BLASTX nr result

ID: Scutellaria24_contig00027559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00027559
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containi...   137   7e-31
emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]   137   7e-31
ref|XP_002298874.1| predicted protein [Populus trichocarpa] gi|2...   133   2e-29
ref|XP_002522775.1| pentatricopeptide repeat-containing protein,...   128   4e-28
ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containi...   127   7e-28

>ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  137 bits (346), Expect = 7e-31
 Identities = 64/114 (56%), Positives = 86/114 (75%)
 Frame = +3

Query: 6    IFYGLKRISCFHEAHVLLHEMVRHGFVPTVKQYCRLITSMCRSGNIKGALKLRDEMEALN 185
            IF GL + S F E+ V+LHEM+ +G +P   QY  LI  MCR G+I+GA KL+DEMEAL 
Sbjct: 1656 IFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALG 1715

Query: 186  VGSHRVAESAIVRGLVRCGKTEDAVFALNYMVKSNIVPTIPTFTTLIHALCKES 347
             GSH VAESA+VRGL+ CGKTEDA+  L++M++  ++PTI TFTTL+H  C+++
Sbjct: 1716 FGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDA 1769


>emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  137 bits (346), Expect = 7e-31
 Identities = 64/114 (56%), Positives = 86/114 (75%)
 Frame = +3

Query: 6    IFYGLKRISCFHEAHVLLHEMVRHGFVPTVKQYCRLITSMCRSGNIKGALKLRDEMEALN 185
            IF GL + S F E+ V+LHEM+ +G +P   QY  LI  MCR G+I+GA KL+DEMEAL 
Sbjct: 905  IFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALG 964

Query: 186  VGSHRVAESAIVRGLVRCGKTEDAVFALNYMVKSNIVPTIPTFTTLIHALCKES 347
             GSH VAESA+VRGL+ CGKTEDA+  L++M++  ++PTI TFTTL+H  C+++
Sbjct: 965  FGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDA 1018


>ref|XP_002298874.1| predicted protein [Populus trichocarpa] gi|222846132|gb|EEE83679.1|
           predicted protein [Populus trichocarpa]
          Length = 948

 Score =  133 bits (334), Expect = 2e-29
 Identities = 61/115 (53%), Positives = 84/115 (73%)
 Frame = +3

Query: 3   SIFYGLKRISCFHEAHVLLHEMVRHGFVPTVKQYCRLITSMCRSGNIKGALKLRDEMEAL 182
           +IF GL R S   E+H+LLH+M+  G  PT  QY  LI  MCR G+I+GA +L+DEMEA+
Sbjct: 646 AIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAI 705

Query: 183 NVGSHRVAESAIVRGLVRCGKTEDAVFALNYMVKSNIVPTIPTFTTLIHALCKES 347
            V S  VAESA+VRGL +CGK E+A+  L+ M++  ++PT+ TFTTL+H LCK++
Sbjct: 706 GVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKA 760


>ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223538013|gb|EEF39626.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1071

 Score =  128 bits (322), Expect = 4e-28
 Identities = 59/113 (52%), Positives = 81/113 (71%)
 Frame = +3

Query: 3    SIFYGLKRISCFHEAHVLLHEMVRHGFVPTVKQYCRLITSMCRSGNIKGALKLRDEMEAL 182
            SI   L R+S   E+H+LLHEM+  G +P  +QY  L+  MCR G+I GA KL+DEMEAL
Sbjct: 840  SIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEAL 899

Query: 183  NVGSHRVAESAIVRGLVRCGKTEDAVFALNYMVKSNIVPTIPTFTTLIHALCK 341
             + S  VAESA+VRGL +CGK E+A   L++M++ +++PTI TFTTL+H  C+
Sbjct: 900  GISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCR 952


>ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Glycine max]
          Length = 1078

 Score =  127 bits (320), Expect = 7e-28
 Identities = 62/115 (53%), Positives = 82/115 (71%)
 Frame = +3

Query: 3    SIFYGLKRISCFHEAHVLLHEMVRHGFVPTVKQYCRLITSMCRSGNIKGALKLRDEMEAL 182
            ++F GL R S FH+AH +L  ++  G VPT KQY  LI  MCR GNIKGA+KL+DEM+ L
Sbjct: 846  ALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTL 905

Query: 183  NVGSHRVAESAIVRGLVRCGKTEDAVFALNYMVKSNIVPTIPTFTTLIHALCKES 347
             + SH VA SAIVRGL    K E+A++ L+ M++  I+PT+ TFTTL+H  CKE+
Sbjct: 906  GISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEA 960


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