BLASTX nr result

ID: Scutellaria24_contig00027728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00027728
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553805.1| PREDICTED: endoribonuclease Dicer homolog 1-...   218   3e-55
ref|XP_003520888.1| PREDICTED: endoribonuclease Dicer homolog 1-...   217   9e-55
gb|AFD22618.1| dicer-like 1 protein, partial [Nicotiana attenuata]    209   2e-52
emb|CBI38730.3| unnamed protein product [Vitis vinifera]              206   2e-51
ref|XP_002268369.1| PREDICTED: endoribonuclease Dicer homolog 1-...   206   2e-51

>ref|XP_003553805.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Glycine max]
          Length = 1942

 Score =  218 bits (556), Expect = 3e-55
 Identities = 105/127 (82%), Positives = 113/127 (88%), Gaps = 1/127 (0%)
 Frame = -1

Query: 379  AQQAVCLAACKKLHEMGAFTDMLLPDKGIDGESDKAEQNDDGDPLPGTARHREFYPEGVA 200
            AQQAVCLAACKKLHEMGAFTDMLLPDKG  GE +K EQ D+GDPLPGTARHREFYPEGVA
Sbjct: 944  AQQAVCLAACKKLHEMGAFTDMLLPDKGSGGEKEKDEQTDEGDPLPGTARHREFYPEGVA 1003

Query: 199  DTLRGEWILSGK-SCNDFNLFHLYMYAVKCENVGFSKDPLLTHVSEFAILFGNELDAEVL 23
            D L+GEWILSGK +CN+  L HLYMYAVKCEN+G SKDP LT VS FA+LFGNELDAEVL
Sbjct: 1004 DILKGEWILSGKDACNNSKLLHLYMYAVKCENLGHSKDPFLTQVSNFAVLFGNELDAEVL 1063

Query: 22   AMSMDLF 2
            +MSMDLF
Sbjct: 1064 SMSMDLF 1070


>ref|XP_003520888.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Glycine max]
          Length = 1944

 Score =  217 bits (552), Expect = 9e-55
 Identities = 104/127 (81%), Positives = 113/127 (88%), Gaps = 1/127 (0%)
 Frame = -1

Query: 379  AQQAVCLAACKKLHEMGAFTDMLLPDKGIDGESDKAEQNDDGDPLPGTARHREFYPEGVA 200
            AQQAVCLAACKKLHEMGAFTDMLLPDKG  GE +K EQ D+GDPLPGTARHREFYPEGVA
Sbjct: 946  AQQAVCLAACKKLHEMGAFTDMLLPDKGSGGEREKDEQTDEGDPLPGTARHREFYPEGVA 1005

Query: 199  DTLRGEWILSGK-SCNDFNLFHLYMYAVKCENVGFSKDPLLTHVSEFAILFGNELDAEVL 23
            D L+GEWILS K +CN++ L HLYMYAVKCEN+G SKDP LT VS FA+LFGNELDAEVL
Sbjct: 1006 DILKGEWILSEKDACNNYKLLHLYMYAVKCENLGHSKDPFLTQVSNFAVLFGNELDAEVL 1065

Query: 22   AMSMDLF 2
            +MSMDLF
Sbjct: 1066 SMSMDLF 1072


>gb|AFD22618.1| dicer-like 1 protein, partial [Nicotiana attenuata]
          Length = 1690

 Score =  209 bits (531), Expect = 2e-52
 Identities = 100/127 (78%), Positives = 111/127 (87%), Gaps = 1/127 (0%)
 Frame = -1

Query: 379  AQQAVCLAACKKLHEMGAFTDMLLPDKGIDGESDKAEQNDDGDPLPGTARHREFYPEGVA 200
            AQQAVCL ACKKLH+MGAFTDMLLPDKG   E +K EQ+D+GDP+PGT+RHREFYPEGVA
Sbjct: 687  AQQAVCLDACKKLHQMGAFTDMLLPDKGSGAELEKVEQDDEGDPIPGTSRHREFYPEGVA 746

Query: 199  DTLRGEWILSGK-SCNDFNLFHLYMYAVKCENVGFSKDPLLTHVSEFAILFGNELDAEVL 23
            D L+GEWILSGK SC+   L HLYMYA+KC N+G SKDP LT VSEFAILFGNELDAEVL
Sbjct: 747  DILKGEWILSGKDSCDSSKLVHLYMYAIKCVNIGTSKDPFLTDVSEFAILFGNELDAEVL 806

Query: 22   AMSMDLF 2
            +MSMDLF
Sbjct: 807  SMSMDLF 813


>emb|CBI38730.3| unnamed protein product [Vitis vinifera]
          Length = 1474

 Score =  206 bits (523), Expect = 2e-51
 Identities = 99/127 (77%), Positives = 108/127 (85%), Gaps = 1/127 (0%)
 Frame = -1

Query: 379  AQQAVCLAACKKLHEMGAFTDMLLPDKGIDGESDKAEQNDDGDPLPGTARHREFYPEGVA 200
            AQQAVCLAACKKLHEMGAFTDMLLPDKG   E +K +QND+GDPLPGTARHREFYPEGVA
Sbjct: 911  AQQAVCLAACKKLHEMGAFTDMLLPDKGSGEEGEKVDQNDEGDPLPGTARHREFYPEGVA 970

Query: 199  DTLRGEWILSGK-SCNDFNLFHLYMYAVKCENVGFSKDPLLTHVSEFAILFGNELDAEVL 23
            + L+GEWIL GK  CN   L HLYMYAVKC N G SKDP LT VS+F +LFGNELDAEVL
Sbjct: 971  NVLQGEWILLGKDGCNSSRLVHLYMYAVKCVNFGSSKDPFLTQVSDFVVLFGNELDAEVL 1030

Query: 22   AMSMDLF 2
            ++SMDLF
Sbjct: 1031 SISMDLF 1037


>ref|XP_002268369.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Vitis vinifera]
          Length = 1971

 Score =  206 bits (523), Expect = 2e-51
 Identities = 99/127 (77%), Positives = 108/127 (85%), Gaps = 1/127 (0%)
 Frame = -1

Query: 379  AQQAVCLAACKKLHEMGAFTDMLLPDKGIDGESDKAEQNDDGDPLPGTARHREFYPEGVA 200
            AQQAVCLAACKKLHEMGAFTDMLLPDKG   E +K +QND+GDPLPGTARHREFYPEGVA
Sbjct: 970  AQQAVCLAACKKLHEMGAFTDMLLPDKGSGEEGEKVDQNDEGDPLPGTARHREFYPEGVA 1029

Query: 199  DTLRGEWILSGK-SCNDFNLFHLYMYAVKCENVGFSKDPLLTHVSEFAILFGNELDAEVL 23
            + L+GEWIL GK  CN   L HLYMYAVKC N G SKDP LT VS+F +LFGNELDAEVL
Sbjct: 1030 NVLQGEWILLGKDGCNSSRLVHLYMYAVKCVNFGSSKDPFLTQVSDFVVLFGNELDAEVL 1089

Query: 22   AMSMDLF 2
            ++SMDLF
Sbjct: 1090 SISMDLF 1096


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