BLASTX nr result

ID: Scutellaria24_contig00027675 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00027675
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containi...   128   5e-28
emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]   128   5e-28
ref|XP_002305195.1| predicted protein [Populus trichocarpa] gi|2...   127   9e-28
ref|XP_002531188.1| pentatricopeptide repeat-containing protein,...   124   6e-27
ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containi...   122   2e-26

>ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
           mitochondrial-like [Vitis vinifera]
          Length = 547

 Score =  128 bits (321), Expect = 5e-28
 Identities = 58/100 (58%), Positives = 83/100 (83%)
 Frame = -2

Query: 305 VWGVYELMIKRRICPNEVTLRIMVSALCKEGKLGRFLSIVDWMHGKRCSVPRLIVNTCLV 126
           VW +YE MI+ R  PNEV++ +M+SALCKEG L +F+ ++D +HGKRCS P +IVNTC++
Sbjct: 210 VWKIYEHMIRVRKYPNEVSVSVMISALCKEGALQKFVDMLDRIHGKRCS-PIVIVNTCMI 268

Query: 125 YEMIEDDRIEEGLVLLKHMLHKNMILDTISYSLVIFAKVK 6
           + M+E+ R+E+G+++LK +L KNMILDTISYSL+ +AKVK
Sbjct: 269 FRMLEEGRVEQGMLILKRLLQKNMILDTISYSLIAYAKVK 308


>emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]
          Length = 642

 Score =  128 bits (321), Expect = 5e-28
 Identities = 58/100 (58%), Positives = 83/100 (83%)
 Frame = -2

Query: 305 VWGVYELMIKRRICPNEVTLRIMVSALCKEGKLGRFLSIVDWMHGKRCSVPRLIVNTCLV 126
           VW +YE MI+ R  PNEV++ +M+SALCKEG L +F+ ++D +HGKRCS P +IVNTC++
Sbjct: 210 VWKIYEHMIRVRKYPNEVSVSVMISALCKEGALQKFVDMLDRIHGKRCS-PIVIVNTCMI 268

Query: 125 YEMIEDDRIEEGLVLLKHMLHKNMILDTISYSLVIFAKVK 6
           + M+E+ R+E+G+++LK +L KNMILDTISYSL+ +AKVK
Sbjct: 269 FRMLEEGRVEQGMLILKRLLQKNMILDTISYSLIAYAKVK 308


>ref|XP_002305195.1| predicted protein [Populus trichocarpa] gi|222848159|gb|EEE85706.1|
           predicted protein [Populus trichocarpa]
          Length = 556

 Score =  127 bits (319), Expect = 9e-28
 Identities = 59/100 (59%), Positives = 80/100 (80%)
 Frame = -2

Query: 302 WGVYELMIKRRICPNEVTLRIMVSALCKEGKLGRFLSIVDWMHGKRCSVPRLIVNTCLVY 123
           W +YE M+ RR  PNE T+  M+SALCKEGKL   ++++D +HGKRCS P +IVNTCLV+
Sbjct: 218 WKIYEHMLHRRTYPNEATIESMISALCKEGKLQTIVNMLDKIHGKRCS-PVVIVNTCLVF 276

Query: 122 EMIEDDRIEEGLVLLKHMLHKNMILDTISYSLVIFAKVKM 3
            ++E+ R+E GL LLK ML KNMILDT++YSL+++AKVK+
Sbjct: 277 RILEEGRVEPGLALLKMMLRKNMILDTVAYSLIVYAKVKL 316


>ref|XP_002531188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529229|gb|EEF31203.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 619

 Score =  124 bits (312), Expect = 6e-27
 Identities = 55/101 (54%), Positives = 81/101 (80%)
 Frame = -2

Query: 305 VWGVYELMIKRRICPNEVTLRIMVSALCKEGKLGRFLSIVDWMHGKRCSVPRLIVNTCLV 126
           VW +YE MI +RI PNE T+R M++ALCKEGKL  F+ I+D +HGKRC  P +I+N C+V
Sbjct: 218 VWKIYEHMIHKRIYPNEATIRTMINALCKEGKLQMFVDILDRIHGKRCR-PLVIINACMV 276

Query: 125 YEMIEDDRIEEGLVLLKHMLHKNMILDTISYSLVIFAKVKM 3
           + ++++ R++ G+ +LK ML KNMILDT++YSL++FAKV++
Sbjct: 277 FRILQEGRVDVGIGILKGMLQKNMILDTVAYSLIVFAKVRL 317


>ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
           mitochondrial-like [Cucumis sativus]
          Length = 539

 Score =  122 bits (307), Expect = 2e-26
 Identities = 54/100 (54%), Positives = 79/100 (79%)
 Frame = -2

Query: 305 VWGVYELMIKRRICPNEVTLRIMVSALCKEGKLGRFLSIVDWMHGKRCSVPRLIVNTCLV 126
           VW +YE MI++R+ PN +T+RIM+++LCKEGKL     +++ +HG RCS   LIVN CL+
Sbjct: 213 VWKIYEQMIRKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIHGSRCSAS-LIVNACLI 271

Query: 125 YEMIEDDRIEEGLVLLKHMLHKNMILDTISYSLVIFAKVK 6
           Y ++E+ R+E+G+ LLK ML KNM+LD I+YSL+++AKVK
Sbjct: 272 YRILEEGRVEDGITLLKRMLQKNMVLDDIAYSLIVYAKVK 311


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