BLASTX nr result

ID: Scutellaria24_contig00027128 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00027128
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20922.3| unnamed protein product [Vitis vinifera]               74   2e-11
ref|XP_002308622.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002324251.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_002874270.1| hypothetical protein ARALYDRAFT_910622 [Arab...    57   1e-06
emb|CAN79963.1| hypothetical protein VITISV_024480 [Vitis vinifera]    57   1e-06

>emb|CBI20922.3| unnamed protein product [Vitis vinifera]
          Length = 628

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 41/81 (50%), Positives = 54/81 (66%)
 Frame = +2

Query: 2   RNPHPSAEDLQTADYVFYRTFHVRSFTITDQIGDKVGGLEVQYLFNKRGGGGLIIPDGAK 181
           RNP PS E+LQ AD+VFYRTF V + TI D+I DK+ G+EV+++FN+R        +  K
Sbjct: 89  RNPQPSNEELQMADHVFYRTFDVGNCTILDKIDDKIAGVEVEFIFNRRVCQN--SNEVPK 146

Query: 182 CDSNDKVEERDVVACRETLKL 244
            DSN K +   VVA  ETL+L
Sbjct: 147 MDSNRKEDIGRVVASSETLQL 167


>ref|XP_002308622.1| predicted protein [Populus trichocarpa] gi|222854598|gb|EEE92145.1|
           predicted protein [Populus trichocarpa]
          Length = 545

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
 Frame = +2

Query: 2   RNPHPSAEDLQTADYVFYRTFHVRSFTITDQIGDKVGGLEVQYLFNKRGG-GGLIIPDGA 178
           RNP PS E+LQ AD+VFYRTF V +  I D+I DK+ G+EV++L N+ G      +P   
Sbjct: 132 RNPQPSDEELQEADFVFYRTFDVGNCRILDKIDDKIAGIEVKFLLNRVGNQSSSGVP--- 188

Query: 179 KCDSNDKVEERDVVACRET 235
           K DS  K    + VA  +T
Sbjct: 189 KLDSKKKEVSGNFVATNDT 207


>ref|XP_002324251.1| predicted protein [Populus trichocarpa] gi|222865685|gb|EEF02816.1|
           predicted protein [Populus trichocarpa]
          Length = 542

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
 Frame = +2

Query: 2   RNPHPSAEDLQTADYVFYRTFHVRSFTITDQIGDKVGGLEVQYLFNKRGG-GGLIIPDGA 178
           RNP PS E+LQ AD+VFYR F V +  I D I +K+ G+EV++L N+ G      +P   
Sbjct: 132 RNPLPSDEELQEADFVFYRAFDVGNCRILDMIDEKIAGIEVKFLLNRVGNQNSSGVP--- 188

Query: 179 KCDSNDKVEERDVVACRETLKLRGKE 256
           K DSN K    +     +T  L  KE
Sbjct: 189 KLDSNKKEVSGNAGVTDDTRILAKKE 214


>ref|XP_002874270.1| hypothetical protein ARALYDRAFT_910622 [Arabidopsis lyrata subsp.
           lyrata] gi|297320107|gb|EFH50529.1| hypothetical protein
           ARALYDRAFT_910622 [Arabidopsis lyrata subsp. lyrata]
          Length = 265

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 23/47 (48%), Positives = 37/47 (78%)
 Frame = +2

Query: 2   RNPHPSAEDLQTADYVFYRTFHVRSFTITDQIGDKVGGLEVQYLFNK 142
           RNP PS E++++AD+ F RTF V ++ I D+I DK+ G++V+++FNK
Sbjct: 142 RNPQPSDEEIKSADFFFRRTFDVGTYKILDKIDDKIAGVDVKFIFNK 188


>emb|CAN79963.1| hypothetical protein VITISV_024480 [Vitis vinifera]
          Length = 385

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/71 (36%), Positives = 41/71 (57%)
 Frame = +2

Query: 2   RNPHPSAEDLQTADYVFYRTFHVRSFTITDQIGDKVGGLEVQYLFNKRGGGGLIIPDGAK 181
           RNP  S  +L+ ADY+FYRTF + S  I+D   D + G++V+Y FN++    L+ P   K
Sbjct: 150 RNPRVSQVELREADYIFYRTFDIGSLKISDNFADLIDGIKVEYFFNRKKDQKLLNPRNIK 209

Query: 182 CDSNDKVEERD 214
            +   + +  D
Sbjct: 210 ANLEVRTQTID 220


Top