BLASTX nr result

ID: Scutellaria24_contig00027915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00027915
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16890.3| unnamed protein product [Vitis vinifera]              152   4e-35
ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containi...   152   4e-35
ref|XP_004140465.1| PREDICTED: pentatricopeptide repeat-containi...   150   1e-34
emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]   149   2e-34
ref|XP_002532893.1| pentatricopeptide repeat-containing protein,...   144   8e-33

>emb|CBI16890.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  152 bits (383), Expect = 4e-35
 Identities = 75/115 (65%), Positives = 91/115 (79%)
 Frame = +3

Query: 3   SIVTSSVMNQALLNLSPHGFSISWSFFKWVETIPQFKHSLQSSWTMICILTKQRHFRDAQ 182
           S +TS+++NQ LLNLS  G  +SW+FFKWVE+    KHSLQSSWTMI  L K + F+ AQ
Sbjct: 61  SNLTSTILNQVLLNLSLDGCCVSWAFFKWVESNLNHKHSLQSSWTMIHTLAKHKQFKTAQ 120

Query: 183 NLLEKIARRDFLSSPAVLNALVNSYDDLDVNSHVLSWLVIFYANSKMNPDAIQVF 347
           NLLE+IA RD+LSSP+VLNA+V  +DD D NS +LSWLVIFYANS+M  DAIQVF
Sbjct: 121 NLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILSWLVIFYANSRMTQDAIQVF 175


>ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Vitis vinifera]
          Length = 590

 Score =  152 bits (383), Expect = 4e-35
 Identities = 75/115 (65%), Positives = 91/115 (79%)
 Frame = +3

Query: 3   SIVTSSVMNQALLNLSPHGFSISWSFFKWVETIPQFKHSLQSSWTMICILTKQRHFRDAQ 182
           S +TS+++NQ LLNLS  G  +SW+FFKWVE+    KHSLQSSWTMI  L K + F+ AQ
Sbjct: 36  SNLTSTILNQVLLNLSLDGCCVSWAFFKWVESNLNHKHSLQSSWTMIHTLAKHKQFKTAQ 95

Query: 183 NLLEKIARRDFLSSPAVLNALVNSYDDLDVNSHVLSWLVIFYANSKMNPDAIQVF 347
           NLLE+IA RD+LSSP+VLNA+V  +DD D NS +LSWLVIFYANS+M  DAIQVF
Sbjct: 96  NLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILSWLVIFYANSRMTQDAIQVF 150


>ref|XP_004140465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Cucumis sativus]
           gi|449518107|ref|XP_004166085.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g38730-like [Cucumis sativus]
          Length = 578

 Score =  150 bits (378), Expect = 1e-34
 Identities = 75/116 (64%), Positives = 91/116 (78%), Gaps = 2/116 (1%)
 Frame = +3

Query: 3   SIVTSSVMNQALLNLSPH--GFSISWSFFKWVETIPQFKHSLQSSWTMICILTKQRHFRD 176
           S +TS  ++Q LL LS +  G S+SW+FFKWVE IP +KHSLQSSW MI ILT+ +HF+ 
Sbjct: 27  SSLTSKSIHQILLRLSFYCSGPSLSWAFFKWVELIPDYKHSLQSSWAMIFILTEHKHFKT 86

Query: 177 AQNLLEKIARRDFLSSPAVLNALVNSYDDLDVNSHVLSWLVIFYANSKMNPDAIQV 344
           AQ LLEKIA +DF+SSP VLNALV SYD+ DVN+H+LSWL+I Y N KM  DAIQV
Sbjct: 87  AQGLLEKIAHKDFISSPLVLNALVTSYDNPDVNAHILSWLMIIYVNCKMPQDAIQV 142


>emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
          Length = 590

 Score =  149 bits (377), Expect = 2e-34
 Identities = 74/115 (64%), Positives = 90/115 (78%)
 Frame = +3

Query: 3   SIVTSSVMNQALLNLSPHGFSISWSFFKWVETIPQFKHSLQSSWTMICILTKQRHFRDAQ 182
           S +TS+++NQ LLNLS  G  +SW+FFKWVE+     HSLQSSWTMI  L K + F+ AQ
Sbjct: 36  SNLTSTILNQVLLNLSLDGCCVSWAFFKWVESNLNHXHSLQSSWTMIHTLAKHKQFKTAQ 95

Query: 183 NLLEKIARRDFLSSPAVLNALVNSYDDLDVNSHVLSWLVIFYANSKMNPDAIQVF 347
           NLLE+IA RD+LSSP+VLNA+V  +DD D NS +LSWLVIFYANS+M  DAIQVF
Sbjct: 96  NLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILSWLVIFYANSRMTQDAIQVF 150


>ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527353|gb|EEF29498.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 625

 Score =  144 bits (363), Expect = 8e-33
 Identities = 74/118 (62%), Positives = 93/118 (78%), Gaps = 3/118 (2%)
 Frame = +3

Query: 3   SIVTSSVMNQALLNLSPH--GFSISWSFFKWVET-IPQFKHSLQSSWTMICILTKQRHFR 173
           SI+T+S ++Q L  LS H  G  +SW+ FKW+E+ IP +KHSLQSSWTMI ILTK +H +
Sbjct: 36  SILTASTLHQVLYQLSLHSQGPCLSWALFKWIESSIPNYKHSLQSSWTMIHILTKFKHLK 95

Query: 174 DAQNLLEKIARRDFLSSPAVLNALVNSYDDLDVNSHVLSWLVIFYANSKMNPDAIQVF 347
            AQ+LLEKIA RDFLS+ +VL+ALV  +DD D+NSHV SWLVI YAN+KM  +AIQVF
Sbjct: 96  TAQSLLEKIAYRDFLSTQSVLSALVRLHDDPDINSHVFSWLVIVYANTKMKQEAIQVF 153


Top