BLASTX nr result

ID: Scutellaria24_contig00026807 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00026807
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279575.1| PREDICTED: ribosome biogenesis protein WDR12...    92   6e-17
emb|CAN70824.1| hypothetical protein VITISV_042345 [Vitis vinifera]    92   6e-17
ref|XP_002324109.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_004168778.1| PREDICTED: ribosome biogenesis protein WDR12...    89   3e-16
ref|XP_004149101.1| PREDICTED: ribosome biogenesis protein WDR12...    89   3e-16

>ref|XP_002279575.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Vitis
           vinifera] gi|296082215|emb|CBI21220.3| unnamed protein
           product [Vitis vinifera]
          Length = 438

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/68 (64%), Positives = 56/68 (82%)
 Frame = -3

Query: 204 MDIDGGVEAGEESSRQVEVRFITKLKPPYKVPQASISIPANLTRFGLSALVNNLLQAGNV 25
           M+IDG VE   E+SR+V+VRF TKL+ P+K P  SI+IP+NLTR GLSA+VNNLL++GN 
Sbjct: 1   MEIDGDVE---ETSRRVQVRFTTKLQSPFKTPPTSIAIPSNLTRMGLSAIVNNLLKSGNP 57

Query: 24  DWESEPFD 1
           DW+ EPFD
Sbjct: 58  DWKPEPFD 65


>emb|CAN70824.1| hypothetical protein VITISV_042345 [Vitis vinifera]
          Length = 427

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/68 (64%), Positives = 56/68 (82%)
 Frame = -3

Query: 204 MDIDGGVEAGEESSRQVEVRFITKLKPPYKVPQASISIPANLTRFGLSALVNNLLQAGNV 25
           M+IDG VE   E+SR+V+VRF TKL+ P+K P  SI+IP+NLTR GLSA+VNNLL++GN 
Sbjct: 1   MEIDGDVE---ETSRRVQVRFTTKLQSPFKTPPTSIAIPSNLTRMGLSAIVNNLLKSGNP 57

Query: 24  DWESEPFD 1
           DW+ EPFD
Sbjct: 58  DWKPEPFD 65


>ref|XP_002324109.1| predicted protein [Populus trichocarpa] gi|222867111|gb|EEF04242.1|
           predicted protein [Populus trichocarpa]
          Length = 433

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 44/68 (64%), Positives = 55/68 (80%)
 Frame = -3

Query: 204 MDIDGGVEAGEESSRQVEVRFITKLKPPYKVPQASISIPANLTRFGLSALVNNLLQAGNV 25
           MD+D  VE      R+V+VRFITKLKPP+KVP  SI+IPANLTR GLS +VN+LL+AG+ 
Sbjct: 1   MDMDSDVE-----ERRVQVRFITKLKPPFKVPNTSIAIPANLTRLGLSTIVNSLLKAGDD 55

Query: 24  DWESEPFD 1
           +WES+PFD
Sbjct: 56  EWESQPFD 63


>ref|XP_004168778.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Cucumis
           sativus]
          Length = 434

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 44/68 (64%), Positives = 54/68 (79%)
 Frame = -3

Query: 204 MDIDGGVEAGEESSRQVEVRFITKLKPPYKVPQASISIPANLTRFGLSALVNNLLQAGNV 25
           MDIDG  E   ++SR+V+VRFITKL  P+KVP  +I+IP+NLTR GLS +VNNLL AGN 
Sbjct: 1   MDIDGDFE---DTSRRVQVRFITKLIAPFKVPANAIAIPSNLTRLGLSTVVNNLLSAGNP 57

Query: 24  DWESEPFD 1
           +WE EPFD
Sbjct: 58  EWEEEPFD 65


>ref|XP_004149101.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Cucumis
           sativus]
          Length = 434

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 44/68 (64%), Positives = 54/68 (79%)
 Frame = -3

Query: 204 MDIDGGVEAGEESSRQVEVRFITKLKPPYKVPQASISIPANLTRFGLSALVNNLLQAGNV 25
           MDIDG  E   ++SR+V+VRFITKL  P+KVP  +I+IP+NLTR GLS +VNNLL AGN 
Sbjct: 1   MDIDGDFE---DTSRRVQVRFITKLIAPFKVPANAIAIPSNLTRLGLSTVVNNLLSAGNP 57

Query: 24  DWESEPFD 1
           +WE EPFD
Sbjct: 58  EWEEEPFD 65


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