BLASTX nr result

ID: Scutellaria24_contig00027764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00027764
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27634.3| unnamed protein product [Vitis vinifera]              176   2e-42
ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containi...   176   2e-42
ref|XP_003621545.1| Pentatricopeptide repeat-containing protein ...   173   1e-41
ref|XP_002302689.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41
ref|XP_003539071.1| PREDICTED: pentatricopeptide repeat-containi...   171   4e-41

>emb|CBI27634.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score =  176 bits (446), Expect = 2e-42
 Identities = 84/104 (80%), Positives = 98/104 (94%)
 Frame = +1

Query: 1   YLDIVMYNTLINALGKAGRIEEAVKLFQQMKSSGINPDVFSYNTLIEVHSKAGRLKDAYK 180
           YLDIVMYNTLINALGKAGRI+EA KLF+QM+SSGINPDV ++NTLIE+H+KAG+LK AYK
Sbjct: 250 YLDIVMYNTLINALGKAGRIDEATKLFEQMRSSGINPDVVTFNTLIEIHAKAGQLKAAYK 309

Query: 181 FLKMMLDAGCAPNHVTDTTLDFLEKEIEKRRYQKASIMRSNMDD 312
           FLK+MLDAGC+PNHVTDTTLDFL KEIEK RY+KASI+R++ DD
Sbjct: 310 FLKLMLDAGCSPNHVTDTTLDFLGKEIEKLRYKKASIIRTSKDD 353


>ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
           [Vitis vinifera]
          Length = 792

 Score =  176 bits (446), Expect = 2e-42
 Identities = 84/104 (80%), Positives = 98/104 (94%)
 Frame = +1

Query: 1   YLDIVMYNTLINALGKAGRIEEAVKLFQQMKSSGINPDVFSYNTLIEVHSKAGRLKDAYK 180
           YLDIVMYNTLINALGKAGRI+EA KLF+QM+SSGINPDV ++NTLIE+H+KAG+LK AYK
Sbjct: 687 YLDIVMYNTLINALGKAGRIDEATKLFEQMRSSGINPDVVTFNTLIEIHAKAGQLKAAYK 746

Query: 181 FLKMMLDAGCAPNHVTDTTLDFLEKEIEKRRYQKASIMRSNMDD 312
           FLK+MLDAGC+PNHVTDTTLDFL KEIEK RY+KASI+R++ DD
Sbjct: 747 FLKLMLDAGCSPNHVTDTTLDFLGKEIEKLRYKKASIIRTSKDD 790



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
 Frame = +1

Query: 7   DIVMYNTLINALGKAGRIEEAVKLFQQMKSSGINPDVFSYNTLIEVHSKAGRLKDAYK-F 183
           D+  YN+LI  L   G++++A+ +++++K SG  PD F+Y  LI+  SK+ R+ DA + F
Sbjct: 271 DLCTYNSLIRVLCLVGKVKDALIVWEELKGSGHEPDAFTYRILIQGCSKSYRMDDAMRIF 330

Query: 184 LKMMLDAGCAPNHVTDTTLDFLEK 255
            +M  +  C    V +T LD L K
Sbjct: 331 NEMQYNGFCPDTIVYNTLLDGLFK 354


>ref|XP_003621545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87241489|gb|ABD33347.1| Pentatricopeptide repeat
           [Medicago truncatula] gi|355496560|gb|AES77763.1|
           Pentatricopeptide repeat-containing protein [Medicago
           truncatula]
          Length = 791

 Score =  173 bits (438), Expect = 1e-41
 Identities = 85/104 (81%), Positives = 94/104 (90%)
 Frame = +1

Query: 1   YLDIVMYNTLINALGKAGRIEEAVKLFQQMKSSGINPDVFSYNTLIEVHSKAGRLKDAYK 180
           YLDIVMYNTLINALGKAGRI+E  K F+QMKSSGINPDV +YNTLIE+HSKAGRLKDAYK
Sbjct: 687 YLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEIHSKAGRLKDAYK 746

Query: 181 FLKMMLDAGCAPNHVTDTTLDFLEKEIEKRRYQKASIMRSNMDD 312
           FLKMM+DAGC PNHVTDTTLD+L +EI+K RYQKASI+ S  DD
Sbjct: 747 FLKMMIDAGCTPNHVTDTTLDYLVREIDKLRYQKASIL-SKKDD 789


>ref|XP_002302689.1| predicted protein [Populus trichocarpa] gi|222844415|gb|EEE81962.1|
           predicted protein [Populus trichocarpa]
          Length = 640

 Score =  172 bits (436), Expect = 3e-41
 Identities = 85/103 (82%), Positives = 91/103 (88%)
 Frame = +1

Query: 1   YLDIVMYNTLINALGKAGRIEEAVKLFQQMKSSGINPDVFSYNTLIEVHSKAGRLKDAYK 180
           YLDIVMYNTLI+ALGKAGRI+EA  LF+QMK SG+NPDV +YN +IEVHSK GRLKDAYK
Sbjct: 536 YLDIVMYNTLIDALGKAGRIDEANNLFEQMKISGLNPDVVTYNIMIEVHSKTGRLKDAYK 595

Query: 181 FLKMMLDAGCAPNHVTDTTLDFLEKEIEKRRYQKASIMRSNMD 309
           FLKMMLDAGC PNHVTDTTLDFL KEIEK RYQKASIMR   D
Sbjct: 596 FLKMMLDAGCLPNHVTDTTLDFLAKEIEKLRYQKASIMRQKDD 638



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/78 (35%), Positives = 48/78 (61%)
 Frame = +1

Query: 7   DIVMYNTLINALGKAGRIEEAVKLFQQMKSSGINPDVFSYNTLIEVHSKAGRLKDAYKFL 186
           D+  YN+LI+ L  AG++++AV +++++K SG  PD F+Y  LI+   K+ +++DA K  
Sbjct: 119 DLCTYNSLIHVLCLAGKVKDAVIVYEELKVSGHEPDAFTYRILIQGCCKSYQMEDATKIF 178

Query: 187 KMMLDAGCAPNHVTDTTL 240
             M   G  P+ V   +L
Sbjct: 179 SEMQYNGFLPDTVVYNSL 196


>ref|XP_003539071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g01570-like [Glycine max]
          Length = 768

 Score =  171 bits (434), Expect = 4e-41
 Identities = 85/104 (81%), Positives = 95/104 (91%)
 Frame = +1

Query: 1   YLDIVMYNTLINALGKAGRIEEAVKLFQQMKSSGINPDVFSYNTLIEVHSKAGRLKDAYK 180
           YLDIVMYNTLINALGKA RI+E  KLF+QM+SSGINPDV +YNTLIEVHSKAGRLKDAYK
Sbjct: 664 YLDIVMYNTLINALGKASRIDEVNKLFEQMRSSGINPDVVTYNTLIEVHSKAGRLKDAYK 723

Query: 181 FLKMMLDAGCAPNHVTDTTLDFLEKEIEKRRYQKASIMRSNMDD 312
           FLKMMLDAGC+PNHVTDTTLD+L +EI+K RYQ+ASI+ S  DD
Sbjct: 724 FLKMMLDAGCSPNHVTDTTLDYLGREIDKLRYQRASIL-SEKDD 766



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/71 (36%), Positives = 44/71 (61%)
 Frame = +1

Query: 7   DIVMYNTLINALGKAGRIEEAVKLFQQMKSSGINPDVFSYNTLIEVHSKAGRLKDAYKFL 186
           D   Y  LI A  K  R+E+A+++F QM+S+G  PD  +YN+L++ H KA ++ +A +  
Sbjct: 284 DRFTYTNLIQACSKTYRMEDAIRIFNQMQSNGFRPDTLAYNSLLDGHFKATKVMEACQLF 343

Query: 187 KMMLDAGCAPN 219
           + M+  G  P+
Sbjct: 344 EKMVQEGVRPS 354



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/78 (32%), Positives = 46/78 (58%)
 Frame = +1

Query: 7   DIVMYNTLINALGKAGRIEEAVKLFQQMKSSGINPDVFSYNTLIEVHSKAGRLKDAYKFL 186
           D+  YN+LI AL + G++++A+ +++++  S   PD F+Y  LI+  SK  R++DA +  
Sbjct: 249 DLCTYNSLITALCRLGKVDDAITVYEELNGSAHQPDRFTYTNLIQACSKTYRMEDAIRIF 308

Query: 187 KMMLDAGCAPNHVTDTTL 240
             M   G  P+ +   +L
Sbjct: 309 NQMQSNGFRPDTLAYNSL 326


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