BLASTX nr result

ID: Scutellaria24_contig00027406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00027406
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containi...   157   9e-37
emb|CBI22024.3| unnamed protein product [Vitis vinifera]              155   4e-36
ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containi...   155   4e-36
ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containi...   154   9e-36
sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-c...   145   3e-33

>ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
           gi|449526872|ref|XP_004170437.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
          Length = 667

 Score =  157 bits (397), Expect = 9e-37
 Identities = 68/97 (70%), Positives = 83/97 (85%)
 Frame = +3

Query: 3   LRSHGYEPDIGSSLHDMDLEEMEYNLLHHSEKLAVAFALMNTPHSVPIRIMKNLRICDDC 182
           L+ HGY P++GS LHDMD EE EYNL HHSEK A+AFALMNT  +VPIR+MKNLR+CDDC
Sbjct: 571 LKQHGYVPELGSVLHDMDNEEKEYNLAHHSEKFAIAFALMNTSENVPIRVMKNLRVCDDC 630

Query: 183 HVAMKYISVVRRRKIILRDSSRFHHFENGHCSCGDYW 293
           H A+K IS +R R+II+RD+SRFHHF++G CSCG+YW
Sbjct: 631 HNAIKCISRIRNREIIVRDASRFHHFKDGECSCGNYW 667


>emb|CBI22024.3| unnamed protein product [Vitis vinifera]
          Length = 119

 Score =  155 bits (391), Expect = 4e-36
 Identities = 66/97 (68%), Positives = 82/97 (84%)
 Frame = +3

Query: 3   LRSHGYEPDIGSSLHDMDLEEMEYNLLHHSEKLAVAFALMNTPHSVPIRIMKNLRICDDC 182
           ++  GY PDI S LHDMD+E+ EY+L+HHSEKLA+AFAL+ TP   PIR++KNLR+C DC
Sbjct: 23  MKKRGYVPDIDSVLHDMDVEDKEYSLVHHSEKLAIAFALLYTPVGTPIRVIKNLRVCSDC 82

Query: 183 HVAMKYISVVRRRKIILRDSSRFHHFENGHCSCGDYW 293
           HVA+KYIS +  R+II+RDSSRFHHF+NG CSCGDYW
Sbjct: 83  HVAIKYISEISNREIIVRDSSRFHHFKNGRCSCGDYW 119


>ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
           [Vitis vinifera]
          Length = 657

 Score =  155 bits (391), Expect = 4e-36
 Identities = 66/97 (68%), Positives = 82/97 (84%)
 Frame = +3

Query: 3   LRSHGYEPDIGSSLHDMDLEEMEYNLLHHSEKLAVAFALMNTPHSVPIRIMKNLRICDDC 182
           ++  GY PDI S LHDMD+E+ EY+L+HHSEKLA+AFAL+ TP   PIR++KNLR+C DC
Sbjct: 561 MKKRGYVPDIDSVLHDMDVEDKEYSLVHHSEKLAIAFALLYTPVGTPIRVIKNLRVCSDC 620

Query: 183 HVAMKYISVVRRRKIILRDSSRFHHFENGHCSCGDYW 293
           HVA+KYIS +  R+II+RDSSRFHHF+NG CSCGDYW
Sbjct: 621 HVAIKYISEISNREIIVRDSSRFHHFKNGRCSCGDYW 657


>ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Glycine max]
          Length = 674

 Score =  154 bits (388), Expect = 9e-36
 Identities = 68/97 (70%), Positives = 80/97 (82%)
 Frame = +3

Query: 3   LRSHGYEPDIGSSLHDMDLEEMEYNLLHHSEKLAVAFALMNTPHSVPIRIMKNLRICDDC 182
           ++  GY PD  S LHDMD EE E  L HHSEKLA+AFALMNTP  VPIR+MKNLR+C DC
Sbjct: 578 IKRQGYVPDTSSVLHDMDNEEKEQILRHHSEKLAIAFALMNTPEGVPIRVMKNLRVCSDC 637

Query: 183 HVAMKYISVVRRRKIILRDSSRFHHFENGHCSCGDYW 293
           HVA+KYIS +++ +II+RDSSRFHHF+NG CSCGDYW
Sbjct: 638 HVAIKYISEIKKLEIIVRDSSRFHHFKNGTCSCGDYW 674


>sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
          Length = 650

 Score =  145 bits (367), Expect = 3e-33
 Identities = 66/97 (68%), Positives = 76/97 (78%)
 Frame = +3

Query: 3   LRSHGYEPDIGSSLHDMDLEEMEYNLLHHSEKLAVAFALMNTPHSVPIRIMKNLRICDDC 182
           ++  GY+PD  S LHDMD EE E +L+ HSEKLAVAFALM  P   PIRI+KNLR+C DC
Sbjct: 554 MKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDC 613

Query: 183 HVAMKYISVVRRRKIILRDSSRFHHFENGHCSCGDYW 293
           HVA KYISV++ R+I LRD SRFHHF NG CSCGDYW
Sbjct: 614 HVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 650


Top