BLASTX nr result

ID: Scutellaria24_contig00027784 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00027784
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270196.1| PREDICTED: protein SENSITIVE TO PROTON RHIZO...    60   2e-07
gb|ACU17992.1| unknown [Glycine max]                                   55   5e-06
gb|ADL36633.1| C2H2L domain class transcription factor [Malus x ...    55   6e-06

>ref|XP_002270196.1| PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1 isoform 1
           [Vitis vinifera] gi|359493099|ref|XP_003634509.1|
           PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1
           isoform 2 [Vitis vinifera]
           gi|359493101|ref|XP_003634510.1| PREDICTED: protein
           SENSITIVE TO PROTON RHIZOTOXICITY 1 isoform 3 [Vitis
           vinifera] gi|147859485|emb|CAN81435.1| hypothetical
           protein VITISV_010700 [Vitis vinifera]
          Length = 527

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
 Frame = -3

Query: 273 MDPEERLCADTWTKSSS-GHESSLNTHSNSSPFSDFNKHQQKWESSSFSNYGGRVDQQFS 97
           MD ++RL  DTWT+SSS G+E   +  S ++      +HQ KWE  S  +Y  R++  F 
Sbjct: 1   MDLKDRLSVDTWTQSSSSGNELPKDQQSFTNFSLQQQQHQHKWEDPSVLDYSVRIEPAFQ 60

Query: 96  HHNRPFGVENSLACNLNNQVQMDDHLGKQKCE 1
             N+     +SL CN N+Q++   +L ++ C+
Sbjct: 61  EFNQTSATSSSLPCNPNSQIK---NLNREDCQ 89


>gb|ACU17992.1| unknown [Glycine max]
          Length = 185

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
 Frame = -3

Query: 273 MDPEERLCADTWTKSSS--GHESSLNTHSNSSPFSDFNKHQQKWESSSFSNYGGRVDQQF 100
           MD    L A+TW +SSS     S L++   S P      +QQKW+  S S++G R +  F
Sbjct: 1   MDSNGSLRANTWARSSSLTSPASGLSSDPLSFPGFGLQHNQQKWDVPSNSDFGIRAEAPF 60

Query: 99  SHHNRPFGVENSLACNLNNQVQMDDHLGKQKC 4
              N+P   ++ L CN NN++++    G++ C
Sbjct: 61  KEFNQPSQTQSPLPCNSNNEIEIP---GQENC 89


>gb|ADL36633.1| C2H2L domain class transcription factor [Malus x domestica]
          Length = 527

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
 Frame = -3

Query: 273 MDPEERLCADTWTKSSSGHESSLNTHSNSSPFSDFN--KHQQKWESSSFSNYGGRVDQQF 100
           MDP+ER   DTW   S+G++ +    S+   F++FN  +HQ++WE  S  +Y  R++  F
Sbjct: 1   MDPKERQW-DTWENPSTGNDVTNTISSDHPSFTNFNSQQHQREWERPSVLDYEMRMEPSF 59

Query: 99  SHHNRPFGVENSLACNLNNQVQMDDHLG 16
              ++P   + S  CN  N  ++ D  G
Sbjct: 60  LKFHQPSDSQTSYTCNSKNDTKIPDQEG 87


Top