BLASTX nr result

ID: Scutellaria24_contig00027523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00027523
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72711.1| hypothetical protein VITISV_018097 [Vitis vinifera]   189   3e-46
ref|XP_002300148.1| predicted protein [Populus trichocarpa] gi|2...   184   9e-45
ref|XP_002266665.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair p...   183   1e-44
ref|XP_002522807.1| DNA repair protein RAD50, putative [Ricinus ...   182   2e-44
ref|XP_004171095.1| PREDICTED: DNA repair protein RAD50-like, pa...   182   2e-44

>emb|CAN72711.1| hypothetical protein VITISV_018097 [Vitis vinifera]
          Length = 244

 Score =  189 bits (479), Expect = 3e-46
 Identities = 92/104 (88%), Positives = 99/104 (95%)
 Frame = -3

Query: 315 LSYRCADMDREIPALMGVSKAVLENVIFVHQDDANWPLQDPSTLKKKFDDIFSATRYTKA 136
           LSYRCADMDREIPALMGVSKAVLENVIFVHQDDANWPLQDPSTLKKKFDDIFSATRYTKA
Sbjct: 130 LSYRCADMDREIPALMGVSKAVLENVIFVHQDDANWPLQDPSTLKKKFDDIFSATRYTKA 189

Query: 135 LEVIKKLHKDQAQEIKTYKLKLDHLQTLKDAAFKVLIVIWEIEK 4
           LEVIKKLHKDQAQEIKTYKLKL++LQ LKDAA+K  + +W +E+
Sbjct: 190 LEVIKKLHKDQAQEIKTYKLKLENLQILKDAAYKRDMTLWSLEE 233


>ref|XP_002300148.1| predicted protein [Populus trichocarpa] gi|222847406|gb|EEE84953.1|
           predicted protein [Populus trichocarpa]
          Length = 1316

 Score =  184 bits (466), Expect = 9e-45
 Identities = 89/95 (93%), Positives = 95/95 (100%)
 Frame = -3

Query: 315 LSYRCADMDREIPALMGVSKAVLENVIFVHQDDANWPLQDPSTLKKKFDDIFSATRYTKA 136
           LSYRCADMDREIPALMGVSKA+LENVIFVHQD+ANWPLQDPSTLKKKFDDIFSATRYTKA
Sbjct: 130 LSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKA 189

Query: 135 LEVIKKLHKDQAQEIKTYKLKLDHLQTLKDAAFKV 31
           LEVIKKLHKDQAQEIKTYKLKL++LQTLKDAA+K+
Sbjct: 190 LEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKL 224


>ref|XP_002266665.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein RAD50-like
           [Vitis vinifera]
          Length = 1316

 Score =  183 bits (465), Expect = 1e-44
 Identities = 90/95 (94%), Positives = 94/95 (98%)
 Frame = -3

Query: 315 LSYRCADMDREIPALMGVSKAVLENVIFVHQDDANWPLQDPSTLKKKFDDIFSATRYTKA 136
           LSYRCADMDREIPALMGVSKAVLENVIFVHQDDANWPLQDPSTLKKKFDDIFSATRYTKA
Sbjct: 130 LSYRCADMDREIPALMGVSKAVLENVIFVHQDDANWPLQDPSTLKKKFDDIFSATRYTKA 189

Query: 135 LEVIKKLHKDQAQEIKTYKLKLDHLQTLKDAAFKV 31
           LEVIKKLHKDQAQEIKTYKLKL++LQ LKDAA+K+
Sbjct: 190 LEVIKKLHKDQAQEIKTYKLKLENLQILKDAAYKL 224


>ref|XP_002522807.1| DNA repair protein RAD50, putative [Ricinus communis]
           gi|223538045|gb|EEF39658.1| DNA repair protein RAD50,
           putative [Ricinus communis]
          Length = 1256

 Score =  182 bits (463), Expect = 2e-44
 Identities = 88/95 (92%), Positives = 95/95 (100%)
 Frame = -3

Query: 315 LSYRCADMDREIPALMGVSKAVLENVIFVHQDDANWPLQDPSTLKKKFDDIFSATRYTKA 136
           LSYRCADMDREIPALMGVSKA+LENVIFVHQD+ANWPLQDPSTLKKKFDDIFSATRYTKA
Sbjct: 130 LSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKA 189

Query: 135 LEVIKKLHKDQAQEIKTYKLKLDHLQTLKDAAFKV 31
           LEVIKKLHKDQAQEIKTYKLKL++LQTLKD+A+K+
Sbjct: 190 LEVIKKLHKDQAQEIKTYKLKLENLQTLKDSAYKL 224


>ref|XP_004171095.1| PREDICTED: DNA repair protein RAD50-like, partial [Cucumis sativus]
          Length = 299

 Score =  182 bits (462), Expect = 2e-44
 Identities = 89/95 (93%), Positives = 94/95 (98%)
 Frame = -3

Query: 315 LSYRCADMDREIPALMGVSKAVLENVIFVHQDDANWPLQDPSTLKKKFDDIFSATRYTKA 136
           LSYRCADMDREIPALMGVSKAVLENVIFVHQD+ANWPLQDPSTLKKKFDDIFSATRYTKA
Sbjct: 130 LSYRCADMDREIPALMGVSKAVLENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKA 189

Query: 135 LEVIKKLHKDQAQEIKTYKLKLDHLQTLKDAAFKV 31
           LEVIKKLHKDQA EIKTYKLKL++LQTLKDAA+K+
Sbjct: 190 LEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKL 224


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