BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00027405
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306200.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33
ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containi...   137   1e-30
ref|XP_002521253.1| pentatricopeptide repeat-containing protein,...   134   6e-30
ref|NP_195239.1| pentatricopeptide repeat-containing protein [Ar...   121   7e-26
ref|XP_002867090.1| pentatricopeptide repeat-containing protein ...   119   3e-25

>ref|XP_002306200.1| predicted protein [Populus trichocarpa] gi|222849164|gb|EEE86711.1|
           predicted protein [Populus trichocarpa]
          Length = 784

 Score =  145 bits (366), Expect = 3e-33
 Identities = 65/101 (64%), Positives = 82/101 (81%)
 Frame = +1

Query: 1   LSRKISEDQYLCSVSKVQPPKLLKKRANSPMFHSVRLAISFGLISTSVGKPVIIRKNVRI 180
           L +KI ED YL S++K +P  + KKR NSP +HSV+LAI FGLIST++G PVI+RKN RI
Sbjct: 684 LLKKIGEDIYLHSLTKFRPLDVAKKRGNSPEYHSVKLAICFGLISTAIGNPVIVRKNTRI 743

Query: 181 CRDCHSSAKKISEITNREIIVGDSKMCHHFKDGVCSCGDYW 303
           C DCH +AKKIS++T REI+VGD+K+ HHF+DG CSC DYW
Sbjct: 744 CDDCHRAAKKISQVTKREIVVGDAKVFHHFRDGCCSCRDYW 784


>ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
            chloroplastic [Vitis vinifera]
            gi|297744563|emb|CBI37825.3| unnamed protein product
            [Vitis vinifera]
          Length = 802

 Score =  137 bits (344), Expect = 1e-30
 Identities = 64/101 (63%), Positives = 78/101 (77%)
 Frame = +1

Query: 1    LSRKISEDQYLCSVSKVQPPKLLKKRANSPMFHSVRLAISFGLISTSVGKPVIIRKNVRI 180
            +S+KI ED Y+ S++K +P  L KKRANS   HS+RLAI FGLIST++G PV++RKN+RI
Sbjct: 702  ISKKIGEDVYVHSLTKFRPSDLEKKRANSAKSHSLRLAICFGLISTTIGNPVLVRKNIRI 761

Query: 181  CRDCHSSAKKISEITNREIIVGDSKMCHHFKDGVCSCGDYW 303
            C  CH  AK+ISE T REIIV DSK+ HHF  G CSCGDYW
Sbjct: 762  CEACHRFAKRISETTKREIIVRDSKIFHHFNGGHCSCGDYW 802


>ref|XP_002521253.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539521|gb|EEF41109.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 484

 Score =  134 bits (338), Expect = 6e-30
 Identities = 63/101 (62%), Positives = 76/101 (75%)
 Frame = +1

Query: 1   LSRKISEDQYLCSVSKVQPPKLLKKRANSPMFHSVRLAISFGLISTSVGKPVIIRKNVRI 180
           + +KI +D Y+ SVSK +   L+ KR NSP  HSV+LAI FGLIST++GKPV+IRK  RI
Sbjct: 384 IMKKIGKDAYVHSVSKFRLVDLMNKRKNSPANHSVKLAICFGLISTAIGKPVVIRKTTRI 443

Query: 181 CRDCHSSAKKISEITNREIIVGDSKMCHHFKDGVCSCGDYW 303
           C DCH  AKKIS +T REII+GDSK+ HHF  G CSC DYW
Sbjct: 444 CEDCHMVAKKISLVTKREIIIGDSKIFHHFNGGSCSCRDYW 484


>ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75098809|sp|O49619.1|PP350_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g35130, chloroplastic; Flags: Precursor
           gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis
           thaliana] gi|7270464|emb|CAB80230.1| putative protein
           [Arabidopsis thaliana] gi|332661071|gb|AEE86471.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 804

 Score =  121 bits (303), Expect = 7e-26
 Identities = 55/95 (57%), Positives = 69/95 (72%)
 Frame = +1

Query: 19  EDQYLCSVSKVQPPKLLKKRANSPMFHSVRLAISFGLISTSVGKPVIIRKNVRICRDCHS 198
           ED Y+  VS+++P  L+K R+NSP  HSVRLA  FGLIST  G+ V +R N RICR CH 
Sbjct: 710 EDIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHE 769

Query: 199 SAKKISEITNREIIVGDSKMCHHFKDGVCSCGDYW 303
             +K S +T REI+VGDSK+ HHF +G CSCG+YW
Sbjct: 770 FLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804


>ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297312926|gb|EFH43349.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 803

 Score =  119 bits (298), Expect = 3e-25
 Identities = 55/95 (57%), Positives = 68/95 (71%)
 Frame = +1

Query: 19  EDQYLCSVSKVQPPKLLKKRANSPMFHSVRLAISFGLISTSVGKPVIIRKNVRICRDCHS 198
           ED Y+  VSK++   L K R+NSP  HSVRLA  FGLIST  G+ V +R N RICR CH 
Sbjct: 709 EDSYVHYVSKLRRETLAKSRSNSPRRHSVRLATCFGLISTETGRTVTVRNNTRICRKCHE 768

Query: 199 SAKKISEITNREIIVGDSKMCHHFKDGVCSCGDYW 303
             +K S++T REI+VGDSK+ HHF +G CSCG+YW
Sbjct: 769 FLEKASKMTRREIVVGDSKIFHHFSNGRCSCGNYW 803