BLASTX nr result

ID: Scutellaria24_contig00027334 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00027334
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT tra...    98   6e-19
ref|XP_003633901.1| PREDICTED: CCR4-NOT transcription complex su...    93   2e-17
ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex su...    93   2e-17
emb|CBI16596.3| unnamed protein product [Vitis vinifera]               93   2e-17
ref|XP_002301259.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17

>ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT transcription complex
            subunit 1-like [Cucumis sativus]
          Length = 2427

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 54/88 (61%), Positives = 64/88 (72%), Gaps = 4/88 (4%)
 Frame = -2

Query: 254  TSLH-SSGTLTEDEKLVSLGFSDQLPSAQGLLQGQ---TQYTVNQLAVPAANIEQQVVVN 87
            T LH SSGTL EDEKL +LG SDQLP+AQGLLQ     + ++ NQL     NI   VV+N
Sbjct: 1258 TPLHLSSGTLMEDEKLSALGLSDQLPTAQGLLQATPSPSPFSTNQLPAGIPNIGSLVVIN 1317

Query: 86   KKLQAYGLHLHFQSVLPIAMDRAVKEIV 3
            +KL + GLH+HFQ  +PIAMDRAVKEIV
Sbjct: 1318 QKLNSLGLHIHFQRAVPIAMDRAVKEIV 1345


>ref|XP_003633901.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Vitis
            vinifera]
          Length = 2333

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 49/82 (59%), Positives = 60/82 (73%), Gaps = 3/82 (3%)
 Frame = -2

Query: 239  SGTLTEDEKLVSLGFSDQLPSAQGLLQG---QTQYTVNQLAVPAANIEQQVVVNKKLQAY 69
            +GTL EDEKLV+L  SDQLPSAQGLLQ    Q  ++V+Q      NI   V++N+K+ A 
Sbjct: 1185 TGTLMEDEKLVALRLSDQLPSAQGLLQATPSQLPFSVSQPTTLIPNIGTHVIINQKISAL 1244

Query: 68   GLHLHFQSVLPIAMDRAVKEIV 3
            GLHLHFQ V PIAMDRA+KEI+
Sbjct: 1245 GLHLHFQRVAPIAMDRAIKEIL 1266


>ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Glycine
            max]
          Length = 2424

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 49/89 (55%), Positives = 61/89 (68%), Gaps = 4/89 (4%)
 Frame = -2

Query: 257  GTSLH-SSGTLTEDEKLVSLGFSDQLPSAQGLLQGQ---TQYTVNQLAVPAANIEQQVVV 90
            G  LH SSG L EDEK+  LG SDQLPSAQGLLQ       ++++QL     NI   V++
Sbjct: 1257 GGPLHISSGALMEDEKVTPLGLSDQLPSAQGLLQANPAPAPFSISQLPTQIPNIGTHVII 1316

Query: 89   NKKLQAYGLHLHFQSVLPIAMDRAVKEIV 3
            N+KL  +GL +HFQ  +PIAMDRA+KEIV
Sbjct: 1317 NQKLSGFGLQMHFQRAVPIAMDRAIKEIV 1345


>emb|CBI16596.3| unnamed protein product [Vitis vinifera]
          Length = 2452

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 49/82 (59%), Positives = 60/82 (73%), Gaps = 3/82 (3%)
 Frame = -2

Query: 239  SGTLTEDEKLVSLGFSDQLPSAQGLLQG---QTQYTVNQLAVPAANIEQQVVVNKKLQAY 69
            +GTL EDEKLV+L  SDQLPSAQGLLQ    Q  ++V+Q      NI   V++N+K+ A 
Sbjct: 1276 TGTLMEDEKLVALRLSDQLPSAQGLLQATPSQLPFSVSQPTTLIPNIGTHVIINQKISAL 1335

Query: 68   GLHLHFQSVLPIAMDRAVKEIV 3
            GLHLHFQ V PIAMDRA+KEI+
Sbjct: 1336 GLHLHFQRVAPIAMDRAIKEIL 1357


>ref|XP_002301259.1| predicted protein [Populus trichocarpa] gi|222842985|gb|EEE80532.1|
            predicted protein [Populus trichocarpa]
          Length = 1987

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 46/83 (55%), Positives = 60/83 (72%), Gaps = 3/83 (3%)
 Frame = -2

Query: 242  SSGTLTEDEKLVSLGFSDQLPSAQGLLQG---QTQYTVNQLAVPAANIEQQVVVNKKLQA 72
            SSGTL EDEKL +LG SDQLPSAQGL Q    Q+ +  +QL     NI   V++N+KL +
Sbjct: 1220 SSGTLMEDEKLAALGLSDQLPSAQGLFQATPSQSTFPASQLPTAIPNIGTHVIINQKLNS 1279

Query: 71   YGLHLHFQSVLPIAMDRAVKEIV 3
            +GLH+HFQ ++P  MDRA+K+IV
Sbjct: 1280 WGLHVHFQRLVPTVMDRAIKDIV 1302


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