BLASTX nr result

ID: Scutellaria24_contig00028016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00028016
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318725.1| predicted protein [Populus trichocarpa] gi|2...   183   1e-44
ref|XP_002518663.1| U520, putative [Ricinus communis] gi|2235420...   181   4e-44
ref|XP_002322252.1| predicted protein [Populus trichocarpa] gi|2...   180   9e-44
ref|NP_173520.1| putative U5 small nuclear ribonucleoprotein hel...   179   3e-43
ref|XP_002893142.1| EMB1507 [Arabidopsis lyrata subsp. lyrata] g...   179   3e-43

>ref|XP_002318725.1| predicted protein [Populus trichocarpa] gi|222859398|gb|EEE96945.1|
            predicted protein [Populus trichocarpa]
          Length = 2175

 Score =  183 bits (464), Expect = 1e-44
 Identities = 90/100 (90%), Positives = 95/100 (95%)
 Frame = -3

Query: 302  QQLPIESQFISKLADQLNAEIVLGTVQNAREACQWLLYTYLFVRMMRNPTLYGLAPDVLK 123
            QQLPIESQF+SKLADQLNAEIVLG+VQNAREAC WL YTYL+VRMMRNPTLYGLAPDVL 
Sbjct: 909  QQLPIESQFVSKLADQLNAEIVLGSVQNAREACHWLEYTYLYVRMMRNPTLYGLAPDVLT 968

Query: 122  SDKTLEERRADLIHSAASVLDKNNLVKYDRKSGYFQVTDL 3
             D TLEERRADLIHSAA++LDKNNLVKYDRKSGYFQVTDL
Sbjct: 969  RDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDL 1008


>ref|XP_002518663.1| U520, putative [Ricinus communis] gi|223542044|gb|EEF43588.1| U520,
           putative [Ricinus communis]
          Length = 1809

 Score =  181 bits (460), Expect = 4e-44
 Identities = 88/100 (88%), Positives = 95/100 (95%)
 Frame = -3

Query: 302 QQLPIESQFISKLADQLNAEIVLGTVQNAREACQWLLYTYLFVRMMRNPTLYGLAPDVLK 123
           QQLPIESQF+SKLADQLNAEIVLGTVQNAREAC WL YTYL++RM+RNPTLYGLAPDVL 
Sbjct: 549 QQLPIESQFVSKLADQLNAEIVLGTVQNAREACNWLGYTYLYIRMLRNPTLYGLAPDVLT 608

Query: 122 SDKTLEERRADLIHSAASVLDKNNLVKYDRKSGYFQVTDL 3
            D TLEERRADLIHS+A++LDKNNLVKYDRKSGYFQVTDL
Sbjct: 609 RDITLEERRADLIHSSATILDKNNLVKYDRKSGYFQVTDL 648


>ref|XP_002322252.1| predicted protein [Populus trichocarpa] gi|222869248|gb|EEF06379.1|
            predicted protein [Populus trichocarpa]
          Length = 2157

 Score =  180 bits (457), Expect = 9e-44
 Identities = 89/100 (89%), Positives = 94/100 (94%)
 Frame = -3

Query: 302  QQLPIESQFISKLADQLNAEIVLGTVQNAREACQWLLYTYLFVRMMRNPTLYGLAPDVLK 123
            QQLPIESQFISKLADQLNAEIVLGTVQNAREAC WL YTYL++RM+RNPTLYGLAPDVL 
Sbjct: 889  QQLPIESQFISKLADQLNAEIVLGTVQNAREACHWLGYTYLYIRMLRNPTLYGLAPDVLT 948

Query: 122  SDKTLEERRADLIHSAASVLDKNNLVKYDRKSGYFQVTDL 3
             D TLEERRADLIHSAA++LDKNNLVKYDRKSGYFQ TDL
Sbjct: 949  RDITLEERRADLIHSAAAILDKNNLVKYDRKSGYFQGTDL 988


>ref|NP_173520.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis
            thaliana] gi|334182730|ref|NP_001185050.1| putative U5
            small nuclear ribonucleoprotein helicase [Arabidopsis
            thaliana] gi|4836892|gb|AAD30595.1|AC007369_5 Putative
            RNA helicase [Arabidopsis thaliana]
            gi|332191925|gb|AEE30046.1| putative U5 small nuclear
            ribonucleoprotein helicase [Arabidopsis thaliana]
            gi|332191926|gb|AEE30047.1| putative U5 small nuclear
            ribonucleoprotein helicase [Arabidopsis thaliana]
          Length = 2171

 Score =  179 bits (453), Expect = 3e-43
 Identities = 87/100 (87%), Positives = 93/100 (93%)
 Frame = -3

Query: 302  QQLPIESQFISKLADQLNAEIVLGTVQNAREACQWLLYTYLFVRMMRNPTLYGLAPDVLK 123
            +QLPIESQFISKLADQLNAEIVLGTVQNAREAC WL YTYL++RM+RNPTLYGLAPD L 
Sbjct: 909  EQLPIESQFISKLADQLNAEIVLGTVQNAREACHWLGYTYLYIRMVRNPTLYGLAPDALA 968

Query: 122  SDKTLEERRADLIHSAASVLDKNNLVKYDRKSGYFQVTDL 3
             D  LEERRADLIHSAA++LDKNNLVKYDRKSGYFQVTDL
Sbjct: 969  KDVVLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDL 1008


>ref|XP_002893142.1| EMB1507 [Arabidopsis lyrata subsp. lyrata]
            gi|297338984|gb|EFH69401.1| EMB1507 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 2171

 Score =  179 bits (453), Expect = 3e-43
 Identities = 87/100 (87%), Positives = 93/100 (93%)
 Frame = -3

Query: 302  QQLPIESQFISKLADQLNAEIVLGTVQNAREACQWLLYTYLFVRMMRNPTLYGLAPDVLK 123
            +QLPIESQFISKLADQLNAEIVLGTVQNAREAC WL YTYL++RM+RNPTLYGLAPD L 
Sbjct: 909  EQLPIESQFISKLADQLNAEIVLGTVQNAREACHWLGYTYLYIRMVRNPTLYGLAPDALA 968

Query: 122  SDKTLEERRADLIHSAASVLDKNNLVKYDRKSGYFQVTDL 3
             D  LEERRADLIHSAA++LDKNNLVKYDRKSGYFQVTDL
Sbjct: 969  KDVVLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDL 1008


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