BLASTX nr result

ID: Scutellaria24_contig00027500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00027500
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26264.3| unnamed protein product [Vitis vinifera]              187   8e-46
ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containi...   187   8e-46
ref|XP_002314694.1| predicted protein [Populus trichocarpa] gi|2...   177   8e-43
ref|XP_004168898.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   174   9e-42
ref|XP_004134445.1| PREDICTED: pentatricopeptide repeat-containi...   174   9e-42

>emb|CBI26264.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  187 bits (475), Expect = 8e-46
 Identities = 88/129 (68%), Positives = 108/129 (83%)
 Frame = +2

Query: 2   WNALIGGYAHQGHAEMALELFNEMTKSRSTNHLAPNYVTFVCVLTACSRGGMVDVGMDIF 181
           WNA+IGGYAHQG A+MA+ LF+EMT    ++ +APNYVTFVCVL+ACSR G V+VGM+IF
Sbjct: 278 WNAMIGGYAHQGQADMAVTLFDEMTCG--SHRVAPNYVTFVCVLSACSRAGSVNVGMEIF 335

Query: 182 NSMKDKYGINPGAEHYACAVDMLGRAGQVERAYQIIQQMRIRPTISIWGALLNACKMHEK 361
            SM+ +YGI PGAEHYAC VD+LGRAG VE+AYQ I++M IRPT+S+WGALL A KM  K
Sbjct: 336 ESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGK 395

Query: 362 PELGKIAAE 388
            ELGK+AA+
Sbjct: 396 SELGKVAAD 404


>ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Vitis vinifera]
          Length = 684

 Score =  187 bits (475), Expect = 8e-46
 Identities = 88/129 (68%), Positives = 108/129 (83%)
 Frame = +2

Query: 2   WNALIGGYAHQGHAEMALELFNEMTKSRSTNHLAPNYVTFVCVLTACSRGGMVDVGMDIF 181
           WNA+IGGYAHQG A+MA+ LF+EMT    ++ +APNYVTFVCVL+ACSR G V+VGM+IF
Sbjct: 379 WNAMIGGYAHQGQADMAVTLFDEMTCG--SHRVAPNYVTFVCVLSACSRAGSVNVGMEIF 436

Query: 182 NSMKDKYGINPGAEHYACAVDMLGRAGQVERAYQIIQQMRIRPTISIWGALLNACKMHEK 361
            SM+ +YGI PGAEHYAC VD+LGRAG VE+AYQ I++M IRPT+S+WGALL A KM  K
Sbjct: 437 ESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGK 496

Query: 362 PELGKIAAE 388
            ELGK+AA+
Sbjct: 497 SELGKVAAD 505


>ref|XP_002314694.1| predicted protein [Populus trichocarpa] gi|222863734|gb|EEF00865.1|
           predicted protein [Populus trichocarpa]
          Length = 631

 Score =  177 bits (449), Expect = 8e-43
 Identities = 82/129 (63%), Positives = 101/129 (78%)
 Frame = +2

Query: 2   WNALIGGYAHQGHAEMALELFNEMTKSRSTNHLAPNYVTFVCVLTACSRGGMVDVGMDIF 181
           WNA+I GYAHQG  +MA+ LF EM      +    NYVT +CVL+ACSRGG V +G +IF
Sbjct: 329 WNAMISGYAHQGDVDMAMTLFEEMQ-----SEAVANYVTLICVLSACSRGGAVKLGNEIF 383

Query: 182 NSMKDKYGINPGAEHYACAVDMLGRAGQVERAYQIIQQMRIRPTISIWGALLNACKMHEK 361
            SM+D+Y I PGAEHYAC  DMLGRAG VERAY+ +Q+M IRPTIS+WGALLNAC+++ +
Sbjct: 384 ESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFVQKMPIRPTISVWGALLNACRVYGE 443

Query: 362 PELGKIAAE 388
           PELGKIAA+
Sbjct: 444 PELGKIAAD 452


>ref|XP_004168898.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g14850-like [Cucumis sativus]
          Length = 606

 Score =  174 bits (440), Expect = 9e-42
 Identities = 80/130 (61%), Positives = 98/130 (75%)
 Frame = +2

Query: 2   WNALIGGYAHQGHAEMALELFNEMTKSRSTNHLAPNYVTFVCVLTACSRGGMVDVGMDIF 181
           WNAL+GGYAHQGHA  A+ L  EMT +     + P+YV+ +C L+ACSR G +  GM IF
Sbjct: 379 WNALLGGYAHQGHANKAVALLEEMTSAAG---IVPSYVSLICALSACSRAGDLKTGMKIF 435

Query: 182 NSMKDKYGINPGAEHYACAVDMLGRAGQVERAYQIIQQMRIRPTISIWGALLNACKMHEK 361
            SMK++YG+ PG EHYAC VD+LGRAG VE AY  I++M   PTISIWGALL AC+MH K
Sbjct: 436 ESMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHGK 495

Query: 362 PELGKIAAER 391
           PELGK+AAE+
Sbjct: 496 PELGKLAAEK 505


>ref|XP_004134445.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Cucumis sativus]
          Length = 606

 Score =  174 bits (440), Expect = 9e-42
 Identities = 80/130 (61%), Positives = 98/130 (75%)
 Frame = +2

Query: 2   WNALIGGYAHQGHAEMALELFNEMTKSRSTNHLAPNYVTFVCVLTACSRGGMVDVGMDIF 181
           WNAL+GGYAHQGHA  A+ L  EMT +     + P+YV+ +C L+ACSR G +  GM IF
Sbjct: 379 WNALLGGYAHQGHANKAVALLEEMTSAAG---IVPSYVSLICALSACSRAGDLKTGMKIF 435

Query: 182 NSMKDKYGINPGAEHYACAVDMLGRAGQVERAYQIIQQMRIRPTISIWGALLNACKMHEK 361
            SMK++YG+ PG EHYAC VD+LGRAG VE AY  I++M   PTISIWGALL AC+MH K
Sbjct: 436 ESMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHGK 495

Query: 362 PELGKIAAER 391
           PELGK+AAE+
Sbjct: 496 PELGKLAAEK 505


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