BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00026979
         (949 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal doma...   256   6e-66
ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal doma...   252   1e-64
ref|XP_002519032.1| double-stranded RNA binding protein, putativ...   250   4e-64
ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal doma...   240   3e-61
ref|XP_003543063.1| PREDICTED: RNA polymerase II C-terminal doma...   239   5e-61

>ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            1-like [Glycine max]
          Length = 960

 Score =  256 bits (654), Expect = 6e-66
 Identities = 149/312 (47%), Positives = 199/312 (63%), Gaps = 8/312 (2%)
 Frame = -1

Query: 943  FDGMADAEVEKRLKEAMYATSTAPKPM--IDPRISSTLQYAVPSNSFAVHPPTIQGTTMP 770
            FDGMADAEVE++LK+A+ A ST P     +DPR++S     VPS S  V PPT Q + MP
Sbjct: 446  FDGMADAEVERKLKDALAAASTFPVTTANLDPRLTSLQYTMVPSGS--VPPPTAQASMMP 503

Query: 769  FLSQQLSQVTTMLKSPLAGPAQAEKPLHTSPGREEGEVPESELDPDTRRRLLILQHGLDM 590
            F   Q  Q  T++K P+   A ++  LH+SP REEGEVPESELDPDTRRRLLILQHG D 
Sbjct: 504  FPHVQFPQPATLVK-PMGQAAPSDPSLHSSPAREEGEVPESELDPDTRRRLLILQHGQDT 562

Query: 589  REHPQNDTQFPAQPPGHVPLSRV-NPHG-WFPVEEETSLREPNRVSPPMQFNAESLP--I 422
            R+H   +  FP + P      RV +  G WFPVEEE   +  NRV P  +F  +S P  I
Sbjct: 563  RDHASAEPPFPVRHPVQASAPRVPSSRGVWFPVEEEIGSQPLNRVVPK-EFPVDSGPLGI 621

Query: 421  DKNRIHHPTFLHNVKTSLPPGRVLEI--QRLPREELPRQDLLRVNEPFPDFHSISGEGSP 248
            +K R+HHP+F + V++S+   R+L    QRLP+E   R D  R+N     + S SG+  P
Sbjct: 622  EKPRLHHPSFFNKVESSISSDRILHDSHQRLPKEMYHRDDRPRLNHMLSSYRSFSGDDIP 681

Query: 247  AAQLSSTNKELDLEAGLIDPHRVTSTGALQDIALKCGTKVEFKQTIVSSTKLQFCVEVLF 68
             ++ SS++++LD E+G    H  T    L +IALKCGTKV+F  ++V+ST+L+F +E  F
Sbjct: 682  FSRSSSSHRDLDSESGHSVLHADTPVAVLHEIALKCGTKVDFMSSLVASTELKFSLEAWF 741

Query: 67   AGEKIGEGIGRT 32
            +G+KIG G GRT
Sbjct: 742  SGKKIGHGFGRT 753


>ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            1-like [Glycine max]
          Length = 954

 Score =  252 bits (643), Expect = 1e-64
 Identities = 151/315 (47%), Positives = 196/315 (62%), Gaps = 11/315 (3%)
 Frame = -1

Query: 943  FDGMADAEVEKRLKEAMYATSTAPKPM--IDPRISSTLQYAVPSNSFAVHPPTIQGTTMP 770
            FDGMADAEVE++LK+A+ A ST P     +DPR++S     VPS S  V PPT Q + MP
Sbjct: 440  FDGMADAEVERKLKDALSAASTIPVTTANLDPRLTSLQYTMVPSGS--VPPPTAQASMMP 497

Query: 769  FLSQQLSQVTTMLKSPLAGPAQAEKPLHTSPGREEGEVPESELDPDTRRRLLILQHGLDM 590
            F   Q  Q  T++K P+   A +E  LH+SP REEGEVPESELDPDTRRRLLILQHG D 
Sbjct: 498  FPHVQFPQPATLVK-PMGQAAPSEPSLHSSPAREEGEVPESELDPDTRRRLLILQHGQDT 556

Query: 589  REHPQNDTQFPAQPP-----GHVPLSRVNPHGWFPVEEETSLREPNRVSPPMQFNAESLP 425
            R+H   +  FP + P      HVP SR     WFP EEE   +  NRV P  +F  +S P
Sbjct: 557  RDHASAEPPFPVRHPVQTSAPHVPSSR---GVWFPAEEEIGSQPLNRVVPK-EFPVDSGP 612

Query: 424  --IDKNRIHHPTFLHNVKTSLPPGRVLEI--QRLPREELPRQDLLRVNEPFPDFHSISGE 257
              I K R HHP+F   V++S+   R+L    QRLP+E   R D  R+N     + S SG+
Sbjct: 613  LGIAKPRPHHPSFFSKVESSISSDRILHDSHQRLPKEMYHRDDRPRLNHMLSSYRSFSGD 672

Query: 256  GSPAAQLSSTNKELDLEAGLIDPHRVTSTGALQDIALKCGTKVEFKQTIVSSTKLQFCVE 77
              P ++  S++++LD E+G    H  T    LQ+IALKCGTKV+F  ++V+ST+LQF +E
Sbjct: 673  DIPFSRSFSSHRDLDSESGHSVLHADTPVAVLQEIALKCGTKVDFISSLVASTELQFSME 732

Query: 76   VLFAGEKIGEGIGRT 32
              F+G+KIG  +GRT
Sbjct: 733  AWFSGKKIGHRVGRT 747


>ref|XP_002519032.1| double-stranded RNA binding protein, putative [Ricinus communis]
            gi|223541695|gb|EEF43243.1| double-stranded RNA binding
            protein, putative [Ricinus communis]
          Length = 978

 Score =  250 bits (638), Expect = 4e-64
 Identities = 145/313 (46%), Positives = 201/313 (64%), Gaps = 7/313 (2%)
 Frame = -1

Query: 949  VGFDGMADAEVEKRLKEAMYATSTAPKPM--IDPRISSTLQYAVPSNSFAVHPPTIQGTT 776
            + FDGMADAEVEKRLKEA+  +S  P  +  +D R+   LQY + S+S ++  PT Q   
Sbjct: 461  LSFDGMADAEVEKRLKEAISISSAFPSTVANLDARLVPPLQYTMASSS-SIPVPTSQPAV 519

Query: 775  MPFLSQQLSQVTTMLKSPLAGPAQAEKPLHTSPGREEGEVPESELDPDTRRRLLILQHGL 596
            + F S QL Q   ++K PL     +E  L +SP REEGEVPESELDPDTRRRLLILQHG 
Sbjct: 520  VTFPSMQLPQAAPLVK-PLGQVVPSEPSLQSSPAREEGEVPESELDPDTRRRLLILQHGQ 578

Query: 595  DMREHPQNDTQFPAQPPGHVPLS--RVNPHG-WFPVEEETSLREPNR-VSPPMQFNAESL 428
            D+R+   +++ FP +P   + +S  RV   G W PVEEE S R+ NR V+     + E +
Sbjct: 579  DLRDPAPSESPFPVRPSNSMQVSVPRVQSRGNWVPVEEEMSPRQLNRAVTREFPMDTEPM 638

Query: 427  PIDKNRIHHPTFLHNVKTSLPPGRVL-EIQRLPREELPRQDLLRVNEPFPDFHSISGEGS 251
             IDK+R HHP+F   V++S+P  R+  E QRLP+    + D LR+N+   ++ S+SGE +
Sbjct: 639  HIDKHRPHHPSFFPKVESSIPSERMPHENQRLPKVAPYKDDRLRLNQTMSNYQSLSGEEN 698

Query: 250  PAAQLSSTNKELDLEAGLIDPHRVTSTGALQDIALKCGTKVEFKQTIVSSTKLQFCVEVL 71
              ++ SS+N++LD+E+        T    L +I++KCG KVEFK ++V+S  LQF VE  
Sbjct: 699  SLSRSSSSNRDLDVESDRAVSSAETPVRVLHEISMKCGAKVEFKHSLVNSRDLQFSVEAW 758

Query: 70   FAGEKIGEGIGRT 32
            FAGE++GEG GRT
Sbjct: 759  FAGERVGEGFGRT 771


>ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            1-like [Glycine max]
          Length = 958

 Score =  240 bits (613), Expect = 3e-61
 Identities = 142/312 (45%), Positives = 190/312 (60%), Gaps = 8/312 (2%)
 Frame = -1

Query: 943  FDGMADAEVEKRLKEAMYATSTAPKPM--IDPRIS--STLQYAVPSNSFAVHPPTIQGTT 776
            FDGMADAEVE+RLK+A+ A+ST P     +DPR++  S+LQY + S+S  V PPT Q + 
Sbjct: 441  FDGMADAEVERRLKDAISASSTVPAMTTNLDPRLAFNSSLQYTMVSSSGTVPPPTAQASI 500

Query: 775  MPFLSQQLSQVTTMLKSPLAGPAQAEKPLHTSPGREEGEVPESELDPDTRRRLLILQHGL 596
            + F + Q  Q  T++K P+         LH+SP REEGEVPESELD DTRRRLLILQHG 
Sbjct: 501  VQFGNVQFPQPNTLVK-PICQVTPPGPSLHSSPAREEGEVPESELDLDTRRRLLILQHGQ 559

Query: 595  DMREHPQNDTQFPAQPPGHVPLSRV-NPHGWFPVEEETSLREPNRVSPP-MQFNAESLPI 422
            D REH  ++   P + P  V    V +  GWF VEEE   ++ N++ P      +E L I
Sbjct: 560  DTREHTSSEPPLPVRHPTQVSAPSVPSRRGWFSVEEEMGPQQLNQLVPKEFPVGSEPLHI 619

Query: 421  DKNRIHHPTFLHNVKTSLPPGRVLEI--QRLPREELPRQDLLRVNEPFPDFHSISGEGSP 248
            +K    HP+    V  S+   RV     QRLP+E   R D  R+++    +HS  G+  P
Sbjct: 620  EKRWPRHPSLFSKVDDSVSSDRVFHESHQRLPKEVHHRDDHSRLSQSLSSYHSFPGDDIP 679

Query: 247  AAQLSSTNKELDLEAGLIDPHRVTSTGALQDIALKCGTKVEFKQTIVSSTKLQFCVEVLF 68
             +  S +N++ D E+G    H   + G LQ+IALKCGTKVEF  ++V+ST LQF +E  F
Sbjct: 680  LSGSSYSNRDFDSESGRSLFHADITAGVLQEIALKCGTKVEFLSSLVASTALQFSIEAWF 739

Query: 67   AGEKIGEGIGRT 32
            AG+K+GEG GRT
Sbjct: 740  AGKKVGEGFGRT 751


>ref|XP_003543063.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            1-like [Glycine max]
          Length = 960

 Score =  239 bits (611), Expect = 5e-61
 Identities = 146/315 (46%), Positives = 196/315 (62%), Gaps = 11/315 (3%)
 Frame = -1

Query: 943  FDGMADAEVEKRLKEAMYATST--APKPMIDPRIS--STLQYAVPSNSFAVHPPTIQGTT 776
            FDGMADAEVE+RLK+A+ A+ST  A    IDPR++  S+LQY + S+S  V PPT Q + 
Sbjct: 440  FDGMADAEVERRLKDAISASSTILALTANIDPRLAFTSSLQYTMVSSSGTVPPPTAQASV 499

Query: 775  MPFLSQQLSQVTTMLKSPLAGPAQAEKPLHTSPGREEGEVPESELDPDTRRRLLILQHGL 596
            + F + Q  Q  T++K P++        LH+SP REEGE+PESELD DTRRR LILQHG 
Sbjct: 500  VQFGNVQFPQPNTLVK-PMSQVTHPGLSLHSSPAREEGELPESELDLDTRRRFLILQHGQ 558

Query: 595  DMREHPQNDTQFPAQPPGHV--PLSRV-NPHGWFPVEEETSLREPNRVSPPMQFNAESLP 425
            D RE   ++  FP + P  V  P S V +  GWF VEEE   ++ N +  P +F  +S P
Sbjct: 559  DTRERMASEPPFPVRHPAQVSAPASSVPSRRGWFSVEEEMGPQQLN-LPVPKEFPVDSEP 617

Query: 424  --IDKNRIHHPTFLHNVKTSLPPGRVLEI--QRLPREELPRQDLLRVNEPFPDFHSISGE 257
              I+K    HP+F   V  S+   RV     QRLP+E   R D  R+++    +HS+ G+
Sbjct: 618  FHIEKRWPRHPSFFSKVGDSISSDRVFHESHQRLPKEVHHRDDRSRLSQSLSSYHSLPGD 677

Query: 256  GSPAAQLSSTNKELDLEAGLIDPHRVTSTGALQDIALKCGTKVEFKQTIVSSTKLQFCVE 77
              P +  S +N++ D E+G    H  T+ G LQ+IAL CGTKVEF  ++V+ST+LQF +E
Sbjct: 678  DIPLSGSSYSNRDFDSESGRSLFHADTTAGVLQEIALNCGTKVEFLSSLVASTELQFSIE 737

Query: 76   VLFAGEKIGEGIGRT 32
              FAG+KIGEG GRT
Sbjct: 738  AWFAGKKIGEGFGRT 752