BLASTX nr result

ID: Scutellaria24_contig00027148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00027148
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC17072.1| Similar to hypothetical protein gb|Z97336 from A....   116   5e-31
ref|NP_178014.2| Mitochondrial transcription termination factor ...   116   5e-31
gb|AAQ22615.1| At1g78930 [Arabidopsis thaliana]                       116   5e-31
ref|XP_002889220.1| hypothetical protein ARALYDRAFT_477061 [Arab...   115   6e-30
emb|CBI18428.3| unnamed protein product [Vitis vinifera]              112   9e-30

>gb|AAC17072.1| Similar to hypothetical protein gb|Z97336 from A. thaliana. This
           gene is probably cut off [Arabidopsis thaliana]
          Length = 600

 Score =  116 bits (290), Expect(2) = 5e-31
 Identities = 55/86 (63%), Positives = 71/86 (82%)
 Frame = -2

Query: 269 SDDHEIIGKNARRMMAHLSISADEDVQQTLAFFEKIQARRGGLNQLGSENTSFRYLLESF 90
           SD+  ++GK ARRMM +LSI  DEDVQQTL+FFEKI+ARRGGL+ LGS + SFR+LLESF
Sbjct: 193 SDEKGLVGKYARRMMLYLSIPIDEDVQQTLSFFEKIEARRGGLDMLGSVDASFRFLLESF 252

Query: 89  PRLLFLCPQSRVKPIIAFLEDVGVPK 12
           PRLL L  ++ +KP++ FLE +G+PK
Sbjct: 253 PRLLLLSEENDMKPMVEFLESIGIPK 278



 Score = 43.1 bits (100), Expect(2) = 5e-31
 Identities = 23/40 (57%), Positives = 29/40 (72%)
 Frame = -1

Query: 387 GDNGILPFLESLGLSLSSATHLARYLCSSDSNVLPLLIEK 268
           GD G + FLESLGLSLSSA +LA Y+ S     LP+L++K
Sbjct: 145 GDGGKVAFLESLGLSLSSAMYLAHYVSSES---LPILLDK 181


>ref|NP_178014.2| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana] gi|110736356|dbj|BAF00147.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332198059|gb|AEE36180.1| Mitochondrial transcription
           termination factor family protein [Arabidopsis thaliana]
          Length = 591

 Score =  116 bits (290), Expect(2) = 5e-31
 Identities = 55/86 (63%), Positives = 71/86 (82%)
 Frame = -2

Query: 269 SDDHEIIGKNARRMMAHLSISADEDVQQTLAFFEKIQARRGGLNQLGSENTSFRYLLESF 90
           SD+  ++GK ARRMM +LSI  DEDVQQTL+FFEKI+ARRGGL+ LGS + SFR+LLESF
Sbjct: 193 SDEKGLVGKYARRMMLYLSIPIDEDVQQTLSFFEKIEARRGGLDMLGSVDASFRFLLESF 252

Query: 89  PRLLFLCPQSRVKPIIAFLEDVGVPK 12
           PRLL L  ++ +KP++ FLE +G+PK
Sbjct: 253 PRLLLLSEENDMKPMVEFLESIGIPK 278



 Score = 43.1 bits (100), Expect(2) = 5e-31
 Identities = 23/40 (57%), Positives = 29/40 (72%)
 Frame = -1

Query: 387 GDNGILPFLESLGLSLSSATHLARYLCSSDSNVLPLLIEK 268
           GD G + FLESLGLSLSSA +LA Y+ S     LP+L++K
Sbjct: 145 GDGGKVAFLESLGLSLSSAMYLAHYVSSES---LPILLDK 181


>gb|AAQ22615.1| At1g78930 [Arabidopsis thaliana]
          Length = 525

 Score =  116 bits (290), Expect(2) = 5e-31
 Identities = 55/86 (63%), Positives = 71/86 (82%)
 Frame = -2

Query: 269 SDDHEIIGKNARRMMAHLSISADEDVQQTLAFFEKIQARRGGLNQLGSENTSFRYLLESF 90
           SD+  ++GK ARRMM +LSI  DEDVQQTL+FFEKI+ARRGGL+ LGS + SFR+LLESF
Sbjct: 127 SDEKGLVGKYARRMMLYLSIPIDEDVQQTLSFFEKIEARRGGLDMLGSVDASFRFLLESF 186

Query: 89  PRLLFLCPQSRVKPIIAFLEDVGVPK 12
           PRLL L  ++ +KP++ FLE +G+PK
Sbjct: 187 PRLLLLSEENDMKPMVEFLESIGIPK 212



 Score = 43.1 bits (100), Expect(2) = 5e-31
 Identities = 23/40 (57%), Positives = 29/40 (72%)
 Frame = -1

Query: 387 GDNGILPFLESLGLSLSSATHLARYLCSSDSNVLPLLIEK 268
           GD G + FLESLGLSLSSA +LA Y+ S     LP+L++K
Sbjct: 79  GDGGKVAFLESLGLSLSSAMYLAHYVSSES---LPILLDK 115


>ref|XP_002889220.1| hypothetical protein ARALYDRAFT_477061 [Arabidopsis lyrata subsp.
           lyrata] gi|297335061|gb|EFH65479.1| hypothetical protein
           ARALYDRAFT_477061 [Arabidopsis lyrata subsp. lyrata]
          Length = 592

 Score =  115 bits (288), Expect(2) = 6e-30
 Identities = 54/86 (62%), Positives = 71/86 (82%)
 Frame = -2

Query: 269 SDDHEIIGKNARRMMAHLSISADEDVQQTLAFFEKIQARRGGLNQLGSENTSFRYLLESF 90
           SD+  ++GK ARRMM +LSI  DEDVQQTL+FFEKI+ARRGGL+ LGS + SFR+L+ESF
Sbjct: 194 SDEKGLVGKYARRMMLYLSIPIDEDVQQTLSFFEKIEARRGGLDMLGSVDASFRFLIESF 253

Query: 89  PRLLFLCPQSRVKPIIAFLEDVGVPK 12
           PRLL L  ++ +KP++ FLE +G+PK
Sbjct: 254 PRLLLLSEENDMKPMVEFLESIGIPK 279



 Score = 40.4 bits (93), Expect(2) = 6e-30
 Identities = 20/34 (58%), Positives = 24/34 (70%)
 Frame = -1

Query: 387 GDNGILPFLESLGLSLSSATHLARYLCSSDSNVL 286
           GD G + FLESLGLSLSSA +LA Y+ S    +L
Sbjct: 146 GDGGKVAFLESLGLSLSSAMYLAHYVSSESLTIL 179


>emb|CBI18428.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  112 bits (279), Expect(2) = 9e-30
 Identities = 54/88 (61%), Positives = 72/88 (81%)
 Frame = -2

Query: 266 DDHEIIGKNARRMMAHLSISADEDVQQTLAFFEKIQARRGGLNQLGSENTSFRYLLESFP 87
           +D   +GKNARRMM +LSI  DED+QQTL+FFEKI+ARRGGL+ L S++ SF YL+ESFP
Sbjct: 193 NDEGFLGKNARRMMMYLSIPIDEDLQQTLSFFEKIEARRGGLDILCSKDASFGYLVESFP 252

Query: 86  RLLFLCPQSRVKPIIAFLEDVGVPKGNI 3
           RLL L  +S +KP++ FLED+GV +G++
Sbjct: 253 RLLLLSVESHLKPMMKFLEDIGVQRGSM 280



 Score = 43.1 bits (100), Expect(2) = 9e-30
 Identities = 26/40 (65%), Positives = 28/40 (70%)
 Frame = -1

Query: 387 GDNGILPFLESLGLSLSSATHLARYLCSSDSNVLPLLIEK 268
           GD G L FLES+GLSLSSA  +ARYL S     LP LIEK
Sbjct: 144 GDYGRLAFLESIGLSLSSALSVARYLSSES---LPGLIEK 180


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