BLASTX nr result

ID: Scutellaria24_contig00026778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00026778
         (597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305882.1| predicted protein [Populus trichocarpa] gi|2...   129   5e-28
ref|XP_002306035.1| predicted protein [Populus trichocarpa] gi|2...   127   2e-27
ref|XP_004162315.1| PREDICTED: 60S ribosomal export protein NMD3...   118   9e-25
ref|XP_004143504.1| PREDICTED: 60S ribosomal export protein NMD3...   118   9e-25
ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3...   117   1e-24

>ref|XP_002305882.1| predicted protein [Populus trichocarpa] gi|222848846|gb|EEE86393.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score =  129 bits (323), Expect = 5e-28
 Identities = 74/130 (56%), Positives = 88/130 (67%), Gaps = 5/130 (3%)
 Frame = -1

Query: 597 LGYDLYGANINDMELNKYKDLDLPHAILVKKIYEEKRV----KPRSLKLKSPNMEIDDAT 430
           LGYDL+GAN NDMEL+KYK+L +P AILVKK YEEKR     KPRS KLKS NME+DD  
Sbjct: 375 LGYDLHGANSNDMELDKYKNLVIPEAILVKKSYEEKRQRKRGKPRSWKLKSLNMEVDDTR 434

Query: 429 KGGDNDLDNSDYEHFLKDLEEMPDLMSNLSLCPDGEIRPCESDSMADDECL-SFSLVHEF 253
             GD +  NS+YE FL+DLEE P+L  N+SL  + E +P E  SM D E + S  L    
Sbjct: 435 ARGDQEKMNSEYEQFLRDLEENPELRFNVSLYRNKEYQPSEMASMTDGEDIPSIPLEELL 494

Query: 252 DDLDIDG*ED 223
            DL+ID  ED
Sbjct: 495 ADLEIDDAED 504


>ref|XP_002306035.1| predicted protein [Populus trichocarpa] gi|222848999|gb|EEE86546.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score =  127 bits (318), Expect = 2e-27
 Identities = 73/130 (56%), Positives = 88/130 (67%), Gaps = 5/130 (3%)
 Frame = -1

Query: 597 LGYDLYGANINDMELNKYKDLDLPHAILVKKIYEEKRV----KPRSLKLKSPNMEIDDAT 430
           LGYDL+GAN NDMEL+KYK+L +P AILVKK YEEKR     KPRS KLKS NME+DD  
Sbjct: 375 LGYDLHGANSNDMELDKYKNLVIPEAILVKKSYEEKRQRKRGKPRSWKLKSLNMEVDDTR 434

Query: 429 KGGDNDLDNSDYEHFLKDLEEMPDLMSNLSLCPDGEIRPCESDSMADDECL-SFSLVHEF 253
             GD +  NS+YE FL+DLEE P+L  N+SL  + E +P E  SM D E + S  L    
Sbjct: 435 ARGDQEKMNSEYEQFLRDLEENPELRFNVSLYRNKEYQPSEMASMTDGEDIPSIPLEELL 494

Query: 252 DDLDIDG*ED 223
            DL+I+  ED
Sbjct: 495 ADLEINDAED 504


>ref|XP_004162315.1| PREDICTED: 60S ribosomal export protein NMD3-like [Cucumis sativus]
          Length = 505

 Score =  118 bits (295), Expect = 9e-25
 Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 4/124 (3%)
 Frame = -1

Query: 597 LGYDLYGANINDMELNKYKDLDLPHAILVKKIYEEKRV----KPRSLKLKSPNMEIDDAT 430
           LGYDLYGAN NDMEL KYK L+LP AIL+KK YEEKR     KPRS KLKS +M++DD T
Sbjct: 374 LGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSWKLKSLSMDVDDKT 433

Query: 429 KGGDNDLDNSDYEHFLKDLEEMPDLMSNLSLCPDGEIRPCESDSMADDECLSFSLVHEFD 250
           K  +N + NS+YE FL+DLEE PDL  N+SL  + E +P E     D    S  L     
Sbjct: 434 KVDENKM-NSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDGP--SVPLEELLA 490

Query: 249 DLDI 238
           DLD+
Sbjct: 491 DLDL 494


>ref|XP_004143504.1| PREDICTED: 60S ribosomal export protein NMD3-like [Cucumis sativus]
          Length = 505

 Score =  118 bits (295), Expect = 9e-25
 Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 4/124 (3%)
 Frame = -1

Query: 597 LGYDLYGANINDMELNKYKDLDLPHAILVKKIYEEKRV----KPRSLKLKSPNMEIDDAT 430
           LGYDLYGAN NDMEL KYK L+LP AIL+KK YEEKR     KPRS KLKS +M++DD T
Sbjct: 374 LGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKHGKPRSWKLKSLSMDVDDKT 433

Query: 429 KGGDNDLDNSDYEHFLKDLEEMPDLMSNLSLCPDGEIRPCESDSMADDECLSFSLVHEFD 250
           K  +N + NS+YE FL+DLEE PDL  N+SL  + E +P E     D    S  L     
Sbjct: 434 KVDENKM-NSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDGP--SVPLEELLA 490

Query: 249 DLDI 238
           DLD+
Sbjct: 491 DLDL 494


>ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3-like [Vitis vinifera]
          Length = 510

 Score =  117 bits (294), Expect = 1e-24
 Identities = 69/130 (53%), Positives = 83/130 (63%), Gaps = 5/130 (3%)
 Frame = -1

Query: 597 LGYDLYGANINDMELNKYKDLDLPHAILVKKIYEEKRV----KPRSLKLKSPNMEIDDAT 430
           LGYD+Y AN NDMEL KY+   LP AIL+KK YEEKR     KPRS KLKS NME+DD+ 
Sbjct: 374 LGYDVYAANSNDMELEKYRGFVLPEAILIKKSYEEKRQRKRGKPRSWKLKSLNMEVDDSK 433

Query: 429 KGGDNDLDNSDYEHFLKDLEEMPDLMSNLSLCPDGEIRPCESDSMADDECL-SFSLVHEF 253
              D +  N++YE FL+DLEE P+L  N+SL  + E +P E  SM D E L S  L    
Sbjct: 434 GRADQEKMNTEYEVFLRDLEEDPELRFNISLYRNKEYQPSEMASMTDGEDLPSVPLEELL 493

Query: 252 DDLDIDG*ED 223
            DLD+   ED
Sbjct: 494 ADLDLSEEED 503


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