BLASTX nr result

ID: Scutellaria24_contig00026943 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00026943
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282129.2| PREDICTED: pentatricopeptide repeat-containi...   153   1e-35
ref|XP_004134397.1| PREDICTED: pentatricopeptide repeat-containi...   137   1e-30
emb|CAN83112.1| hypothetical protein VITISV_026574 [Vitis vinifera]   119   3e-25
ref|XP_003589755.1| Pentatricopeptide repeat-containing protein ...   109   2e-22
ref|XP_003533693.1| PREDICTED: pentatricopeptide repeat-containi...   108   6e-22

>ref|XP_002282129.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 691

 Score =  153 bits (387), Expect = 1e-35
 Identities = 69/107 (64%), Positives = 86/107 (80%)
 Frame = -3

Query: 407 WGALLGACRVHKNMAMAEIAGEKILHLEPFNSGVYMILAEMYLANGMREKAYSMWARMKE 228
           WGA+LGACR+HKNM + EIAGE+IL +EP NSGVY+ILAEMYL++G RE A  +W RM+E
Sbjct: 561 WGAVLGACRIHKNMQVGEIAGERILEIEPHNSGVYIILAEMYLSSGKREDAERVWVRMRE 620

Query: 227 KGVKKQPGCSWIECGNSGKVFLAGDKAHIEFKRISFVLDLIHCEMDI 87
           KGVKKQP CSW+E   SG VFL+GD +H +F R+  VL L+H EM+I
Sbjct: 621 KGVKKQPACSWMEVNGSGHVFLSGDSSHPQFSRVCGVLGLLHMEMEI 667


>ref|XP_004134397.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
           gi|449487596|ref|XP_004157705.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 675

 Score =  137 bits (344), Expect = 1e-30
 Identities = 65/106 (61%), Positives = 80/106 (75%)
 Frame = -3

Query: 407 WGALLGACRVHKNMAMAEIAGEKILHLEPFNSGVYMILAEMYLANGMREKAYSMWARMKE 228
           WGALLGACR+HKN  +  IAGEK+L  EP N+GVY+ILAEMYL NG RE A  ++ARMK 
Sbjct: 566 WGALLGACRIHKNYDVGVIAGEKVLEKEPHNAGVYLILAEMYLRNGKRENAEKIFARMKN 625

Query: 227 KGVKKQPGCSWIECGNSGKVFLAGDKAHIEFKRISFVLDLIHCEMD 90
            GVKKQPGCSWIE  N G VFL+GD ++  F RI  V+ L++ E++
Sbjct: 626 NGVKKQPGCSWIEVNNCGYVFLSGDCSNPHFDRICSVVKLVNLEIN 671


>emb|CAN83112.1| hypothetical protein VITISV_026574 [Vitis vinifera]
          Length = 833

 Score =  119 bits (298), Expect = 3e-25
 Identities = 57/107 (53%), Positives = 72/107 (67%)
 Frame = -3

Query: 407 WGALLGACRVHKNMAMAEIAGEKILHLEPFNSGVYMILAEMYLANGMREKAYSMWARMKE 228
           WGA+LGACR+HKN+ + EIAGE+IL +EP N              G RE A  +W RM+E
Sbjct: 715 WGAVLGACRIHKNIQVGEIAGERILEIEPHNFC------------GKREDAERVWVRMRE 762

Query: 227 KGVKKQPGCSWIECGNSGKVFLAGDKAHIEFKRISFVLDLIHCEMDI 87
           KGVKKQP CSW+E   SG VFL+GD +H +F R+  VL L+H EM+I
Sbjct: 763 KGVKKQPACSWMEVNGSGHVFLSGDSSHPQFSRVCGVLGLLHMEMEI 809


>ref|XP_003589755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355478803|gb|AES60006.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 891

 Score =  109 bits (273), Expect = 2e-22
 Identities = 46/105 (43%), Positives = 75/105 (71%)
 Frame = -3

Query: 407 WGALLGACRVHKNMAMAEIAGEKILHLEPFNSGVYMILAEMYLANGMREKAYSMWARMKE 228
           WGALL  C VH N  + ++  +K+L +EP N+  Y++ + MY + GMRE+A ++  +MK+
Sbjct: 504 WGALLAGCSVHGNADIGKLVADKVLKMEPENADTYLLASNMYASVGMREEAANVRMKMKK 563

Query: 227 KGVKKQPGCSWIECGNSGKVFLAGDKAHIEFKRISFVLDLIHCEM 93
           KG+KKQPGCSWI+ GN+ +VF+  DK+H +F+ + ++L  +H +M
Sbjct: 564 KGLKKQPGCSWIDVGNTVQVFVVNDKSHSQFEMLKYLLLDLHTKM 608


>ref|XP_003533693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Glycine max]
          Length = 581

 Score =  108 bits (269), Expect = 6e-22
 Identities = 48/105 (45%), Positives = 72/105 (68%)
 Frame = -3

Query: 407 WGALLGACRVHKNMAMAEIAGEKILHLEPFNSGVYMILAEMYLANGMREKAYSMWARMKE 228
           WGALL  C VH N  + ++  EKIL +EP N+G Y +L+ MY + G  ++A ++  RMK+
Sbjct: 460 WGALLAGCNVHGNADIGKLVAEKILKIEPQNAGTYSLLSNMYASVGKWKEAANVRMRMKD 519

Query: 227 KGVKKQPGCSWIECGNSGKVFLAGDKAHIEFKRISFVLDLIHCEM 93
            G+KKQPGCSWIE GN+ +VF+ GDK H +++ +  +L  +H +M
Sbjct: 520 MGLKKQPGCSWIEVGNTVQVFVVGDKPHSQYEPLGHLLHDLHTKM 564


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