BLASTX nr result

ID: Scutellaria24_contig00027536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00027536
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18867.3| unnamed protein product [Vitis vinifera]              111   5e-23
ref|XP_002284840.1| PREDICTED: pentatricopeptide repeat-containi...   111   5e-23
ref|XP_004161905.1| PREDICTED: pentatricopeptide repeat-containi...   106   2e-21
ref|XP_004139754.1| PREDICTED: pentatricopeptide repeat-containi...   106   2e-21
ref|XP_002299265.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20

>emb|CBI18867.3| unnamed protein product [Vitis vinifera]
          Length = 804

 Score =  111 bits (278), Expect = 5e-23
 Identities = 56/80 (70%), Positives = 61/80 (76%)
 Frame = -2

Query: 240 LKALGREGMKENLIEYLHVAENQFFYRSVDLGIEIYNTVLHSLVEAKENHTAIEIFKKMI 61
           LKALG EGM   L++YLHVAENQFF  +  LG  IYNTVLHSLVEAKE+H AIEIFK MI
Sbjct: 520 LKALGAEGMIRELMQYLHVAENQFFRTNTYLGTPIYNTVLHSLVEAKESHIAIEIFKNMI 579

Query: 60  SSGFSPDAATFTIMIDCCGT 1
           S     DAAT+ IMIDCC T
Sbjct: 580 SRSLPRDAATYNIMIDCCST 599


>ref|XP_002284840.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g76280-like [Vitis vinifera]
          Length = 728

 Score =  111 bits (278), Expect = 5e-23
 Identities = 56/80 (70%), Positives = 61/80 (76%)
 Frame = -2

Query: 240 LKALGREGMKENLIEYLHVAENQFFYRSVDLGIEIYNTVLHSLVEAKENHTAIEIFKKMI 61
           LKALG EGM   L++YLHVAENQFF  +  LG  IYNTVLHSLVEAKE+H AIEIFK MI
Sbjct: 444 LKALGAEGMIRELMQYLHVAENQFFRTNTYLGTPIYNTVLHSLVEAKESHIAIEIFKNMI 503

Query: 60  SSGFSPDAATFTIMIDCCGT 1
           S     DAAT+ IMIDCC T
Sbjct: 504 SRSLPRDAATYNIMIDCCST 523


>ref|XP_004161905.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g76280-like [Cucumis sativus]
          Length = 806

 Score =  106 bits (264), Expect = 2e-21
 Identities = 47/78 (60%), Positives = 62/78 (79%)
 Frame = -2

Query: 240 LKALGREGMKENLIEYLHVAENQFFYRSVDLGIEIYNTVLHSLVEAKENHTAIEIFKKMI 61
           LKALG EGMK+ +++YL++AEN F+Y +  LG+ +YNTVLH LV++KE H AIE+F  M 
Sbjct: 522 LKALGTEGMKKEVLQYLNLAENLFYYNNTSLGMPVYNTVLHFLVDSKETHMAIELFNNMK 581

Query: 60  SSGFSPDAATFTIMIDCC 7
            SGF PDAATF +M+DCC
Sbjct: 582 RSGFFPDAATFEMMLDCC 599


>ref|XP_004139754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g76280-like [Cucumis sativus]
          Length = 834

 Score =  106 bits (264), Expect = 2e-21
 Identities = 47/78 (60%), Positives = 62/78 (79%)
 Frame = -2

Query: 240 LKALGREGMKENLIEYLHVAENQFFYRSVDLGIEIYNTVLHSLVEAKENHTAIEIFKKMI 61
           LKALG EGMK+ +++YL++AEN F+Y +  LG+ +YNTVLH LV++KE H AIE+F  M 
Sbjct: 550 LKALGTEGMKKEVLQYLNLAENLFYYNNTSLGMPVYNTVLHFLVDSKETHMAIELFNNMK 609

Query: 60  SSGFSPDAATFTIMIDCC 7
            SGF PDAATF +M+DCC
Sbjct: 610 RSGFFPDAATFEMMLDCC 627


>ref|XP_002299265.1| predicted protein [Populus trichocarpa] gi|222846523|gb|EEE84070.1|
           predicted protein [Populus trichocarpa]
          Length = 705

 Score =  102 bits (253), Expect = 4e-20
 Identities = 50/80 (62%), Positives = 62/80 (77%)
 Frame = -2

Query: 240 LKALGREGMKENLIEYLHVAENQFFYRSVDLGIEIYNTVLHSLVEAKENHTAIEIFKKMI 61
           LKALG+EGM   L++YL VAE+ F++ +  LGI IYNTVLHSLVEA+E   AI +FK M 
Sbjct: 428 LKALGKEGMMRELMQYLGVAEDLFYHSNTHLGIPIYNTVLHSLVEAEECRMAIALFKHMK 487

Query: 60  SSGFSPDAATFTIMIDCCGT 1
           +SGF P+AAT+ IMIDCC T
Sbjct: 488 ASGFEPNAATYCIMIDCCRT 507


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