BLASTX nr result

ID: Scutellaria24_contig00027485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00027485
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [...   100   2e-19
emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]   100   2e-19
ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinu...    94   9e-18
ref|XP_004158653.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex...    92   4e-17
ref|XP_004134563.1| PREDICTED: FACT complex subunit SPT16-like [...    92   4e-17

>ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1071

 Score =  100 bits (248), Expect = 2e-19
 Identities = 56/79 (70%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
 Frame = +3

Query: 3   KTQKFSVLLADTVIIGESAPEVVTSMSSKAMKDVAYSFNEDG--EDEEPVKVKSMPNVAE 176
           KTQKFSVLLAD+VI+GE  PEVVTS+SSKA+KDVAYSFNED   E+EE  KVK   N  E
Sbjct: 420 KTQKFSVLLADSVIVGEKGPEVVTSISSKAVKDVAYSFNEDDDEEEEERPKVKPEANGGE 479

Query: 177 NFSSKANLRSVNHEVSKEE 233
             SSKA LRS N E+SKEE
Sbjct: 480 AVSSKATLRSDNQEMSKEE 498


>emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]
          Length = 1019

 Score =  100 bits (248), Expect = 2e-19
 Identities = 56/79 (70%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
 Frame = +3

Query: 3   KTQKFSVLLADTVIIGESAPEVVTSMSSKAMKDVAYSFNEDG--EDEEPVKVKSMPNVAE 176
           KTQKFSVLLAD+VI+GE  PEVVTS+SSKA+KDVAYSFNED   E+EE  KVK   N  E
Sbjct: 420 KTQKFSVLLADSVIVGEKGPEVVTSISSKAVKDVAYSFNEDDDEEEEERPKVKPEANGGE 479

Query: 177 NFSSKANLRSVNHEVSKEE 233
             SSKA LRS N E+SKEE
Sbjct: 480 AVSSKATLRSDNQEMSKEE 498


>ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinus communis]
           gi|223548526|gb|EEF50017.1| FACT complex subunit SPT16,
           putative [Ricinus communis]
          Length = 1098

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 52/78 (66%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
 Frame = +3

Query: 3   KTQKFSVLLADTVIIGESAPEVVTSMSSKAMKDVAYSFNEDGEDEEPV-KVKSMPNVAEN 179
           KTQKFSVLLADTVI+GE  P+VVTS SSKA KDVAYSFNED ++EE + K +      E 
Sbjct: 418 KTQKFSVLLADTVIVGEKLPDVVTSKSSKAFKDVAYSFNEDDDEEEELSKARVEVKGGEA 477

Query: 180 FSSKANLRSVNHEVSKEE 233
             SKA LRS NHE+SKEE
Sbjct: 478 TLSKATLRSDNHEMSKEE 495


>ref|XP_004158653.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SPT16-like
           [Cucumis sativus]
          Length = 1073

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 46/77 (59%), Positives = 58/77 (75%)
 Frame = +3

Query: 3   KTQKFSVLLADTVIIGESAPEVVTSMSSKAMKDVAYSFNEDGEDEEPVKVKSMPNVAENF 182
           K Q FS+L++DTVI+G+   EV+T+ SSK+ KD+AYSFNED E+EE +KVKS  N  E  
Sbjct: 428 KNQNFSLLISDTVIVGKEKTEVLTAPSSKSFKDIAYSFNEDEEEEEKLKVKSEANGKEAV 487

Query: 183 SSKANLRSVNHEVSKEE 233
            SK  LRS NHE+SKEE
Sbjct: 488 VSKTTLRSDNHEISKEE 504


>ref|XP_004134563.1| PREDICTED: FACT complex subunit SPT16-like [Cucumis sativus]
          Length = 1073

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 46/77 (59%), Positives = 58/77 (75%)
 Frame = +3

Query: 3   KTQKFSVLLADTVIIGESAPEVVTSMSSKAMKDVAYSFNEDGEDEEPVKVKSMPNVAENF 182
           K Q FS+L++DTVI+G+   EV+T+ SSK+ KD+AYSFNED E+EE +KVKS  N  E  
Sbjct: 428 KNQNFSLLISDTVIVGKEKTEVLTAPSSKSFKDIAYSFNEDEEEEEKLKVKSEANGKEAV 487

Query: 183 SSKANLRSVNHEVSKEE 233
            SK  LRS NHE+SKEE
Sbjct: 488 VSKTTLRSDNHEISKEE 504


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