BLASTX nr result

ID: Scutellaria24_contig00027346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00027346
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat...    60   2e-07
ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat...    59   3e-07
emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]    59   3e-07
ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat...    59   4e-07
emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]    55   4e-06

>ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 49/135 (36%), Positives = 66/135 (48%), Gaps = 14/135 (10%)
 Frame = -2

Query: 366 KGLSRENGTFEA*ELFQKM--------IVTFGIVIDGLCKACYTEMVIYFLGEMEERNCR 211
           +GL  E    EA +LF KM        ++T+G +I+GLCK   T   I FL  ME+RNCR
Sbjct: 132 RGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCR 191

Query: 210 PN--MHIIVIDSSHLVQGLNGHLVQ*LNGCLCAGIFNDI*EK*ITPN----SSLICGLSS 49
           P   ++  +IDS    + L   L           +F+D+  K I+PN    SSLI GL  
Sbjct: 192 PTVVVYSTIIDSLCKDRQLTEAL----------SLFSDMLAKGISPNNFTYSSLIHGLCI 241

Query: 48  FSWWKQVEILLK*MI 4
              WK+   L   MI
Sbjct: 242 LGHWKEAIRLFYAMI 256


>ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 49/136 (36%), Positives = 67/136 (49%), Gaps = 14/136 (10%)
 Frame = -2

Query: 366 KGLSRENGTFEA*ELFQKMI--------VTFGIVIDGLCKACYTEMVIYFLGEMEERNCR 211
           +GL  E    EA  LF KMI        VT+G +I+GLCK   T   I  L  ME+ NC+
Sbjct: 148 RGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQ 207

Query: 210 PNMHIIVIDSSHLVQGL--NGHLVQ*LNGCLCAGIFNDI*EK*ITPN----SSLICGLSS 49
           PN    V+  S L+  L  +  + +  N      IF+++  K I+PN    +SLI GL  
Sbjct: 208 PN----VVVFSTLIDSLCKDRQVTEAFN------IFSEMITKGISPNIVTYNSLIHGLCK 257

Query: 48  FSWWKQVEILLK*MID 1
              WK V  L+  M+D
Sbjct: 258 LCEWKHVTTLMNEMVD 273


>emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 49/136 (36%), Positives = 67/136 (49%), Gaps = 14/136 (10%)
 Frame = -2

Query: 366 KGLSRENGTFEA*ELFQKMI--------VTFGIVIDGLCKACYTEMVIYFLGEMEERNCR 211
           +GL  E    EA  LF KMI        VT+G +I+GLCK   T   I  L  ME+ NC+
Sbjct: 148 RGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQ 207

Query: 210 PNMHIIVIDSSHLVQGL--NGHLVQ*LNGCLCAGIFNDI*EK*ITPN----SSLICGLSS 49
           PN    V+  S L+  L  +  + +  N      IF+++  K I+PN    +SLI GL  
Sbjct: 208 PN----VVVFSTLIDSLCKDRQVTEAFN------IFSEMITKGISPNIVTYNSLIHGLCK 257

Query: 48  FSWWKQVEILLK*MID 1
              WK V  L+  M+D
Sbjct: 258 LCEWKHVTTLMNEMVD 273


>ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 46/136 (33%), Positives = 66/136 (48%), Gaps = 14/136 (10%)
 Frame = -2

Query: 366 KGLSRENGTFEA*ELFQKMI--------VTFGIVIDGLCKACYTEMVIYFLGEMEERNCR 211
           +GL  E    EA  LF KM+        VT+G +I GLCK   +   I  L  M ++NC 
Sbjct: 152 RGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCE 211

Query: 210 PNM--HIIVIDSSHLVQGLNGHLVQ*LNGCLCAGIFNDI*EK*ITPN----SSLICGLSS 49
           PN+  +  +ID     + +N  L           IF+++  K I+PN    +S+I GL  
Sbjct: 212 PNVITYNTIIDCLFKDRQVNEAL----------NIFSEMIAKGISPNVSTYNSIIHGLCK 261

Query: 48  FSWWKQVEILLK*MID 1
           FS WK V  L+  M+D
Sbjct: 262 FSEWKHVATLMNEMVD 277


>emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 45/136 (33%), Positives = 66/136 (48%), Gaps = 14/136 (10%)
 Frame = -2

Query: 366 KGLSRENGTFEA*ELFQKMI--------VTFGIVIDGLCKACYTEMVIYFLGEMEERNCR 211
           +G+  E    EA  LF KMI        VT+G +I+GLCK   T   I  LG M ++NC+
Sbjct: 139 RGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQ 198

Query: 210 PNM--HIIVIDSSHLVQGLNGHLVQ*LNGCLCAGIFNDI*EK*ITPN----SSLICGLSS 49
           PN+  +  +IDS          L +         +F+++  K I+P+    +SLI  L +
Sbjct: 199 PNVFAYNTIIDS----------LCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCN 248

Query: 48  FSWWKQVEILLK*MID 1
              WK V  LL  M+D
Sbjct: 249 LCEWKHVATLLNEMVD 264


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