KTDDDSNCK-------MSPVLSPAWVEKKIQGSDY 54
           +++   + K       MSPVLSP+WVEKK+Q S +
Sbjct: 365 ESNRSDSLKAKIMEYEMSPVLSPSWVEKKLQSSHF 399


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