BLASTX nr result

ID: Scutellaria24_contig00027132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00027132
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310362.1| chromatin remodeling complex subunit [Populu...   144   7e-33
ref|XP_002267403.2| PREDICTED: uncharacterized ATP-dependent hel...   139   3e-31
ref|XP_002513133.1| DNA repair helicase rad5,16, putative [Ricin...   136   2e-30
ref|XP_004164769.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...   128   4e-28
ref|XP_004150194.1| PREDICTED: uncharacterized ATP-dependent hel...   128   4e-28

>ref|XP_002310362.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222853265|gb|EEE90812.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 923

 Score =  144 bits (363), Expect = 7e-33
 Identities = 76/130 (58%), Positives = 91/130 (70%)
 Frame = -1

Query: 390 QMQRALEXXXXXXXXXXXXTEALNLDDDGGVSGCVTLDDAIQIKDSDDFTILPEASNTVK 211
           QMQ++LE            TEALNLDDD   +G + LD   Q ++S D    PEA ++ K
Sbjct: 243 QMQKSLETKSKSEDQRNHKTEALNLDDDDD-NGTLVLDKDKQTRESADIKSTPEAGSSTK 301

Query: 210 GFHSRRPTAGTLIVCPASVLRQWAREMDEKVTADAKLSVLLYHGGNRTKSPTALAKYDAV 31
               RRP AGTL+VCPASVLRQWARE+D+KV   AKLSVL+YHGGNRT+SP  LAK+D V
Sbjct: 302 AISRRRPAAGTLVVCPASVLRQWARELDDKVADGAKLSVLIYHGGNRTRSPDELAKHDVV 361

Query: 30  LTTYAIVTNE 1
           LTTY+IVTNE
Sbjct: 362 LTTYSIVTNE 371


>ref|XP_002267403.2| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like
           [Vitis vinifera]
          Length = 1013

 Score =  139 bits (349), Expect = 3e-31
 Identities = 72/130 (55%), Positives = 88/130 (67%)
 Frame = -1

Query: 390 QMQRALEXXXXXXXXXXXXTEALNLDDDGGVSGCVTLDDAIQIKDSDDFTILPEASNTVK 211
           QMQ++L+            TEALNLDDD   +     D   Q +++ D   + E S ++ 
Sbjct: 328 QMQKSLQSKSKSEELHNHSTEALNLDDDDDNANAAGSDKGKQTEETSDSKPISEVSASLP 387

Query: 210 GFHSRRPTAGTLIVCPASVLRQWAREMDEKVTADAKLSVLLYHGGNRTKSPTALAKYDAV 31
            F  RRP AGTL+VCPASVLRQWARE+DEKV+ +AKLSV LYHGG+RTK P  LAKYD V
Sbjct: 388 EFRRRRPAAGTLVVCPASVLRQWARELDEKVSEEAKLSVCLYHGGSRTKDPVELAKYDVV 447

Query: 30  LTTYAIVTNE 1
           LTTY+IVTNE
Sbjct: 448 LTTYSIVTNE 457


>ref|XP_002513133.1| DNA repair helicase rad5,16, putative [Ricinus communis]
           gi|223548144|gb|EEF49636.1| DNA repair helicase rad5,16,
           putative [Ricinus communis]
          Length = 993

 Score =  136 bits (342), Expect = 2e-30
 Identities = 70/130 (53%), Positives = 91/130 (70%)
 Frame = -1

Query: 390 QMQRALEXXXXXXXXXXXXTEALNLDDDGGVSGCVTLDDAIQIKDSDDFTILPEASNTVK 211
           QMQ+ L+            +EALNLDDD   SG   L++  Q+ + DD T +PEASN+ +
Sbjct: 306 QMQKFLQLKSKSEDQANKKSEALNLDDDDE-SGRPGLNEVKQVGEYDDTTSVPEASNSTR 364

Query: 210 GFHSRRPTAGTLIVCPASVLRQWAREMDEKVTADAKLSVLLYHGGNRTKSPTALAKYDAV 31
            F  +R  AGTL+VCPAS+LRQWA E+D+KV  +AKL+ L+YHGG+RTK P  LAKYD V
Sbjct: 365 VFKRKRLAAGTLVVCPASILRQWAGELDDKVADEAKLTCLIYHGGSRTKDPAELAKYDVV 424

Query: 30  LTTYAIVTNE 1
           LTTY+I+TNE
Sbjct: 425 LTTYSIITNE 434


>ref|XP_004164769.1| PREDICTED: LOW QUALITY PROTEIN: transcription termination factor
           2-like, partial [Cucumis sativus]
          Length = 411

 Score =  128 bits (322), Expect = 4e-28
 Identities = 69/135 (51%), Positives = 85/135 (62%), Gaps = 5/135 (3%)
 Frame = -1

Query: 390 QMQRALEXXXXXXXXXXXXTEALNLDDD-----GGVSGCVTLDDAIQIKDSDDFTILPEA 226
           Q+Q++ +             EALNLDDD     G  +G    D   Q  +SDD   + E 
Sbjct: 74  QLQKSNQSKAKLEDGSKTKAEALNLDDDDDNGTGTGTGTADSDKMQQTGESDDVKTIQEV 133

Query: 225 SNTVKGFHSRRPTAGTLIVCPASVLRQWAREMDEKVTADAKLSVLLYHGGNRTKSPTALA 46
             T +    RRP AGTL+VCPAS+LRQWARE+D+KV  + KLSVL+YHGG+RT+ P  LA
Sbjct: 134 KTT-RAISKRRPAAGTLVVCPASILRQWARELDDKVPEEXKLSVLIYHGGSRTRDPDELA 192

Query: 45  KYDAVLTTYAIVTNE 1
           KYD VLTTYAIVTNE
Sbjct: 193 KYDVVLTTYAIVTNE 207


>ref|XP_004150194.1| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like
           [Cucumis sativus]
          Length = 1015

 Score =  128 bits (322), Expect = 4e-28
 Identities = 69/135 (51%), Positives = 85/135 (62%), Gaps = 5/135 (3%)
 Frame = -1

Query: 390 QMQRALEXXXXXXXXXXXXTEALNLDDD-----GGVSGCVTLDDAIQIKDSDDFTILPEA 226
           Q+Q++ +             EALNLDDD     G  +G    D   Q  +SDD   + E 
Sbjct: 296 QLQKSNQSKAKLEDGSKTKAEALNLDDDDDNGTGTGTGTADSDKMQQTGESDDVKTIQEV 355

Query: 225 SNTVKGFHSRRPTAGTLIVCPASVLRQWAREMDEKVTADAKLSVLLYHGGNRTKSPTALA 46
             T +    RRP AGTL+VCPAS+LRQWARE+D+KV  + KLSVL+YHGG+RT+ P  LA
Sbjct: 356 KTT-RAISKRRPAAGTLVVCPASILRQWARELDDKVPEEKKLSVLIYHGGSRTRDPDELA 414

Query: 45  KYDAVLTTYAIVTNE 1
           KYD VLTTYAIVTNE
Sbjct: 415 KYDVVLTTYAIVTNE 429


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