BLASTX nr result

ID: Scutellaria24_contig00026954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00026954
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273713.1| PREDICTED: glutamate receptor 3.7 [Vitis vin...   115   4e-24
ref|XP_002524180.1| glutamate receptor 3 plant, putative [Ricinu...   102   2e-20
gb|AAR27949.1| GLR3.3 [Arabidopsis thaliana]                          102   3e-20
ref|NP_174978.1| glutamate receptor 3.3 [Arabidopsis thaliana] g...   102   3e-20
dbj|BAJ34475.1| unnamed protein product [Thellungiella halophila]     102   4e-20

>ref|XP_002273713.1| PREDICTED: glutamate receptor 3.7 [Vitis vinifera]
          Length = 909

 Score =  115 bits (288), Expect = 4e-24
 Identities = 54/78 (69%), Positives = 68/78 (87%)
 Frame = +2

Query: 224 EKPAVVKVGAVFTFDSVIGKGAKVAMEMAVEDINSNPRILNGTEFKVIMEDLSCSVFMGS 403
           ++PAVV +GAVFTFDSVIG+ AKVAM++AV D+NS+PRILNGTE  +IM D  CSVFMG 
Sbjct: 24  QRPAVVNIGAVFTFDSVIGRPAKVAMKVAVSDVNSDPRILNGTELNLIMGDAKCSVFMGC 83

Query: 404 IKAFQVIEKEVVAIVGPQ 457
           I AFQV+E++V+AI+GPQ
Sbjct: 84  IAAFQVLERQVLAIIGPQ 101


>ref|XP_002524180.1| glutamate receptor 3 plant, putative [Ricinus communis]
           gi|223536549|gb|EEF38195.1| glutamate receptor 3 plant,
           putative [Ricinus communis]
          Length = 921

 Score =  102 bits (255), Expect = 2e-20
 Identities = 49/78 (62%), Positives = 61/78 (78%)
 Frame = +2

Query: 224 EKPAVVKVGAVFTFDSVIGKGAKVAMEMAVEDINSNPRILNGTEFKVIMEDLSCSVFMGS 403
           ++P  V +GAVFTFDSVIG+ AK AME AV DIN + RILNGTE K+ M D  C VF+GS
Sbjct: 31  QRPKFVNIGAVFTFDSVIGRVAKPAMEAAVSDINKDTRILNGTELKLFMVDAQCDVFLGS 90

Query: 404 IKAFQVIEKEVVAIVGPQ 457
           + A +V+EK+VVAI+GPQ
Sbjct: 91  VGALRVLEKDVVAIIGPQ 108


>gb|AAR27949.1| GLR3.3 [Arabidopsis thaliana]
          Length = 933

 Score =  102 bits (254), Expect = 3e-20
 Identities = 45/80 (56%), Positives = 67/80 (83%)
 Frame = +2

Query: 218 YGEKPAVVKVGAVFTFDSVIGKGAKVAMEMAVEDINSNPRILNGTEFKVIMEDLSCSVFM 397
           + EKP VVK+G++F+FDSVIGK AK+A++ AV+D+NSNP IL+GT+F V M++ +CS FM
Sbjct: 22  HSEKPKVVKIGSIFSFDSVIGKVAKIAIDEAVKDVNSNPDILSGTKFSVSMQNSNCSGFM 81

Query: 398 GSIKAFQVIEKEVVAIVGPQ 457
           G ++A + +EK++V I+GPQ
Sbjct: 82  GMVEALRFMEKDIVGIIGPQ 101


>ref|NP_174978.1| glutamate receptor 3.3 [Arabidopsis thaliana]
           gi|41017227|sp|Q9C8E7.1|GLR33_ARATH RecName:
           Full=Glutamate receptor 3.3; AltName: Full=Ligand-gated
           ion channel 3.3; Flags: Precursor
           gi|12322630|gb|AAG51316.1|AC025815_3 ligand-gated ion
           channel, putative [Arabidopsis thaliana]
           gi|332193804|gb|AEE31925.1| glutamate receptor 3.3
           [Arabidopsis thaliana]
          Length = 933

 Score =  102 bits (254), Expect = 3e-20
 Identities = 45/80 (56%), Positives = 67/80 (83%)
 Frame = +2

Query: 218 YGEKPAVVKVGAVFTFDSVIGKGAKVAMEMAVEDINSNPRILNGTEFKVIMEDLSCSVFM 397
           + EKP VVK+G++F+FDSVIGK AK+A++ AV+D+NSNP IL+GT+F V M++ +CS FM
Sbjct: 22  HSEKPKVVKIGSIFSFDSVIGKVAKIAIDEAVKDVNSNPDILSGTKFSVSMQNSNCSGFM 81

Query: 398 GSIKAFQVIEKEVVAIVGPQ 457
           G ++A + +EK++V I+GPQ
Sbjct: 82  GMVEALRFMEKDIVGIIGPQ 101


>dbj|BAJ34475.1| unnamed protein product [Thellungiella halophila]
          Length = 921

 Score =  102 bits (253), Expect = 4e-20
 Identities = 47/77 (61%), Positives = 63/77 (81%)
 Frame = +2

Query: 224 EKPAVVKVGAVFTFDSVIGKGAKVAMEMAVEDINSNPRILNGTEFKVIMEDLSCSVFMGS 403
           ++P VVK+GAVF FDSVIGK AK+A+E AV D+N++  +L  TE +++MED SC+VF GS
Sbjct: 26  QRPQVVKLGAVFAFDSVIGKAAKIALEAAVSDVNADTSVLRETELRLLMEDSSCNVFHGS 85

Query: 404 IKAFQVIEKEVVAIVGP 454
             AFQV+EKEVVA++GP
Sbjct: 86  FGAFQVLEKEVVAMIGP 102


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