BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00027872
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containi...   192   2e-47
ref|XP_002515418.1| pentatricopeptide repeat-containing protein,...   185   4e-45
ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containi...   177   8e-43
ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arab...   176   2e-42
ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thali...   174   5e-42

>ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
           gi|296082142|emb|CBI21147.3| unnamed protein product
           [Vitis vinifera]
          Length = 1113

 Score =  192 bits (489), Expect = 2e-47
 Identities = 93/133 (69%), Positives = 110/133 (82%)
 Frame = +1

Query: 1   MKCSSQQPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGK 180
           MK SS +PDRVTYIT++DKFSDHGDL++++EFW  ME DG+  DVVTFTILIDALCKVGK
Sbjct: 323 MKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGK 382

Query: 181 VNEAFVVLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVL 360
           V+EAF  LD MK+QG++PNL TYNTLI GLLRL RLDEAL+L ++ME  G    AYTY+L
Sbjct: 383 VDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYIL 442

Query: 361 FIDCYGKLGEADK 399
           FID YGK GE+ K
Sbjct: 443 FIDYYGKSGESGK 455



 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 49/129 (37%), Positives = 78/129 (60%), Gaps = 3/129 (2%)
 Frame = +1

Query: 22   PDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFVV 201
            P+   Y  +M+ F   GD+E+  E +R M  +G + D+ +++I++D LC VGKV++A   
Sbjct: 926  PNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHY 985

Query: 202  LDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTY---VLFIDC 372
             +++K  G+ P+L  YN +I+GL R QR++EAL L D M   G  P+ YTY   +L +  
Sbjct: 986  FEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGI 1045

Query: 373  YGKLGEADK 399
             G + EA K
Sbjct: 1046 AGMVEEAGK 1054



 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 43/125 (34%), Positives = 66/125 (52%)
 Frame = +1

Query: 22  PDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFVV 201
           PD +TY  +M  +   G ++   +    ME +G   +VV    LID L K  +V+EA+ +
Sbjct: 505 PDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKM 564

Query: 202 LDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVLFIDCYGK 381
             +MKE  ++P + TYNTL++GL +  R+ EA  L   M      PN  ++   +DC  K
Sbjct: 565 FQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCK 624

Query: 382 LGEAD 396
            GE D
Sbjct: 625 NGEVD 629



 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 42/132 (31%), Positives = 64/132 (48%)
 Frame = +1

Query: 1   MKCSSQQPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGK 180
           MK     P+  TY T++        L+   E +  ME  G +    T+ + ID   K G+
Sbjct: 393 MKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGE 452

Query: 181 VNEAFVVLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVL 360
             +A    +KMK  GI PN+   N  +  L    RL+EA +  + +++CG  P+A TY +
Sbjct: 453 SGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNI 512

Query: 361 FIDCYGKLGEAD 396
            + CYGK G  D
Sbjct: 513 LMRCYGKAGRVD 524



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 39/126 (30%), Positives = 65/126 (51%)
 Frame = +1

Query: 19  QPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFV 198
           +P   TY  +M       D+E+V    + ME  G + ++ TFTI I  L + GK++EA+ 
Sbjct: 224 KPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYG 283

Query: 199 VLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVLFIDCYG 378
           +L +M + G  P++ TY  LI  L    +L+ A +L   M+     P+  TY+  +D + 
Sbjct: 284 ILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFS 343

Query: 379 KLGEAD 396
             G+ D
Sbjct: 344 DHGDLD 349



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 42/133 (31%), Positives = 65/133 (48%)
 Frame = +1

Query: 1   MKCSSQQPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGK 180
           M+    +P+  T+   +      G ++      + M+  G   DVVT+T+LIDALC  GK
Sbjct: 253 MESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGK 312

Query: 181 VNEAFVVLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVL 360
           +N A  +  KMK     P+  TY TL+        LD   +    ME  G+LP+  T+ +
Sbjct: 313 LNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTI 372

Query: 361 FIDCYGKLGEADK 399
            ID   K+G+ D+
Sbjct: 373 LIDALCKVGKVDE 385



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 39/133 (29%), Positives = 66/133 (49%)
 Frame = +1

Query: 1   MKCSSQQPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGK 180
           MK +   P+ V     +   ++ G LE  +EF+  ++  G   D +T+ IL+    K G+
Sbjct: 463 MKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGR 522

Query: 181 VNEAFVVLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVL 360
           V++A  +L +M+E G  P +   N+LI  L +  R+DEA K+   M++    P   TY  
Sbjct: 523 VDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNT 582

Query: 361 FIDCYGKLGEADK 399
            +   GK G   +
Sbjct: 583 LLAGLGKEGRVQE 595



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 39/132 (29%), Positives = 65/132 (49%)
 Frame = +1

Query: 1    MKCSSQQPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGK 180
            MK +   PD  TY   +D     G ++ + + +  M   G K + +T  I+I  L K   
Sbjct: 814  MKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNS 873

Query: 181  VNEAFVVLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVL 360
            +++A  +   +     SP   TY  LI GLL+L RL+EA +  + M   G +PN   Y +
Sbjct: 874  LDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNI 933

Query: 361  FIDCYGKLGEAD 396
             ++ +GK G+ +
Sbjct: 934  LMNGFGKQGDVE 945



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/98 (35%), Positives = 55/98 (56%)
 Frame = +1

Query: 106  MELDGHKADVVTFTILIDALCKVGKVNEAFVVLDKMKEQGISPNLQTYNTLISGLLRLQR 285
            M+  G   DV T+ + +DAL K GK+ E F + ++M  +G  PN  T+N +I GL++   
Sbjct: 814  MKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNS 873

Query: 286  LDEALKLCDNMEQCGFLPNAYTYVLFIDCYGKLGEADK 399
            LD+A+ L  ++    F P  +TY   ID   KLG  ++
Sbjct: 874  LDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEE 911



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/108 (31%), Positives = 57/108 (52%)
 Frame = +1

Query: 1   MKCSSQQPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGK 180
           MK     P  VTY T++      G ++     ++ M  D    + ++F  L+D LCK G+
Sbjct: 568 MKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGE 627

Query: 181 VNEAFVVLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQ 324
           V+ A  +L +M E    P++ TYNT+I GL++  R++ A  L   M++
Sbjct: 628 VDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKK 675



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 36/122 (29%), Positives = 57/122 (46%)
 Frame = +1

Query: 34  TYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFVVLDKM 213
           TY+T+       G L         M   G   +  ++  LI  L K G   EA  V  +M
Sbjct: 159 TYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRM 218

Query: 214 KEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVLFIDCYGKLGEA 393
             +GI P+L+TY+ L+  L + + ++  + L   ME  G  PN YT+ + I   G+ G+ 
Sbjct: 219 VSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKI 278

Query: 394 DK 399
           D+
Sbjct: 279 DE 280



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
 Frame = +1

Query: 151  LIDALCKVGKVNEAFVVLDKM-KEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQC 327
            L+  LCK GK  +A+ V  K+ K   I+P+L+ YN+LI GLL+ +  + A  L   M+  
Sbjct: 758  LVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNA 817

Query: 328  GFLPNAYTYVLFIDCYGKLGE 390
            G  P+ +TY LF+D  GK G+
Sbjct: 818  GCTPDVFTYNLFLDALGKSGK 838


>ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545362|gb|EEF46867.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1113

 Score =  185 bits (469), Expect = 4e-45
 Identities = 88/133 (66%), Positives = 107/133 (80%)
 Frame = +1

Query: 1   MKCSSQQPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGK 180
           MK SS +PDRVTYITM+DKFSD GDL  V+EFW  ME DG+  DV+TFTIL++ALCK G 
Sbjct: 325 MKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGN 384

Query: 181 VNEAFVVLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVL 360
           ++EAF +LD M++QG+ PNL TYNTLISGLLR+ RLD+AL L +NME  G +P AYTY+L
Sbjct: 385 IDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYIL 444

Query: 361 FIDCYGKLGEADK 399
           FID YGK G +DK
Sbjct: 445 FIDFYGKSGRSDK 457



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 43/132 (32%), Positives = 72/132 (54%)
 Frame = +1

Query: 1   MKCSSQQPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGK 180
           +K +   PD VTY  MM  +S  G ++   E    M  +  + D++    LI+ L K G+
Sbjct: 500 LKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGR 559

Query: 181 VNEAFVVLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVL 360
           V+EA+ +  ++K+  ++P + TYNTLI+GL +  ++  A++L  +M   G  PN  T+  
Sbjct: 560 VDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNT 619

Query: 361 FIDCYGKLGEAD 396
            +DC  K  E D
Sbjct: 620 ILDCLCKNDEVD 631



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 40/130 (30%), Positives = 74/130 (56%), Gaps = 3/130 (2%)
 Frame = +1

Query: 19   QPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFV 198
            +P+   Y  +++ F   GD+ +  E ++ M  +G + D+ ++T L+  LC+ G+V++A  
Sbjct: 927  RPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALH 986

Query: 199  VLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTY---VLFID 369
              +K+K+ G+  +   YN +I GL R  R++EAL L D M+  G  P+ +TY   +L + 
Sbjct: 987  YFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLG 1046

Query: 370  CYGKLGEADK 399
              G + +A K
Sbjct: 1047 VAGMVEQAGK 1056



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/124 (29%), Positives = 65/124 (52%)
 Frame = +1

Query: 19  QPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFV 198
           +P   T+  +M       D E+V+     ME  G K ++ T+TI I  L + G+++EA  
Sbjct: 226 KPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACR 285

Query: 199 VLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVLFIDCYG 378
           ++ +M++ G  P++ TY  LI  L    +LD+A++L   M+     P+  TY+  +D + 
Sbjct: 286 IMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFS 345

Query: 379 KLGE 390
             G+
Sbjct: 346 DCGD 349



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/126 (27%), Positives = 69/126 (54%)
 Frame = +1

Query: 19   QPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFV 198
            +PD  +Y +++    + G ++    ++  ++  G   D + + ++ID L +  ++ EA  
Sbjct: 962  RPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALT 1021

Query: 199  VLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVLFIDCYG 378
            + D+M+ +GI+P+L TYN+LI  L     +++A KL + ++  G  PN +TY   I  Y 
Sbjct: 1022 LYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYS 1081

Query: 379  KLGEAD 396
              G +D
Sbjct: 1082 MSGNSD 1087



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 36/126 (28%), Positives = 63/126 (50%)
 Frame = +1

Query: 22  PDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFVV 201
           P+  TY T++        L+   + +  ME  G      T+ + ID   K G+ ++A   
Sbjct: 402 PNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALET 461

Query: 202 LDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVLFIDCYGK 381
            +KMK +GI+PN+   N  +  L  + RL EA  + + ++  G  P++ TY + + CY K
Sbjct: 462 FEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSK 521

Query: 382 LGEADK 399
            G+ D+
Sbjct: 522 AGQVDE 527



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 39/132 (29%), Positives = 63/132 (47%)
 Frame = +1

Query: 1    MKCSSQQPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGK 180
            MK +   PD  TY  ++D     G +  + E +  M     K + +T  I+I  L K   
Sbjct: 816  MKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNS 875

Query: 181  VNEAFVVLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVL 360
            +++A  +   +     SP   TY  L+ GLL+  RL+EA +L + M   G  PN   Y +
Sbjct: 876  LDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNI 935

Query: 361  FIDCYGKLGEAD 396
             I+ +GK G+ +
Sbjct: 936  LINGFGKTGDVN 947



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 37/120 (30%), Positives = 61/120 (50%)
 Frame = +1

Query: 22   PDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFVV 201
            P   TY  ++D     G LE  +E +  M   G + +   + ILI+   K G VN A  +
Sbjct: 893  PTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACEL 952

Query: 202  LDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVLFIDCYGK 381
              +M  +GI P+L++Y +L+  L    R+D+AL   + ++Q G   ++  Y L ID  G+
Sbjct: 953  FKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGR 1012



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/102 (34%), Positives = 52/102 (50%)
 Frame = +1

Query: 91  EFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFVVLDKMKEQGISPNLQTYNTLISGL 270
           E +R M L+G K  + TF+ L+ A  K         +L++M+  G+ PN+ TY   I  L
Sbjct: 215 EMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVL 274

Query: 271 LRLQRLDEALKLCDNMEQCGFLPNAYTYVLFIDCYGKLGEAD 396
            R  R+DEA ++   ME  G  P+  TY + ID     G+ D
Sbjct: 275 GRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLD 316



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/126 (24%), Positives = 64/126 (50%)
 Frame = +1

Query: 22  PDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFVV 201
           P   TYI  +D +   G  +   E +  M++ G   ++V     + +L ++G++ EA V+
Sbjct: 437 PTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVI 496

Query: 202 LDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVLFIDCYGK 381
            +++K  G++P+  TYN ++    +  ++DEA++L  +M +    P+       I+   K
Sbjct: 497 FNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYK 556

Query: 382 LGEADK 399
            G  D+
Sbjct: 557 AGRVDE 562



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 9/127 (7%)
 Frame = +1

Query: 22  PDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFVV 201
           P  VTY T++      G ++   E +  M  +G   + +TF  ++D LCK  +V+ A  +
Sbjct: 577 PTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKM 636

Query: 202 LDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQ---------CGFLPNAYTY 354
           L KM      P++ T+NT+I GL+  +R+ +A+ L   M++         C  LP     
Sbjct: 637 LYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKMLTPDCVTLCTLLPGVVKN 696

Query: 355 VLFIDCY 375
            L  D +
Sbjct: 697 GLMEDAF 703



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 37/127 (29%), Positives = 63/127 (49%)
 Frame = +1

Query: 19   QPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFV 198
            +P   +Y  +++ F    + E     +  M+  G   DV T+ +L+DA  K GK+NE F 
Sbjct: 787  KPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFE 846

Query: 199  VLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVLFIDCYG 378
            + ++M      PN  T+N +I+ L++   LD+AL L  ++    F P   TY   +D   
Sbjct: 847  LYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLL 906

Query: 379  KLGEADK 399
            K G  ++
Sbjct: 907  KSGRLEE 913



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 33/132 (25%), Positives = 61/132 (46%)
 Frame = +1

Query: 1    MKCSSQQPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGK 180
            M CSS +P+ +T+  ++        L+   + +  +          T+  L+D L K G+
Sbjct: 851  MICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGR 910

Query: 181  VNEAFVVLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVL 360
            + EA  + ++M + G  PN   YN LI+G  +   ++ A +L   M + G  P+  +Y  
Sbjct: 911  LEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTS 970

Query: 361  FIDCYGKLGEAD 396
             + C  + G  D
Sbjct: 971  LVGCLCEAGRVD 982


>ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  177 bits (449), Expect = 8e-43
 Identities = 85/133 (63%), Positives = 107/133 (80%)
 Frame = +1

Query: 1   MKCSSQQPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGK 180
           M+ SS +PD VTYIT+M KF ++GDLE+V+ FW  ME DG+  DVVT+TIL++ALCK GK
Sbjct: 323 MRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGK 382

Query: 181 VNEAFVVLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVL 360
           V++AF +LD M+ +GI PNL TYNTLISGLL L+RLDEAL+L +NME  G  P AY+YVL
Sbjct: 383 VDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVL 442

Query: 361 FIDCYGKLGEADK 399
           FID YGKLG+ +K
Sbjct: 443 FIDYYGKLGDPEK 455



 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 43/125 (34%), Positives = 70/125 (56%)
 Frame = +1

Query: 22  PDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFVV 201
           PD VTY  MM  +S  G ++   +    M  +G + D++    LID L K G+V+EA+ +
Sbjct: 505 PDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQM 564

Query: 202 LDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVLFIDCYGK 381
             ++K+  ++P + TYN LI+GL +  +L +AL L  +M++ G  PN  T+   +DC  K
Sbjct: 565 FGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCK 624

Query: 382 LGEAD 396
               D
Sbjct: 625 NDAVD 629



 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 38/127 (29%), Positives = 72/127 (56%)
 Frame = +1

Query: 19   QPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFV 198
            +P+   Y  +++ F   G++    + ++ M  +G + D+ ++TIL++ L   G+V++A  
Sbjct: 925  KPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVH 984

Query: 199  VLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVLFIDCYG 378
              +++K  G+ P+  +YN +I+GL + +RL+EAL L   M+  G  P  YTY   I  +G
Sbjct: 985  YFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFG 1044

Query: 379  KLGEADK 399
              G  D+
Sbjct: 1045 NAGMVDQ 1051



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 41/133 (30%), Positives = 67/133 (50%)
 Frame = +1

Query: 1   MKCSSQQPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGK 180
           M+    +P+  TY   +      G ++      + ME +G   DVVT+T+LIDALC  GK
Sbjct: 253 METLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGK 312

Query: 181 VNEAFVVLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVL 360
           +++A  +  KM+     P+L TY TL+S       L+   +    ME  G+ P+  TY +
Sbjct: 313 LDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTI 372

Query: 361 FIDCYGKLGEADK 399
            ++   K G+ D+
Sbjct: 373 LVEALCKSGKVDQ 385



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/127 (29%), Positives = 67/127 (52%)
 Frame = +1

Query: 19   QPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFV 198
            +PD  +Y  +++     G ++    ++  ++L G   D V++ ++I+ L K  ++ EA  
Sbjct: 960  RPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALS 1019

Query: 199  VLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVLFIDCYG 378
            +  +MK +GISP L TYN LI        +D+A K+ + ++  G  PN +TY   I  + 
Sbjct: 1020 LFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHS 1079

Query: 379  KLGEADK 399
            K G  D+
Sbjct: 1080 KSGNKDR 1086



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/126 (28%), Positives = 64/126 (50%)
 Frame = +1

Query: 22  PDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFVV 201
           P+  TY T++    +   L+   E +  ME  G      ++ + ID   K+G   +A   
Sbjct: 400 PNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDT 459

Query: 202 LDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVLFIDCYGK 381
            +KMK++GI P++   N  +  L  + R+ EA  + +++  CG  P++ TY + + CY K
Sbjct: 460 FEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSK 519

Query: 382 LGEADK 399
            G+ DK
Sbjct: 520 AGQIDK 525



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 34/126 (26%), Positives = 64/126 (50%)
 Frame = +1

Query: 19  QPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFV 198
           +P   TY  +M       D  ++ +    ME  G + ++ T+TI I  L + G++++A+ 
Sbjct: 224 KPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYG 283

Query: 199 VLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVLFIDCYG 378
           +L  M+++G  P++ TY  LI  L    +LD+A +L   M      P+  TY+  +  +G
Sbjct: 284 ILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFG 343

Query: 379 KLGEAD 396
             G+ +
Sbjct: 344 NYGDLE 349



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 39/132 (29%), Positives = 65/132 (49%)
 Frame = +1

Query: 1    MKCSSQQPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGK 180
            MK +   P+  TY  ++D       ++ + E +  M   G K +++T  I+I AL K   
Sbjct: 814  MKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNS 873

Query: 181  VNEAFVVLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVL 360
            +N+A  +  ++     SP   TY  LI GLL+  R +EA+K+ + M      PN   Y +
Sbjct: 874  INKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNI 933

Query: 361  FIDCYGKLGEAD 396
             I+ +GK G  +
Sbjct: 934  LINGFGKAGNVN 945



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/121 (28%), Positives = 55/121 (45%)
 Frame = +1

Query: 34  TYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFVVLDKM 213
           TY+T+    S  G +         M   G   +  ++  LI  L + G   EA  V  +M
Sbjct: 159 TYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRM 218

Query: 214 KEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVLFIDCYGKLGEA 393
             +G+ P+++TY+ L+  L R +     + L + ME  G  PN YTY + I   G+ G  
Sbjct: 219 ISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRI 278

Query: 394 D 396
           D
Sbjct: 279 D 279



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
 Frame = +1

Query: 19  QPDRVTYITMMDKFSDHGDL-ESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAF 195
           +PD +   +++D     G + E+ + F RL +L      VVT+ ILI  L K GK+ +A 
Sbjct: 539 EPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLK-LAPTVVTYNILITGLGKEGKLLKAL 597

Query: 196 VVLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVLFIDCY 375
            +   MKE G  PN  T+N L+  L +   +D ALK+   M      P+  TY   I  Y
Sbjct: 598 DLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTII--Y 655

Query: 376 GKLGE 390
           G + E
Sbjct: 656 GLIKE 660


>ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata] gi|297315145|gb|EFH45568.1| hypothetical protein
           ARALYDRAFT_491552 [Arabidopsis lyrata subsp. lyrata]
          Length = 1114

 Score =  176 bits (446), Expect = 2e-42
 Identities = 83/131 (63%), Positives = 101/131 (77%)
 Frame = +1

Query: 1   MKCSSQQPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGK 180
           MK    +PDRVTYIT++D+FSD+ DL+SV +FW  ME DGH  DVVTFTIL+DALCK G 
Sbjct: 321 MKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGN 380

Query: 181 VNEAFVVLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVL 360
             EAF  LD M++QGI PNL TYNTLI GLLR+ RLD+AL++ DNME  G  P AYTY++
Sbjct: 381 FGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIV 440

Query: 361 FIDCYGKLGEA 393
           FID YGK G++
Sbjct: 441 FIDYYGKSGDS 451



 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 42/131 (32%), Positives = 78/131 (59%), Gaps = 4/131 (3%)
 Frame = +1

Query: 19   QPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFV 198
            +P+   Y  +++ F   G+ ++    ++ M  +G + D+ T+++L+D LC VG+V+E   
Sbjct: 925  RPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLH 984

Query: 199  VLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQC-GFLPNAYTY---VLFI 366
               ++KE G++P++  YN +I+GL +  RL+EAL L + M++  G  P+ YTY   +L +
Sbjct: 985  YFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNL 1044

Query: 367  DCYGKLGEADK 399
               G + EA K
Sbjct: 1045 GIAGMVEEAGK 1055



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 43/123 (34%), Positives = 68/123 (55%)
 Frame = +1

Query: 22  PDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFVV 201
           PD VTY  MM  +S  G+++   +    M  +  + DV+    LI+ L K  +V+EA+ +
Sbjct: 503 PDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKM 562

Query: 202 LDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVLFIDCYGK 381
             +MKE  + P + TYNTL++GL +  ++ EA++L + M Q G  PN  T+    DC  K
Sbjct: 563 FMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCK 622

Query: 382 LGE 390
             E
Sbjct: 623 NDE 625



 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 42/126 (33%), Positives = 67/126 (53%)
 Frame = +1

Query: 19  QPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFV 198
           +P   TY ++M       D+ESV    + ME  G K +V TFTI I  L + GK+NEA+ 
Sbjct: 222 RPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYE 281

Query: 199 VLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVLFIDCYG 378
           +L +M ++G  P++ TY  LI  L   ++LD A ++   M+     P+  TY+  +D + 
Sbjct: 282 ILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFS 341

Query: 379 KLGEAD 396
              + D
Sbjct: 342 DNRDLD 347



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 39/127 (30%), Positives = 73/127 (57%), Gaps = 1/127 (0%)
 Frame = +1

Query: 19   QPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFV 198
            +PD  TY  ++D     G ++    ++R ++  G   DVV + ++I+ L K  ++ EA V
Sbjct: 960  RPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALV 1019

Query: 199  VLDKMKE-QGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVLFIDCY 375
            + ++MK+ +GI+P+L TYN+LI  L     ++EA K+ + +++ G  PN +T+   I  Y
Sbjct: 1020 LFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGY 1079

Query: 376  GKLGEAD 396
               G+ +
Sbjct: 1080 SLSGKPE 1086



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 38/126 (30%), Positives = 62/126 (49%)
 Frame = +1

Query: 22  PDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFVV 201
           P+  TY T++        L+   E +  ME  G K    T+ + ID   K G    A   
Sbjct: 398 PNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALET 457

Query: 202 LDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVLFIDCYGK 381
            +KMK +GI+PN+   N  +  L +  R  EA ++   ++  G +P++ TY + + CY K
Sbjct: 458 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 517

Query: 382 LGEADK 399
           +GE D+
Sbjct: 518 VGEIDE 523



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
 Frame = +1

Query: 19   QPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFV 198
            QP   TY  ++    +   +E  ++ +  ++  G   DV T+  L+DA  K GK++E F 
Sbjct: 784  QPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFE 843

Query: 199  VLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKL-CDNMEQCGFLPNAYTYVLFIDCY 375
            +  +M      PN  T+N +ISGL++   +D+AL L  D M    F P A TY   ID  
Sbjct: 844  IYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGL 903

Query: 376  GKLG 387
             K G
Sbjct: 904  SKSG 907



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 39/129 (30%), Positives = 62/129 (48%)
 Frame = +1

Query: 1   MKCSSQQPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGK 180
           M+    +P+  T+   +      G +    E  + M+ +G   DVVT+T+LIDALC   K
Sbjct: 251 METLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARK 310

Query: 181 VNEAFVVLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVL 360
           ++ A  V  KMK     P+  TY TL+      + LD   +    ME+ G +P+  T+ +
Sbjct: 311 LDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTI 370

Query: 361 FIDCYGKLG 387
            +D   K G
Sbjct: 371 LVDALCKAG 379



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
 Frame = +1

Query: 1   MKCSSQQPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGK 180
           MK    +P  VTY T++     +G ++   E +  M   G   + +TF  L D LCK  +
Sbjct: 566 MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDE 625

Query: 181 VNEAFVVLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQ---------CGF 333
           V  A  +L KM + G  P++ TYNT+I GL++  ++ EA+     M++         C  
Sbjct: 626 VTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTL 685

Query: 334 LPNAYTYVLFIDCY 375
           LP      L  D Y
Sbjct: 686 LPGVVKAGLIEDAY 699



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/120 (28%), Positives = 61/120 (50%)
 Frame = +1

Query: 22   PDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFVV 201
            P   TY  ++D  S  G L   ++ +  M   G + +   + ILI+   K G+ + A  +
Sbjct: 891  PTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACAL 950

Query: 202  LDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVLFIDCYGK 381
              +M ++G+ P+L+TY+ L+  L  + R+DE L     +++ G  P+   Y L I+  GK
Sbjct: 951  FKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGK 1010



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 38/125 (30%), Positives = 59/125 (47%)
 Frame = +1

Query: 25  DRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFVVL 204
           D  TY+T+    S  G L       R M   G   +  ++  LI  L K     EA  V 
Sbjct: 154 DTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVY 213

Query: 205 DKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVLFIDCYGKL 384
            +M   G  P+LQTY++L+ GL + + ++  + L   ME  G  PN YT+ + I   G+ 
Sbjct: 214 RRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRA 273

Query: 385 GEADK 399
           G+ ++
Sbjct: 274 GKINE 278



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 1/134 (0%)
 Frame = +1

Query: 1    MKCSSQQPDRVTYITMMDKFSDHGDLESVRE-FWRLMELDGHKADVVTFTILIDALCKVG 177
            M     +P+ +T+  ++      G+++   + ++ LM          T+  LID L K G
Sbjct: 848  MSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSG 907

Query: 178  KVNEAFVVLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYV 357
            ++ EA  + + M + G  PN   YN LI+G  +    D A  L   M + G  P+  TY 
Sbjct: 908  RLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYS 967

Query: 358  LFIDCYGKLGEADK 399
            + +DC   +G  D+
Sbjct: 968  VLVDCLCMVGRVDE 981



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 32/92 (34%), Positives = 50/92 (54%)
 Frame = +1

Query: 79  ESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFVVLDKMKEQGISPNLQTYNTL 258
           E+ + F R+ E+   K  VVT+  L+  L K GK+ EA  + + M ++G  PN  T+NTL
Sbjct: 558 EAWKMFMRMKEMK-LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 616

Query: 259 ISGLLRLQRLDEALKLCDNMEQCGFLPNAYTY 354
              L +   +  ALK+   M   G +P+ +TY
Sbjct: 617 FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTY 648


>ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
           gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
           gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis
           thaliana] gi|7270088|emb|CAB79903.1| putative protein
           [Arabidopsis thaliana] gi|332660567|gb|AEE85967.1|
           proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  174 bits (442), Expect = 5e-42
 Identities = 83/131 (63%), Positives = 101/131 (77%)
 Frame = +1

Query: 1   MKCSSQQPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGK 180
           MK    +PDRVTYIT++D+FSD+ DL+SV++FW  ME DGH  DVVTFTIL+DALCK G 
Sbjct: 319 MKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGN 378

Query: 181 VNEAFVVLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVL 360
             EAF  LD M++QGI PNL TYNTLI GLLR+ RLD+AL+L  NME  G  P AYTY++
Sbjct: 379 FGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIV 438

Query: 361 FIDCYGKLGEA 393
           FID YGK G++
Sbjct: 439 FIDYYGKSGDS 449



 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 44/123 (35%), Positives = 69/123 (56%)
 Frame = +1

Query: 22  PDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFVV 201
           PD VTY  MM  +S  G+++   +    M  +G + DV+    LI+ L K  +V+EA+ +
Sbjct: 501 PDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKM 560

Query: 202 LDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVLFIDCYGK 381
             +MKE  + P + TYNTL++GL +  ++ EA++L + M Q G  PN  T+    DC  K
Sbjct: 561 FMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCK 620

Query: 382 LGE 390
             E
Sbjct: 621 NDE 623



 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 42/131 (32%), Positives = 77/131 (58%), Gaps = 4/131 (3%)
 Frame = +1

Query: 19   QPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFV 198
            +P+   Y  +++ F   G+ ++    ++ M  +G + D+ T+++L+D LC VG+V+E   
Sbjct: 923  RPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLH 982

Query: 199  VLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQC-GFLPNAYTY---VLFI 366
               ++KE G++P++  YN +I+GL +  RL+EAL L + M+   G  P+ YTY   +L +
Sbjct: 983  YFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNL 1042

Query: 367  DCYGKLGEADK 399
               G + EA K
Sbjct: 1043 GIAGMVEEAGK 1053



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/126 (32%), Positives = 68/126 (53%)
 Frame = +1

Query: 19  QPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFV 198
           +P   TY ++M       D++SV    + ME  G K +V TFTI I  L + GK+NEA+ 
Sbjct: 220 RPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYE 279

Query: 199 VLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVLFIDCYG 378
           +L +M ++G  P++ TY  LI  L   ++LD A ++ + M+     P+  TY+  +D + 
Sbjct: 280 ILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFS 339

Query: 379 KLGEAD 396
              + D
Sbjct: 340 DNRDLD 345



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/127 (29%), Positives = 72/127 (56%), Gaps = 1/127 (0%)
 Frame = +1

Query: 19   QPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFV 198
            +PD  TY  ++D     G ++    +++ ++  G   DVV + ++I+ L K  ++ EA V
Sbjct: 958  RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALV 1017

Query: 199  VLDKMK-EQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVLFIDCY 375
            + ++MK  +GI+P+L TYN+LI  L     ++EA K+ + +++ G  PN +T+   I  Y
Sbjct: 1018 LFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGY 1077

Query: 376  GKLGEAD 396
               G+ +
Sbjct: 1078 SLSGKPE 1084



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 39/129 (30%), Positives = 63/129 (48%)
 Frame = +1

Query: 1   MKCSSQQPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGK 180
           M+    +P+  T+   +      G +    E  + M+ +G   DVVT+T+LIDALC   K
Sbjct: 249 METLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARK 308

Query: 181 VNEAFVVLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVL 360
           ++ A  V +KMK     P+  TY TL+      + LD   +    ME+ G +P+  T+ +
Sbjct: 309 LDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTI 368

Query: 361 FIDCYGKLG 387
            +D   K G
Sbjct: 369 LVDALCKAG 377



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 39/125 (31%), Positives = 61/125 (48%)
 Frame = +1

Query: 25  DRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFVVL 204
           D  TY+T+    S  G L+      R M   G   +  ++  LI  L K     EA  V 
Sbjct: 152 DTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVY 211

Query: 205 DKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVLFIDCYGKL 384
            +M  +G  P+LQTY++L+ GL + + +D  + L   ME  G  PN YT+ + I   G+ 
Sbjct: 212 RRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRA 271

Query: 385 GEADK 399
           G+ ++
Sbjct: 272 GKINE 276



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 38/126 (30%), Positives = 62/126 (49%)
 Frame = +1

Query: 22  PDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFVV 201
           P+  TY T++        L+   E +  ME  G K    T+ + ID   K G    A   
Sbjct: 396 PNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALET 455

Query: 202 LDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVLFIDCYGK 381
            +KMK +GI+PN+   N  +  L +  R  EA ++   ++  G +P++ TY + + CY K
Sbjct: 456 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 515

Query: 382 LGEADK 399
           +GE D+
Sbjct: 516 VGEIDE 521



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
 Frame = +1

Query: 1   MKCSSQQPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGK 180
           MK    +P  VTY T++     +G ++   E +  M   G   + +TF  L D LCK  +
Sbjct: 564 MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDE 623

Query: 181 VNEAFVVLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQ---------CGF 333
           V  A  +L KM + G  P++ TYNT+I GL++  ++ EA+     M++         C  
Sbjct: 624 VTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTL 683

Query: 334 LPNAYTYVLFIDCY 375
           LP      L  D Y
Sbjct: 684 LPGVVKASLIEDAY 697



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/120 (28%), Positives = 61/120 (50%)
 Frame = +1

Query: 22   PDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFVV 201
            P   TY  ++D  S  G L   ++ +  M   G + +   + ILI+   K G+ + A  +
Sbjct: 889  PTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACAL 948

Query: 202  LDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVLFIDCYGK 381
              +M ++G+ P+L+TY+ L+  L  + R+DE L     +++ G  P+   Y L I+  GK
Sbjct: 949  FKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGK 1008



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
 Frame = +1

Query: 19   QPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFV 198
            QP   TY  ++    +   +E  ++ +  ++  G   DV T+  L+DA  K GK++E F 
Sbjct: 782  QPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFE 841

Query: 199  VLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKL-CDNMEQCGFLPNAYTYVLFIDCY 375
            +  +M       N  T+N +ISGL++   +D+AL L  D M    F P A TY   ID  
Sbjct: 842  LYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGL 901

Query: 376  GKLG 387
             K G
Sbjct: 902  SKSG 905



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/133 (26%), Positives = 61/133 (45%)
 Frame = +1

Query: 1   MKCSSQQPDRVTYITMMDKFSDHGDLESVREFWRLMELDGHKADVVTFTILIDALCKVGK 180
           M+    +P   TYI  +D +   GD  S  E +  M+  G   ++V     + +L K G+
Sbjct: 424 MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGR 483

Query: 181 VNEAFVVLDKMKEQGISPNLQTYNTLISGLLRLQRLDEALKLCDNMEQCGFLPNAYTYVL 360
             EA  +   +K+ G+ P+  TYN ++    ++  +DEA+KL   M + G  P+      
Sbjct: 484 DREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNS 543

Query: 361 FIDCYGKLGEADK 399
            I+   K    D+
Sbjct: 544 LINTLYKADRVDE 556



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 32/92 (34%), Positives = 50/92 (54%)
 Frame = +1

Query: 79  ESVREFWRLMELDGHKADVVTFTILIDALCKVGKVNEAFVVLDKMKEQGISPNLQTYNTL 258
           E+ + F R+ E+   K  VVT+  L+  L K GK+ EA  + + M ++G  PN  T+NTL
Sbjct: 556 EAWKMFMRMKEMK-LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 614

Query: 259 ISGLLRLQRLDEALKLCDNMEQCGFLPNAYTY 354
              L +   +  ALK+   M   G +P+ +TY
Sbjct: 615 FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTY 646