BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00027858
         (801 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001189933.1| Rad54-like protein [Arabidopsis thaliana] gi...   373   e-101
ref|NP_188552.3| Rad54-like protein [Arabidopsis thaliana] gi|11...   373   e-101
ref|XP_002885300.1| hypothetical protein ARALYDRAFT_479436 [Arab...   372   e-101
ref|XP_002282100.2| PREDICTED: DNA repair and recombination prot...   370   e-100
emb|CBI32424.3| unnamed protein product [Vitis vinifera]              370   e-100

>ref|NP_001189933.1| Rad54-like protein [Arabidopsis thaliana] gi|332642688|gb|AEE76209.1|
            Rad54-like protein [Arabidopsis thaliana]
          Length = 908

 Score =  373 bits (957), Expect = e-101
 Identities = 191/271 (70%), Positives = 210/271 (77%), Gaps = 5/271 (1%)
 Frame = -2

Query: 800  PPAMFSGRSGSWTGGDGAWVELSGKMHVXXXXXXXXXXRTDDRIVLVSNYTQTLDLFAQL 621
            P  MFSGRSG+WTGGDGAWVELSGKMHV          +TDDRIVLVSNYTQTLDLFAQL
Sbjct: 509  PAEMFSGRSGAWTGGDGAWVELSGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQL 568

Query: 620  CRERRYPFLRLDGTTSISKRQKLVNQFNDPSKDEFAFLLSSKAXXXXXXXXXXXXXXLFD 441
            CRERRYPFLRLDG+T+ISKRQKLVN+ NDP+KDEFAFLLSSKA              LFD
Sbjct: 569  CRERRYPFLRLDGSTTISKRQKLVNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFD 628

Query: 440  PDWNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEHVD- 264
            PDWNPANDKQAAARVWRDGQKKRVY+YRFLSTGTIEEKVYQRQMSKEGLQKVIQ E  D 
Sbjct: 629  PDWNPANDKQAAARVWRDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGLQKVIQHEQTDN 688

Query: 263  -SEKGNLLSTEDLRDLFTFHEKTSSEIHEKMCCDRCRQHEMMSNNILDPDSIN---GICQ 96
             + +GNLLSTEDLRDLF+FH    SEIHEKM C RC+     + NI + +  N     CQ
Sbjct: 689  STRQGNLLSTEDLRDLFSFHGDVRSEIHEKMSCSRCQNDASGTENIEEGNENNVDDNACQ 748

Query: 95   PDEEDVGGFAGLSGCLNNLKSHEKQVGTPKE 3
             D+ED+GGFA  +GC N LK+ E+QVGTP E
Sbjct: 749  IDQEDIGGFAKDAGCFNLLKNSERQVGTPLE 779


>ref|NP_188552.3| Rad54-like protein [Arabidopsis thaliana]
            gi|112419506|dbj|BAF03042.1| Rad54 [Arabidopsis thaliana]
            gi|116518260|gb|ABJ99465.1| RAD54-like protein
            [Arabidopsis thaliana] gi|332642687|gb|AEE76208.1|
            Rad54-like protein [Arabidopsis thaliana]
          Length = 910

 Score =  373 bits (957), Expect = e-101
 Identities = 191/271 (70%), Positives = 210/271 (77%), Gaps = 5/271 (1%)
 Frame = -2

Query: 800  PPAMFSGRSGSWTGGDGAWVELSGKMHVXXXXXXXXXXRTDDRIVLVSNYTQTLDLFAQL 621
            P  MFSGRSG+WTGGDGAWVELSGKMHV          +TDDRIVLVSNYTQTLDLFAQL
Sbjct: 511  PAEMFSGRSGAWTGGDGAWVELSGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQL 570

Query: 620  CRERRYPFLRLDGTTSISKRQKLVNQFNDPSKDEFAFLLSSKAXXXXXXXXXXXXXXLFD 441
            CRERRYPFLRLDG+T+ISKRQKLVN+ NDP+KDEFAFLLSSKA              LFD
Sbjct: 571  CRERRYPFLRLDGSTTISKRQKLVNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFD 630

Query: 440  PDWNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEHVD- 264
            PDWNPANDKQAAARVWRDGQKKRVY+YRFLSTGTIEEKVYQRQMSKEGLQKVIQ E  D 
Sbjct: 631  PDWNPANDKQAAARVWRDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGLQKVIQHEQTDN 690

Query: 263  -SEKGNLLSTEDLRDLFTFHEKTSSEIHEKMCCDRCRQHEMMSNNILDPDSIN---GICQ 96
             + +GNLLSTEDLRDLF+FH    SEIHEKM C RC+     + NI + +  N     CQ
Sbjct: 691  STRQGNLLSTEDLRDLFSFHGDVRSEIHEKMSCSRCQNDASGTENIEEGNENNVDDNACQ 750

Query: 95   PDEEDVGGFAGLSGCLNNLKSHEKQVGTPKE 3
             D+ED+GGFA  +GC N LK+ E+QVGTP E
Sbjct: 751  IDQEDIGGFAKDAGCFNLLKNSERQVGTPLE 781


>ref|XP_002885300.1| hypothetical protein ARALYDRAFT_479436 [Arabidopsis lyrata subsp.
            lyrata] gi|297331140|gb|EFH61559.1| hypothetical protein
            ARALYDRAFT_479436 [Arabidopsis lyrata subsp. lyrata]
          Length = 910

 Score =  372 bits (956), Expect = e-101
 Identities = 191/271 (70%), Positives = 211/271 (77%), Gaps = 5/271 (1%)
 Frame = -2

Query: 800  PPAMFSGRSGSWTGGDGAWVELSGKMHVXXXXXXXXXXRTDDRIVLVSNYTQTLDLFAQL 621
            P  MFSGRSG+WTGGDGAWVELSGKMHV          +T+DRIVLVSNYTQTLDLFAQL
Sbjct: 511  PAEMFSGRSGAWTGGDGAWVELSGKMHVLSRLLANLRRKTNDRIVLVSNYTQTLDLFAQL 570

Query: 620  CRERRYPFLRLDGTTSISKRQKLVNQFNDPSKDEFAFLLSSKAXXXXXXXXXXXXXXLFD 441
            CRERRYPFLRLDG+T+ISKRQKLVN+ NDP+KDEFAFLLSSKA              LFD
Sbjct: 571  CRERRYPFLRLDGSTTISKRQKLVNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFD 630

Query: 440  PDWNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEHVD- 264
            PDWNPANDKQAAARVWRDGQKKRVY+YRFLSTGTIEEKVYQRQMSKEGLQKVIQ E  D 
Sbjct: 631  PDWNPANDKQAAARVWRDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGLQKVIQHEQTDN 690

Query: 263  -SEKGNLLSTEDLRDLFTFHEKTSSEIHEKMCCDRCRQHEMMSNNILDPDSIN---GICQ 96
             + +GNLLSTEDLRDLF+FH    SEIHEKM C+RC+     + NI + +  N     CQ
Sbjct: 691  NTRQGNLLSTEDLRDLFSFHGDVRSEIHEKMSCNRCQNDSAGTENIEEGNENNVDDNACQ 750

Query: 95   PDEEDVGGFAGLSGCLNNLKSHEKQVGTPKE 3
             D+ED+GGFA  +GC N LK+ EKQVGTP E
Sbjct: 751  IDQEDIGGFAKDAGCYNLLKNSEKQVGTPLE 781


>ref|XP_002282100.2| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
            vinifera]
          Length = 934

 Score =  370 bits (951), Expect = e-100
 Identities = 192/274 (70%), Positives = 213/274 (77%), Gaps = 8/274 (2%)
 Frame = -2

Query: 800  PPAMFSGRSGSWTGGDGAWVELSGKMHVXXXXXXXXXXRTDDRIVLVSNYTQTLDLFAQL 621
            PP MFSGRSG+WTGG+G WVELSGKMHV          +TDDRIVLVSNYTQTLDLFAQL
Sbjct: 513  PPEMFSGRSGAWTGGEGIWVELSGKMHVLARLLAHLRQKTDDRIVLVSNYTQTLDLFAQL 572

Query: 620  CRERRYPFLRLDGTTSISKRQKLVNQFNDPSKDEFAFLLSSKAXXXXXXXXXXXXXXLFD 441
            CRERRYP+LRLDGTTSI+KRQKLVN+F+DP KDEF FLLSSKA              LFD
Sbjct: 573  CRERRYPYLRLDGTTSINKRQKLVNRFSDPLKDEFVFLLSSKAGGCGLNLIGGNRLVLFD 632

Query: 440  PDWNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEHVDS 261
            PDWNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEEKV+QRQMSKEGLQKVIQQE  DS
Sbjct: 633  PDWNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEEKVFQRQMSKEGLQKVIQQEQKDS 692

Query: 260  EK--GNLLSTEDLRDLFTFHEKTSSEIHEKMCCDRCRQHEMMSNNILDPD---SINGICQ 96
             K  GN LSTEDLRDLF+FHE   SEIHEKM C+RC+ ++    ++ + D   S N  CQ
Sbjct: 693  LKTQGNFLSTEDLRDLFSFHENVRSEIHEKMNCNRCQNYDERPESVREEDGFESKNEGCQ 752

Query: 95   P---DEEDVGGFAGLSGCLNNLKSHEKQVGTPKE 3
                D +D+GGFAG++GCL+ LK  EKQVGT  E
Sbjct: 753  SYQMDCDDIGGFAGITGCLHKLKRSEKQVGTALE 786


>emb|CBI32424.3| unnamed protein product [Vitis vinifera]
          Length = 1112

 Score =  370 bits (951), Expect = e-100
 Identities = 192/274 (70%), Positives = 213/274 (77%), Gaps = 8/274 (2%)
 Frame = -2

Query: 800  PPAMFSGRSGSWTGGDGAWVELSGKMHVXXXXXXXXXXRTDDRIVLVSNYTQTLDLFAQL 621
            PP MFSGRSG+WTGG+G WVELSGKMHV          +TDDRIVLVSNYTQTLDLFAQL
Sbjct: 691  PPEMFSGRSGAWTGGEGIWVELSGKMHVLARLLAHLRQKTDDRIVLVSNYTQTLDLFAQL 750

Query: 620  CRERRYPFLRLDGTTSISKRQKLVNQFNDPSKDEFAFLLSSKAXXXXXXXXXXXXXXLFD 441
            CRERRYP+LRLDGTTSI+KRQKLVN+F+DP KDEF FLLSSKA              LFD
Sbjct: 751  CRERRYPYLRLDGTTSINKRQKLVNRFSDPLKDEFVFLLSSKAGGCGLNLIGGNRLVLFD 810

Query: 440  PDWNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEHVDS 261
            PDWNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEEKV+QRQMSKEGLQKVIQQE  DS
Sbjct: 811  PDWNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEEKVFQRQMSKEGLQKVIQQEQKDS 870

Query: 260  EK--GNLLSTEDLRDLFTFHEKTSSEIHEKMCCDRCRQHEMMSNNILDPD---SINGICQ 96
             K  GN LSTEDLRDLF+FHE   SEIHEKM C+RC+ ++    ++ + D   S N  CQ
Sbjct: 871  LKTQGNFLSTEDLRDLFSFHENVRSEIHEKMNCNRCQNYDERPESVREEDGFESKNEGCQ 930

Query: 95   P---DEEDVGGFAGLSGCLNNLKSHEKQVGTPKE 3
                D +D+GGFAG++GCL+ LK  EKQVGT  E
Sbjct: 931  SYQMDCDDIGGFAGITGCLHKLKRSEKQVGTALE 964